BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst018g14 (837 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 585 e-163 dbj|AP003753.3| Oryza sativa (japonica cultivar-group) genomic D... 585 e-163 gb|AY104293.1| Zea mays PCO110259 mRNA sequence 436 e-119 dbj|AK058768.1| Oryza sativa (japonica cultivar-group) cDNA clon... 283 6e-73 emb|CT830890.1| Oryza sativa (indica cultivar-group) cDNA clone:... 167 9e-38 >dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 585 bits (295), Expect = e-163 Identities = 510/577 (88%), Gaps = 6/577 (1%) Strand = Plus / Plus Query: 218 aggtgcctccaacgcgtgccaaatcaccaaaattgacacggagaaagagctccagcgaca 277 ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 4568342 aggtgcctccaactcgtgccaaatcaccaaaattgacacggagaaagagctgcagcgata 4568401 Query: 278 cccctcatacaccagagggaggaaatggcaacgcagtatgttgccggttgcatcgtcaca 337 ||||||||||||||||||| |||||| | |||| |||||||||||| |||||||||| Sbjct: 4568402 cccctcatacaccagagggtaaaaatggaagtgcagcatgttgccggttacatcgtcaca 4568461 Query: 338 gcatcgggaactccaaagatggtaacagcagggcacagtgttcgccaaagagctctccga 397 | || |||||||||||||| | |||||||||| | || ||||| || ||||| |||| | Sbjct: 4568462 gtattgggaactccaaagaagttaacagcaggacccaatgttctccgaagagtgctccaa 4568521 Query: 398 agactggagtagctacaaaaaccagaacgaccaagtctgtcatgaagaatgtggggcagc 457 ||||||||||||| ||||| ||||| |||||||| ||||||||||||||||| ||| Sbjct: 4568522 agactggagtagccgcaaaacccagagcgaccaagggcgtcatgaagaatgtgggaaagc 4568581 Query: 458 caggtgctgcaaatgttgctgtacaaacctaactcatgagccattcccatccccctgcca 517 |||||||||| |||||||||||||||||||||||||||| |||||||||| ||| ||| | Sbjct: 4568582 caggtgctgcgaatgttgctgtacaaacctaactcatgatccattcccattcccgtgcaa 4568641 Query: 518 tttttcattttaatttatacctcacatcaccaaaagacggcctcatgtcccgacaacagt 577 |||||| |||||||||||||||||||| || | |||||| |||||||||||||||||| Sbjct: 4568642 tttttcgatttaatttatacctcacatcgcc-gatgacggcatcatgtcccgacaacagt 4568700 Query: 578 gtgtttgttgctggat--ttatttttgcattctccttgtaagaatcttggtaccgagacc 635 |||||||||||||||| || ||||||||||||||||||||||| |||||||| |||||| Sbjct: 4568701 gtgtttgttgctggattattttttttgcattctccttgtaagaaccttggtacagagacc 4568760 Query: 636 atgcgctgttctgtgttgtaaatttgttgagggtttttgtaa-ggagtaactgagtcagt 694 ||| | | ||| ||||||||||||||| |||| |||||||| || ||||| |||||||| Sbjct: 4568761 atgtggtattccgtgttgtaaatttgtcgagg--ttttgtaagggggtaaccgagtcagt 4568818 Query: 695 tctgtgagaactaatctggcagccgataagctgttggaatgacattgttgttgatgtatg 754 |||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 4568819 gctgtaagaactaatctggcagccgataggctgttggtgtgacattgttgttgatgtatg 4568878 Query: 755 gcggtgttcgcagatcctacggtattgtatgtaagca 791 |||| |||||||||||||| |||||||||| |||||| Sbjct: 4568879 gcggcgttcgcagatcctatggtattgtatttaagca 4568915 Score = 182 