BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst018e07 (1404 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 222 3e-54 dbj|AP003105.2| Oryza sativa (japonica cultivar-group) genomic D... 222 3e-54 ref|NM_001048862.1| Oryza sativa (japonica cultivar-group) Os01g... 212 3e-51 dbj|AK242176.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 196 2e-46 ref|NM_001061426.1| Oryza sativa (japonica cultivar-group) Os05g... 196 2e-46 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 222 bits (112), Expect = 3e-54 Identities = 142/152 (93%) Strand = Plus / Plus Query: 173 gatcgatgaaggtgctctgctccgcgtgcgaggcggccgaggcgcgcgtgctctgctgcg 232 |||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 5638822 gatcgatgaaggtgctgtgctccgcgtgcgaggcggcggaggcgcgggtgctctgctgcg 5638881 Query: 233 ccgacgaggccgccctctgcgcgcgctgcgaccgcgacgtacacgccgcaaaccgcctcg 292 ||||||| ||||||||||||||||||||||||| | |||| |||||||| |||||||||| Sbjct: 5638882 ccgacgacgccgccctctgcgcgcgctgcgacctccacgtccacgccgccaaccgcctcg 5638941 Query: 293 ctggcaagcaccaccgcctgcccctcctctcc 324 | ||||||||||||||||| |||||||||||| Sbjct: 5638942 ccggcaagcaccaccgcctccccctcctctcc 5638973 Score = 153 bits (77), Expect = 2e-33 Identities = 131/149 (87%) Strand = Plus / Plus Query: 361 tgcgacatatgccaggagtgccacgcctacttcttctgcgtcgaggaccgcgcgctgctc 420 |||||||| |||||||| ||||||||||||||||||||||||||||||||| || ||| Sbjct: 5639010 tgcgacatctgccaggacgcccacgcctacttcttctgcgtcgaggaccgcgccctcctc 5639069 Query: 421 tgccggagctgcgacgtcgccgtgcacgccgccaacgccttcgtctccgcgcaccggagg 480 ||||| ||||||||||||||| ||| ||||||||||| |||||||||| ||||| | Sbjct: 5639070 tgccgcgcctgcgacgtcgccgtccacaccgccaacgccctcgtctccgcccaccgccgc 5639129 Query: 481 ttcctcctcaccggggtccaggtcggcct 509 |||||||||||||| ||||| |||||||| Sbjct: 5639130 ttcctcctcaccggcgtccacgtcggcct 5639158 Score = 139 bits (70), Expect = 3e-29 Identities = 161/190 (84%), Gaps = 6/190 (3%) Strand = Plus / Plus Query: 981 ccaggacttctttggccaggtgccggaggtccactggtccgtgccggagctcccctcccc 1040 |||||||||||| |||||||||||||| || |||||| ||||||||||||||||||| || Sbjct: 5639873 ccaggacttcttcggccaggtgccggaagttcactgggccgtgccggagctcccctcgcc 5639932 Query: 1041 gcccacggcctcagggctccactggcaggggaactcacattacggcgccagtggcgccac 1100 ||||||||| ||||||||||||||||| || || | | ||||| | | |||||||| Sbjct: 5639933 gcccacggcgtcagggctccactggcaacgggacccgcgctacggtg---gcggcgccac 5639989 Query: 1101 cgacacc---gcgttgttcgtgccggacatatgctccccggagaaccccttccggtgctt 1157 |||| || ||| |||||||||||||||| | ||| ||||||||||||||||| ||||| Sbjct: 5639990 cgacgccagcgcggtgttcgtgccggacatctcctcgccggagaaccccttccgttgctt 5640049 Query: 1158 ccccaccgcc 1167 | || ||||| Sbjct: 5640050 cgccgccgcc 5640059 Score = 85.7 bits (43), Expect = 4e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 820 gactggccactgaacgaattcttcggcttcgccgagttcaacgccggcttcgggttcgcg 879 |||||||| || ||||| ||||||||||||||||| |||| | |||||||||| ||||| Sbjct: 5639487 gactggccgctcaacgagttcttcggcttcgccgacttcagctccggcttcggcttcgcc 5639546 Query: 880 gagaatggcacgtccaagg 898 ||||| ||||||||||||| Sbjct: 5639547 gagaacggcacgtccaagg 5639565 >dbj|AP003105.