BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst018e05 (761 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|X15290.1|HVDHN3 Zea mays mRNA for dehydrin (dhn1 gene) 258 3e-65 gb|DQ245874.1| Zea mays clone 21483 mRNA sequence 242 2e-60 ref|NM_001074374.1| Oryza sativa (japonica cultivar-group) Os11g... 242 2e-60 dbj|AK071366.1| Oryza sativa (japonica cultivar-group) cDNA clon... 242 2e-60 gb|AY104757.1| Zea mays PCO142314 mRNA sequence 242 2e-60 >emb|X15290.1|HVDHN3 Zea mays mRNA for dehydrin (dhn1 gene) Length = 852 Score = 258 bits (130), Expect = 3e-65 Identities = 192/212 (90%), Gaps = 3/212 (1%) Strand = Plus / Plus Query: 190 ggcgggcagttccaaccggcgagggaggagcacaagaccggaggcatcctgcagcgctcc 249 |||||||||||||| || ||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 261 ggcgggcagttccagcctgcgagggaggagcacaagaccggcggcatcctgcatcgctcc 320 Query: 250 ggcagctccagctccagctcgtcttctgaggacgacggcatgggcgggaggaggaagaag 309 ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 321 ggcagctccagctccagctcgtcg---gaggacgacggcatgggcggaaggaggaagaag 377 Query: 310 ggcatcaaggagaagatcaaggagaagctccccggcggccacaaggacgagcagcaccag 369 || |||||||||||||||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 378 ggaatcaaggagaagatcaaggagaagctgcccggaggccacaaggacgaccagcacgcc 437 Query: 370 actacggcgacaggcggcgcctacgggcagca 401 || || |||| |||||||||||||||||||| Sbjct: 438 acggcgacgaccggcggcgcctacgggcagca 469 Score = 93.7 bits (47), Expect = 1e-15 Identities = 62/67 (92%) Strand = Plus / Plus Query: 446 agggcaccggcgagaagaagggcctcatggacaagatcaaggagaagctgcccggccagc 505 ||||||||||||||||||| ||| | |||||||||||||| |||||||||||||| |||| Sbjct: 535 agggcaccggcgagaagaaaggcattatggacaagatcaaagagaagctgcccggacagc 594 Query: 506 actgagc 512 ||||||| Sbjct: 595 actgagc 601 >gb|DQ245874.1| Zea mays clone 21483 mRNA sequence Length = 804 Score = 242 bits (122), Expect = 2e-60 Identities = 190/212 (89%), Gaps = 3/212 (1%) Strand = Plus / Plus Query: 190 ggcgggcagttccaaccggcgagggaggagcacaagaccggaggcatcctgcagcgctcc 249 |||||||||||||| || ||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 268 ggcgggcagttccagcctgcgagggaggagcacaagaccggcggcatcctgcatcgctcc 327 Query: 250 ggcagctccagctccagctcgtcttctgaggacgacggcatgggcgggaggaggaagaag 309 ||||||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 328 ggcagctccagctccagctcg---tcggaggacgacggcatgggcggaaggaggaagaag 384 Query: 310 ggcatcaaggagaagatcaaggagaagctccccggcggccacaaggacgagcagcaccag 369 || ||||||||||||||||| |||||||| ||||| |||||||||||||| |||||| Sbjct: 385 ggaatcaaggagaagatcaaagagaagctgcccggaggccacaaggacgaccagcacgcc 444 Query: 370 actacggcgacaggcggcgcctacgggcagca 401 || || |||| ||||||||||| |||||||| Sbjct: 445 acggcgacgaccggcggcgcctatgggcagca 476 Score = 101 bits (51), Expect = 4e-18 Identities = 63/67 (94%) Strand = Plus / Plus Query: 446 agggcaccggcgagaagaagggcctcatggacaagatcaaggagaagctgcccggccagc 505 ||||||||||||||||||| ||| | ||||||||||||||||||||||||||||| |||| Sbjct: 542 agggcaccggcgagaagaaaggcattatggacaagatcaaggagaagctgcccggacagc 601 Query: 506 actgagc 512 ||||||| Sbjct: 602 actgagc 608 >ref|NM_001074374.1| Oryza sativa (japonica cultivar-group) Os11g0454000 (Os11g0454000) mRNA, complete cds Length = 794 Score = 242 bits (122), Expect = 2e-60 Identities = 158/170 (92%) Strand = Plus / Plus Query: 186 