bits (92), Expect = 2e-42 Identities = 110/116 (94%) Strand = Plus / Plus Query: 107 aggaagagcaagaagaagctctaaaacaactaagaaagaacctggttattagagcaaaac 166 |||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||| Sbjct: 4567600 aggaagagcaagaagaagctctgaaacaactaaggaagaatctggttattagagcaaaac 4567659 Query: 167 ccatgccaagcttctaccaagagggacccccaccgaaggttgaacttaagaaggtg 222 |||||||||||||||| |||||||| |||||||| ||||||||||||||||||||| Sbjct: 4567660 ccatgccaagcttctatcaagagggtcccccacctaaggttgaacttaagaaggtg 4567715 Score = 93.7 bits (47), Expect = 1e-15 Identities = 68/75 (90%) Strand = Plus / Plus Query: 35 agttttacacaaaactggaagagaaacgcaaggctttggaagaggagaaacttgaagcag 94 |||||||||||||| ||||||| ||||||||||| ||||||||||||||||| ||||| | Sbjct: 4565873 agttttacacaaaattggaagaaaaacgcaaggccttggaagaggagaaactagaagctg 4565932 Query: 95 aggccaggaaaaagg 109 |||| || ||||||| Sbjct: 4565933 aggcaagaaaaaagg 4565947 >dbj|AP003753.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1339_B08 Length = 119212 Score = 585 bits (295), Expect = e-163 Identities = 510/577 (88%), Gaps = 6/577 (1%) Strand = Plus / Plus Query: 218 aggtgcctccaacgcgtgccaaatcaccaaaattgacacggagaaagagctccagcgaca 277 ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 33682 aggtgcctccaactcgtgccaaatcaccaaaattgacacggagaaagagctgcagcgata 33741 Query: 278 cccctcatacaccagagggaggaaatggcaacgcagtatgttgccggttgcatcgtcaca 337 ||||||||||||||||||| |||||| | |||| |||||||||||| |||||||||| Sbjct: 33742 cccctcatacaccagagggtaaaaatggaagtgcagcatgttgccggttacatcgtcaca 33801 Query: 338 gcatcgggaactccaaagatggtaacagcagggcacagtgttcgccaaagagctctccga 397 | || |||||||||||||| | |||||||||| | || ||||| || ||||| |||| | Sbjct: 33802 gtattgggaactccaaagaagttaacagcaggacccaatgttctccgaagagtgctccaa 33861 Query: 398 agactggagtagctacaaaaaccagaacgaccaagtctgtcatgaagaatgtggggcagc 457 ||||||||||||| ||||| ||||| |||||||| ||||||||||||||||| ||| Sbjct: 33862 agactggagtagccgcaaaacccagagcgaccaagggcgtcatgaagaatgtgggaaagc 33921 Query: 458 caggtgctgcaaatgttgctgtacaaacctaactcatgagccattcccatccccctgcca 517 |||||||||| |||||||||||||||||||||||||||| |||||||||| ||| ||| | Sbjct: 33922 caggtgctgcgaatgttgctgtacaaacctaactcatgatccattcccattcccgtgcaa 33981 Query: 518 tttttcattttaatttatacctcacatcaccaaaagacggcctcatgtcccgacaacagt 577 |||||| |||||||||||||||||||| || | |||||| |||||||||||||||||| Sbjct: 33982 tttttcgatttaatttatacctcacatcgcc-gatgacggcatcatgtcccgacaacagt 34040 Query: 578 gtgtttgttgctggat--ttatttttgcattctccttgtaagaatcttggtaccgagacc 635 |||||||||||||||| || ||||||||||||||||||||||| |||||||| |||||| Sbjct: 34041 gtgtttgttgctggattattttttttgcattctccttgtaagaaccttggtacagagacc 34100 Query: 636 atgcgctgttctgtgttgtaaatttgttgagggtttttgtaa-ggagtaactgagtcagt 694 ||| | | ||| ||||||||||||||| |||| |||||||| || ||||| |||||||| Sbjct: 34101 atgtggtattccgtgttgtaaatttgtcgagg--ttttgtaagggggtaaccgagtcagt 34158 Query: 695 tctgtgagaactaatctggcagccgataagctgttggaatgacattgttgttgatgtatg 754 |||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 34159 gctgtaagaactaatctggcagccgataggctgttggtgtgacattgttgttgatgtatg 34218 Query: 755 gcggtgttcgcagatcctacggtattgtatgtaagca 791 |||| |||||||||||||| |||||||||| |||||| Sbjct: 34219 gcggcgttcgcagatcctatggtattgtatttaagca 34255 Score = 182 bits (92), Expect = 2e-42 Identities = 110/116 (94%) Strand = Plus / Plus Query: 107 aggaagagcaagaagaagctctaaaacaactaagaaagaacctggttattagagcaaaac 166 |||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||| Sbjct: 32940 aggaagagcaagaagaagctctgaaacaactaaggaagaatctggttattagagcaaaac 32999 Query: 167 ccatgccaagcttctaccaagagggacccccaccgaaggttgaacttaagaaggtg 222 |||||||||||||||| |||||||| |||||||| ||||||||||||||||||||| Sbjct: 33000 ccatgccaagcttctatcaagagggtcccccacctaaggttgaacttaagaaggtg 33055 Score = 93.7 bits (47), Expect = 1e-15 Identities = 68/75 (90%) Strand = Plus / Plus Query: 35 agttttacacaaaactggaagagaaacgcaaggctttggaagaggagaaacttgaagcag 94 |||||||||||||| ||||||| ||||||||||| ||||||||||||||||| ||||| | Sbjct: 31213 agttttacacaaaattggaagaaaaacgcaaggccttggaagaggagaaactagaagctg 31272 Query: 95 aggccaggaaaaagg 109 |||| || ||||||| Sbjct: 31273 aggcaagaaaaaagg 31287 >gb|AY104293.1| Zea mays PCO110259 mRNA sequence Length = 1582 Score = 436 bits (220), Expect = e-119 Identities = 343/384 (89%) Strand = Plus / Plus Query: 7 tgtggtaatcgtattgagaagaggggggagttttacacaaaactggaagagaaacgcaag 66 |||| ||||||| ||||||||| || ||||||||||||||| | ||||| ||||||||| Sbjct: 649 tgtgctaatcgtgctgagaagagaggagagttttacacaaaattagaagaaaaacgcaag 708 Query: 67 gctttggaagaggagaaacttgaagcagaggccaggaaaaaggaagagcaagaagaagct 126 |||||||||||||||||||| ||||||||||||| || | ||||||| ||||||||||| Sbjct: 709 gctttggaagaggagaaactccaagcagaggccagaaagagggaagaggaagaagaagct 768 Query: 127 ctaaaacaactaagaaagaacctggttattagagcaaaacccatgccaagcttctaccaa 186 |||| |||||| | |||||| |||| | ||||||||||||||||||||||||||||| Sbjct: 769 ctaagacaactgatgaagaacttggtcgtccgagcaaaacccatgccaagcttctaccaa 828 Query: 187 gagggacccccaccgaaggttgaacttaagaaggtgcctccaacgcgtgccaaatcacca 246 |||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 829 gagggacccccaccaaaggttgaacttaagaaggtgcctccaactcgtgccaagtcacca 888 Query: 247 aaattgacacggagaaagagctccagcgacacccctcatacaccagagggaggaaatggc 306 |||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||| Sbjct: 889 aaattgacacggagaaagagctgcagtgaaacccctcatacaccagagggaggaaatggc 948 Query: 307 aacgcagtatgttgccggttgcatcgtcacagcatcgggaactccaaagatggtaacagc 366 | |||||||| |||||||||||||| |||||||| |||||| ||| ||||| || |||| Sbjct: 949 