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489A05 Length = 158815 Score = 222 bits (112), Expect = 3e-54 Identities = 142/152 (93%) Strand = Plus / Plus Query: 173 gatcgatgaaggtgctctgctccgcgtgcgaggcggccgaggcgcgcgtgctctgctgcg 232 |||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 104295 gatcgatgaaggtgctgtgctccgcgtgcgaggcggcggaggcgcgggtgctctgctgcg 104354 Query: 233 ccgacgaggccgccctctgcgcgcgctgcgaccgcgacgtacacgccgcaaaccgcctcg 292 ||||||| ||||||||||||||||||||||||| | |||| |||||||| |||||||||| Sbjct: 104355 ccgacgacgccgccctctgcgcgcgctgcgacctccacgtccacgccgccaaccgcctcg 104414 Query: 293 ctggcaagcaccaccgcctgcccctcctctcc 324 | ||||||||||||||||| |||||||||||| Sbjct: 104415 ccggcaagcaccaccgcctccccctcctctcc 104446 Score = 153 bits (77), Expect = 2e-33 Identities = 131/149 (87%) Strand = Plus / Plus Query: 361 tgcgacatatgccaggagtgccacgcctacttcttctgcgtcgaggaccgcgcgctgctc 420 |||||||| |||||||| ||||||||||||||||||||||||||||||||| || ||| Sbjct: 104483 tgcgacatctgccaggacgcccacgcctacttcttctgcgtcgaggaccgcgccctcctc 104542 Query: 421 tgccggagctgcgacgtcgccgtgcacgccgccaacgccttcgtctccgcgcaccggagg 480 ||||| ||||||||||||||| ||| ||||||||||| |||||||||| ||||| | Sbjct: 104543 tgccgcgcctgcgacgtcgccgtccacaccgccaacgccctcgtctccgcccaccgccgc 104602 Query: 481 ttcctcctcaccggggtccaggtcggcct 509 |||||||||||||| ||||| |||||||| Sbjct: 104603 ttcctcctcaccggcgtccacgtcggcct 104631 Score = 139 bits (70), Expect = 3e-29 Identities = 161/190 (84%), Gaps = 6/190 (3%) Strand = Plus / Plus Query: 981 ccaggacttctttggccaggtgccggaggtccactggtccgtgccggagctcccctcccc 1040 |||||||||||| |||||||||||||| || |||||| ||||||||||||||||||| || Sbjct: 105346 ccaggacttcttcggccaggtgccggaagttcactgggccgtgccggagctcccctcgcc 105405 Query: 1041 gcccacggcctcagggctccactggcaggggaactcacattacggcgccagtggcgccac 1100 ||||||||| ||||||||||||||||| || || | | ||||| | | |||||||| Sbjct: 105406 gcccacggcgtcagggctccactggcaacgggacccgcgctacggtg---gcggcgccac 105462 Query: 1101 cgacacc---gcgttgttcgtgccggacatatgctccccggagaaccccttccggtgctt 1157 |||| || ||| |||||||||||||||| | ||| ||||||||||||||||| ||||| Sbjct: 105463 cgacgccagcgcggtgttcgtgccggacatctcctcgccggagaaccccttccgttgctt 105522 Query: 1158 ccccaccgcc 1167 | || ||||| Sbjct: 105523 cgccgccgcc 105532 Score = 85.7 bits (43), Expect = 4e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 820 gactggccactgaacgaattcttcggcttcgccgagttcaacgccggcttcgggttcgcg 879 |||||||| || ||||| ||||||||||||||||| |||| | |||||||||| ||||| Sbjct: 104960 gactggccgctcaacgagttcttcggcttcgccgacttcagctccggcttcggcttcgcc 105019 Query: 880 gagaatggcacgtccaagg 898 ||||| ||||||||||||| Sbjct: 105020 gagaacggcacgtccaagg 105038 >ref|NM_001048862.1| Oryza sativa (japonica cultivar-group) Os01g0202500 (Os01g0202500) mRNA, complete cds Length = 1074 Score = 212 bits (107), Expect = 3e-51 Identities = 137/147 (93%) Strand = Plus / Plus Query: 178 atgaaggtgctctgctccgcgtgcgaggcggccgaggcgcgcgtgctctgctgcgccgac 237 ||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 1 atgaaggtgctgtgctccgcgtgcgaggcggcggaggcgcgggtgctctgctgcgccgac 60 Query: 238 gaggccgccctctgcgcgcgctgcgaccgcgacgtacacgccgcaaaccgcctcgctggc 297 || ||||||||||||||||||||||||| | |||| |||||||| ||||||||||| ||| Sbjct: 