cgccggcgggcagttccaaccggcgagggaggagcacaagaccggaggcatcctgcagcg 245 |||||||||||||||||| |||| || |||||||||||||||||| |||||||| || || Sbjct: 221 cgccggcgggcagttccagccggtgaaggaggagcacaagaccggcggcatcctccaccg 280 Query: 246 ctccggcagctccagctccagctcgtcttctgaggacgacggcatgggcgggaggaggaa 305 |||||||||||| |||||||||||||| |||||||||||||| ||||| ||||||||||| Sbjct: 281 ctccggcagctcaagctccagctcgtcgtctgaggacgacgggatgggagggaggaggaa 340 Query: 306 gaagggcatcaaggagaagatcaaggagaagctccccggcggccacaagg 355 |||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 341 gaagggaatcaaggagaagatcaaggagaagctccccggcggcaacaagg 390 Score = 93.7 bits (47), Expect = 1e-15 Identities = 56/59 (94%) Strand = Plus / Plus Query: 450 caccggcgagaagaagggcctcatggacaagatcaaggagaagctgcccggccagcact 508 ||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||| Sbjct: 512 caccggcgagaagaagggcttcatggacaagatcaaggaaaagcttcccggccagcact 570 >dbj|AK071366.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023096D05, full insert sequence Length = 795 Score = 242 bits (122), Expect = 2e-60 Identities = 158/170 (92%) Strand = Plus / Plus Query: 186 cgccggcgggcagttccaaccggcgagggaggagcacaagaccggaggcatcctgcagcg 245 |||||||||||||||||| |||| || |||||||||||||||||| |||||||| || || Sbjct: 222 cgccggcgggcagttccagccggtgaaggaggagcacaagaccggcggcatcctccaccg 281 Query: 246 ctccggcagctccagctccagctcgtcttctgaggacgacggcatgggcgggaggaggaa 305 |||||||||||| |||||||||||||| |||||||||||||| ||||| ||||||||||| Sbjct: 282 ctccggcagctcaagctccagctcgtcgtctgaggacgacgggatgggagggaggaggaa 341 Query: 306 gaagggcatcaaggagaagatcaaggagaagctccccggcggccacaagg 355 |||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 342 gaagggaatcaaggagaagatcaaggagaagctccccggcggcaacaagg 391 Score = 93.7 bits (47), Expect = 1e-15 Identities = 56/59 (94%) Strand = Plus / Plus Query: 450 caccggcgagaagaagggcctcatggacaagatcaaggagaagctgcccggccagcact 508 ||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||| Sbjct: 513 caccggcgagaagaagggcttcatggacaagatcaaggaaaagcttcccggccagcact 571 >gb|AY104757.1| Zea mays PCO142314 mRNA sequence Length = 899 Score = 242 bits (122), Expect = 2e-60 Identities = 190/212 (89%), Gaps = 3/212 (1%) Strand = Plus / Plus Query: 190 ggcgggcagttccaaccggcgagggaggagcacaagaccggaggcatcctgcagcgctcc 249 |||||||||||||| || ||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 258 ggcgggcagttccagcctgcgagggaggagcacaagaccggcggcatcctgcatcgctcc 317 Query: 250 ggcagctccagctccagctcgtcttctgaggacgacggcatgggcgggaggaggaagaag 309 ||||||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 318 ggcagctccagctccagctcg---tcggaggacgacggcatgggcggaaggaggaagaag 374 Query: 310 ggcatcaaggagaagatcaaggagaagctccccggcggccacaaggacgagcagcaccag 369 || ||||||||||||||||| |||||||| ||||| |||||||||||||| |||||| Sbjct: 375 ggaatcaaggagaagatcaaagagaagctgcccggaggccacaaggacgaccagcacgcc 434 Query: 370 actacggcgacaggcggcgcctacgggcagca 401 || || |||| ||||||||||| |||||||| Sbjct: 435 acggcgacgaccggcggcgcctatgggcagca 466 Score = 93.7 bits (47), Expect = 1e-15 Identities = 62/67 (92%) Strand = Plus / Plus Query: 446 agggcaccggcgagaagaagggcctcatggacaagatcaaggagaagctgcccggccagc 505 ||||||||||||||||||| ||| | |||||||||||||| |||||||||||||| |||| Sbjct: 532 agggcaccggcgagaagaaaggcattatggacaagatcaaagagaagctgcccggacagc 591 Query: 506 actgagc 512 ||||||| Sbjct: 592 actgagc 598