agtgcagtatgctgccggttgcatcgccacagcattgggaacgccagagatgttagcagc 1008 Query: 367 agggcacagtgttcgccaaagagc 390 | |||||| ||||| ||||||||| Sbjct: 1009 aaggcacaatgttctccaaagagc 1032 Score = 91.7 bits (46), Expect = 4e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 475 gctgtacaaacctaactcatgagccattcccatccccctgccatttttcattttaattta 534 |||||||||||||||||||| || ||||| | || |||||||||||||||||||||| Sbjct: 1135 gctgtacaaacctaactcatcaggcattcactcccatatgccatttttcattttaattta 1194 Query: 535 tacctcacatcaccaaaa 552 |||||||||||||||||| Sbjct: 1195 tacctcacatcaccaaaa 1212 >dbj|AK058768.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-E11, full insert sequence Length = 288 Score = 283 bits (143), Expect = 6e-73 Identities = 241/269 (89%), Gaps = 6/269 (2%) Strand = Plus / Plus Query: 526 tttaatttatacctcacatcaccaaaagacggcctcatgtcccgacaacagtgtgtttgt 585 |||||||||||||||||||| || | |||||| |||||||||||||||||||||||||| Sbjct: 6 tttaatttatacctcacatcgccgat-gacggcatcatgtcccgacaacagtgtgtttgt 64 Query: 586 tgctggatt--tatttttgcattctccttgtaagaatcttggtaccgagaccatgcgctg 643 ||||||||| | ||||||||||||||||||||||| |||||||| ||||||||| | | Sbjct: 65 tgctggattattttttttgcattctccttgtaagaaccttggtacagagaccatgtggta 124 Query: 644 ttctgtgttgtaaatttgttgagggtttttgtaaggag-taactgagtcagttctgtgag 702 ||| ||||||||||||||| |||| |||||||||| | |||| |||||||| |||| || Sbjct: 125 ttccgtgttgtaaatttgtcgagg--ttttgtaagggggtaaccgagtcagtgctgtaag 182 Query: 703 aactaatctggcagccgataagctgttggaatgacattgttgttgatgtatggcggtgtt 762 |||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||| Sbjct: 183 aactaatctggcagccgataggctgttggtgtgacattgttgttgatgtatggcggcgtt 242 Query: 763 cgcagatcctacggtattgtatgtaagca 791 ||||||||||| |||||||||| |||||| Sbjct: 243 cgcagatcctatggtattgtatttaagca 271 >emb|CT830890.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA114I07, full insert sequence Length = 1448 Score = 167 bits (84), Expect = 9e-38 Identities = 183/216 (84%) Strand = Plus / Plus Query: 33 ggagttttacacaaaactggaagagaaacgcaaggctttggaagaggagaaacttgaagc 92 |||||| ||||||||| | |||||||||| |||||| ||||||| ||||| ||| || Sbjct: 762 ggagttctacacaaaattagaagagaaacacaaggccttggaagctgagaagaatgaggc 821 Query: 93 agaggccaggaaaaaggaagagcaagaagaagctctaaaacaactaagaaagaacctggt 152 |||||| |||||||||||||||||||| ||| ||||||||||||||||| | | || Sbjct: 822 cgaggcccggaaaaaggaagagcaagaaacagccttaaaacaactaagaaagtccttagt 881 Query: 153 tattagagcaaaacccatgccaagcttctaccaagagggacccccaccgaaggttgaact 212 || || ||||| ||||||||||||||||||||||| ||||| || || |||| |||||| Sbjct: 882 catcagggcaaagcccatgccaagcttctaccaagaaggacctcctccaaaggctgaact 941 Query: 213 taagaaggtgcctccaacgcgtgccaaatcaccaaa 248 ||||||||| |||||||| ||||| ||||||||||| Sbjct: 942 taagaaggtccctccaactcgtgctaaatcaccaaa 977