61 gacgccgccctctgcgcgcgctgcgacctccacgtccacgccgccaaccgcctcgccggc 120 Query: 298 aagcaccaccgcctgcccctcctctcc 324 |||||||||||||| |||||||||||| Sbjct: 121 aagcaccaccgcctccccctcctctcc 147 Score = 153 bits (77), Expect = 2e-33 Identities = 131/149 (87%) Strand = Plus / Plus Query: 361 tgcgacatatgccaggagtgccacgcctacttcttctgcgtcgaggaccgcgcgctgctc 420 |||||||| |||||||| ||||||||||||||||||||||||||||||||| || ||| Sbjct: 184 tgcgacatctgccaggacgcccacgcctacttcttctgcgtcgaggaccgcgccctcctc 243 Query: 421 tgccggagctgcgacgtcgccgtgcacgccgccaacgccttcgtctccgcgcaccggagg 480 ||||| ||||||||||||||| ||| ||||||||||| |||||||||| ||||| | Sbjct: 244 tgccgcgcctgcgacgtcgccgtccacaccgccaacgccctcgtctccgcccaccgccgc 303 Query: 481 ttcctcctcaccggggtccaggtcggcct 509 |||||||||||||| ||||| |||||||| Sbjct: 304 ttcctcctcaccggcgtccacgtcggcct 332 Score = 139 bits (70), Expect = 3e-29 Identities = 161/190 (84%), Gaps = 6/190 (3%) Strand = Plus / Plus Query: 981 ccaggacttctttggccaggtgccggaggtccactggtccgtgccggagctcccctcccc 1040 |||||||||||| |||||||||||||| || |||||| ||||||||||||||||||| || Sbjct: 846 ccaggacttcttcggccaggtgccggaagttcactgggccgtgccggagctcccctcgcc 905 Query: 1041 gcccacggcctcagggctccactggcaggggaactcacattacggcgccagtggcgccac 1100 ||||||||| ||||||||||||||||| || || | | ||||| | | |||||||| Sbjct: 906 gcccacggcgtcagggctccactggcaacgggacccgcgctacggtg---gcggcgccac 962 Query: 1101 cgacacc---gcgttgttcgtgccggacatatgctccccggagaaccccttccggtgctt 1157 |||| || ||| |||||||||||||||| | ||| ||||||||||||||||| ||||| Sbjct: 963 cgacgccagcgcggtgttcgtgccggacatctcctcgccggagaaccccttccgttgctt 1022 Query: 1158 ccccaccgcc 1167 | || ||||| Sbjct: 1023 cgccgccgcc 1032 Score = 127 bits (64), Expect = 1e-25 Identities = 106/120 (88%) Strand = Plus / Plus Query: 820 gactggccactgaacgaattcttcggcttcgccgagttcaacgccggcttcgggttcgcg 879 |||||||| || ||||| ||||||||||||||||| |||| | |||||||||| ||||| Sbjct: 661 gactggccgctcaacgagttcttcggcttcgccgacttcagctccggcttcggcttcgcc 720 Query: 880 gagaatggcacgtccaaggccgacagcgccaagctcgggagcaccgacggctcgccgaac 939 ||||| |||||||||||||| ||||||| |||| ||||||||| ||||||||||||||| Sbjct: 721 gagaacggcacgtccaaggcggacagcggcaagatcgggagcatggacggctcgccgaac 780 >dbj|AK242176.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J075159I15, full insert sequence Length = 1445 Score = 196 bits (99), Expect = 2e-46 Identities = 126/135 (93%) Strand = Plus / Plus Query: 190 tgctccgcgtgcgaggcggccgaggcgcgcgtgctctgctgcgccgacgaggccgccctc 249 |||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||| Sbjct: 9 tgctccgcgtgcgaggcggcggaggcgcgggtgctctgctgcgccgacgacgccgccctc 68 Query: 250 tgcgcgcgctgcgaccgcgacgtacacgccgcaaaccgcctcgctggcaagcaccaccgc 309 |||||||||||||||| | |||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 69 tgcgcgcgctgcgacctccacgtccacgccgccaaccgcctcgccggcaagcaccaccgc 128 Query: 310 ctgcccctcctctcc 324 || |||||||||||| Sbjct: 129 ctccccctcctctcc 143 Score = 153 bits (77), Expect = 2e-33 Identities = 131/149 (87%) Strand = Plus / Plus Query: 361 tgcgacatatgccaggagtgccacgcctacttcttctgcgtcgaggaccgcgcgctgctc 420 |||||||| |||||||| ||||||||||||||||||||||||||||||||| || ||| Sbjct: 180 tgcgacatctgccaggacgcccacgcctacttcttctgcgtcgaggaccgcgccctcctc 239 Query: 421 tgccggagctgcgacgtcgccgtgcacgccgccaacgccttcgtctccgcgcaccggagg 480 ||||| ||||||||||||||| ||| ||||||||||| |||||||||| ||||| | Sbjct: 240 tgccgcgcctgcgacgtcgccgtccacaccgccaacgccctcgtctccgcccaccgccgc 299 Query: 481 ttcctcctcaccggggtccaggtcggcct 509 |||||||||||||| ||||| |||||||| Sbjct: 300 ttcctcctcaccggcgtccacgtcggcct 328 Score = 139 bits (70), Expect = 3e-29 Identities = 161/190 (84%), Gaps = 6/190 (3%) Strand = Plus / Plus Query: 981 ccaggacttctttggccaggtgccggaggtccactggtccgtgccggagctcccctcccc 1040 |||||||||||| |||||||||||||| || |||||| ||||||||||||||||||| || Sbjct: 842 ccaggacttcttcggccaggtgccggaagttcactgggccgtgccggagctcccctcgcc 901 Query: 1041 gcccacggcctcagggctccactggcaggggaactcacattacggcgccagtggcgccac 1100 ||||||||| ||||||||||||||||| || || | | ||||| | | |||||||| Sbjct: 902 gcccacggcgtcagggctccactggcaacgggacccgcgctacggtg---gcggcgccac 958 Query: 1101 cgacacc---gcgttgttcgtgccggacatatgctccccggagaaccccttccggtgctt 1157 |||| || ||| |||||||||||||||| | ||| ||||||||||||||||| ||||| Sbjct: 959 cgacgccagcgcggtgttcgtgccggacatctcctcgccggagaaccccttccgttgctt 1018 Query: 1158 ccccaccgcc 1167 | || ||||| Sbjct: 1019 cgccgccgcc 1028 Score = 127 bits (64), Expect = 1e-25 Identities = 106/120 (88%) Strand = Plus / Plus Query: 820 gactggccactgaacgaattcttcggcttcgccgagttcaacgccggcttcgggttcgcg 879 |||||||| || ||||| ||||||||||||||||| |||| | |||||||||| ||||| Sbjct: 657 gactggccgctcaacgagttcttcggcttcgccgacttcagctccggcttcggcttcgcc 716 Query: 880 gagaatggcacgtccaaggccgacagcgccaagctcgggagcaccgacggctcgccgaac 939 ||||| |||||||||||||| ||||||| |||| ||||||||| ||||||||||||||| Sbjct: 717 gagaacggcacgtccaaggcggacagcggcaagatcgggagcatggacggctcgccgaac 776 >ref|NM_001061426.1| Oryza sativa (japonica cultivar-group) Os05g0204600 (Os05g0204600) mRNA, complete cds Length = 2058 Score = 196 bits (99), Expect = 2e-46 Identities = 144/159 (90%) Strand = Plus / Plus Query: 348 gtcggcgccaaagtgcgacatatgccaggagtgccacgcctacttcttctgcgtcgagga 407 |||| |||| ||||||||||||||||||||| ||||||| |||||||||||| ||||||| Sbjct: 430 gtcgccgcccaagtgcgacatatgccaggagagccacgcgtacttcttctgcctcgagga 489 Query: 408 ccgcgcgctgctctgccggagctgcgacgtcgccgtgcacgccgccaacgccttcgtctc 467 |||||||||||| ||||||||||||||||| || |||||| | ||||||||||||||||| Sbjct: 490 ccgcgcgctgctgtgccggagctgcgacgtggcggtgcacacggccaacgccttcgtctc 549 Query: 468 cgcgcaccggaggttcctcctcaccggggtccaggtcgg 506 ||||||||| | |||||||||||||| || |||||||| Sbjct: 550 cgcgcaccgccgtttcctcctcaccggcgtgcaggtcgg 588 Score = 172 bits (87), Expect = 2e-39 Identities = 126/139 (90%) Strand = Plus / Plus Query: 195 cgcgtgcgaggcggccgaggcgcgcgtgctctgctgcgccgacgaggccgccctctgcgc 254 ||||||||||||||| ||||| |||| |||||||||||||||||||||||||| ||||| Sbjct: 250 cgcgtgcgaggcggcggaggccagcgtcctctgctgcgccgacgaggccgccctgtgcgc 309 Query: 255 gcgctgcgaccgcgacgtacacgccgcaaaccgcctcgctggcaagcaccaccgcctgcc 314 |||||||||||||||| | |||||||| ||||||||||| || ||||||| |||||| || Sbjct: 310 gcgctgcgaccgcgacatccacgccgccaaccgcctcgccgggaagcacctccgcctccc 369 Query: 315 cctcctctcccccgcctcc 333 |||||||||||||||||| Sbjct: 370 tctcctctcccccgcctcc 388