BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst018c14 (835 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 gen... 345 2e-91 dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 345 2e-91 ref|NM_001060047.1| Oryza sativa (japonica cultivar-group) Os04g... 194 4e-46 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 194 4e-46 emb|AL606633.3|OSJN00060 Oryza sativa genomic DNA, chromosome 4,... 194 4e-46 >gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete sequence Length = 135510 Score = 345 bits (174), Expect = 2e-91 Identities = 249/274 (90%) Strand = Plus / Minus Query: 278 gacgaacgggtggtacggcaagtgcccgacggacgcgctgaagctgggcgtgtgcgcgaa 337 ||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 67095 gacgagcgggtggtacgggaagtgcccgacggacgcgctgaagctgggggtgtgcgcgaa 67036 Query: 338 cgtgctggacctgatcaaggcgaaggccggcgtgccggcgacggagccgtgctgcccgct 397 ||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 67035 cgtgctggacctgataaaggcgaaggcgggggtgccggcgacggagccgtgctgcccgct 66976 Query: 398 gctcaacgggctcgtcgaccttgaggcggccgtctgcctctgcaccgccatcaaggccac 457 ||| |||||||| || ||||| |||||||| || ||||| ||||| ||||||||||||| Sbjct: 66975 gctgaacgggctggtggacctggaggcggcggtgtgcctgtgcacggccatcaaggccaa 66916 Query: 458 cgtgctggggcttaacctcaacatccctatccatctcagcctcatactcaacttctgcgg 517 ||||||||| | ||||||||| |||| ||||| ||||||||||| |||||||||||||| Sbjct: 66915 cgtgctgggcatcaacctcaacctccccatccacctcagcctcatcctcaacttctgcgg 66856 Query: 518 caagggtgttcccaccggcttcatgtgcgcttaa 551 |||||| || |||||||||||||||||| ||||| Sbjct: 66855 caagggcgtccccaccggcttcatgtgctcttaa 66822 Score = 77.8 bits (39), Expect = 6e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 58 cgtccagggccacagcttcctgtgccctcttccttgccctcaacctcctcctctt 112 |||||||||| | |||||||||||||||||||| |||||||||||||||||||| Sbjct: 67318 cgtccagggcgtcggcttcctgtgccctcttcctcgccctcaacctcctcctctt 67264 >dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 345 bits (174), Expect = 2e-91 Identities = 249/274 (90%) Strand = Plus / Plus Query: 278 gacgaacgggtggtacggcaagtgcccgacggacgcgctgaagctgggcgtgtgcgcgaa 337 ||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 21267264 gacgagcgggtggtacgggaagtgcccgacggacgcgctgaagctgggggtgtgcgcgaa 21267323 Query: 338 cgtgctggacctgatcaaggcgaaggccggcgtgccggcgacggagccgtgctgcccgct 397 ||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 21267324 cgtgctggacctgataaaggcgaaggcgggggtgccggcgacggagccgtgctgcccgct 21267383 Query: 398 gctcaacgggctcgtcgaccttgaggcggccgtctgcctctgcaccgccatcaaggccac 457 ||| |||||||| || ||||| |||||||| || ||||| ||||| ||||||||||||| Sbjct: 21267384 gctgaacgggctggtggacctggaggcggcggtgtgcctgtgcacggccatcaaggccaa 21267443 Query: 458 cgtgctggggcttaacctcaacatccctatccatctcagcctcatactcaacttctgcgg 517 ||||||||| | ||||||||| |||| ||||| ||||||||||| |||||||||||||| Sbjct: 21267444 cgtgctgggcatcaacctcaacctccccatccacctcagcctcatcctcaacttctgcgg 21267503 Query: 518 caagggtgttcccaccggcttcatgtgcgcttaa 551 |||||| || |||||||||||||||||| ||||| Sbjct: 21267504 caagggcgtccccaccggcttcatgtgctcttaa 21267537 Score = 147 bits (74), Expect = 8e-32 Identities = 181/216 (83%), Gaps = 3/216 (1%) Strand = Plus / Minus Query: 309 gacgcgctgaagctgggcgtgtgcgcgaacgtgctggacctgatcaaggcgaaggccggc 368 ||||||||||||||| ||||||||| |||||||| | ||| | ||||| ||| |||| Sbjct: 21171670 gacgcgctgaagctgcacgtgtgcgccaacgtgctcggcctcgtgaaggccaagatcggc 21171611 Query: 369 gtgccggcgacg---gagccgtgctgcccgctgctcaacgggctcgtcgaccttgaggcg 425 | | |||| || ||||| |||||| |||||||| |||| ||||||||||| || || Sbjct: 21171610 gcggtggcgccgtacgagccctgctgctcgctgctcgacggcctcgtcgacctcgacgcc 21171551 Query: 426 gccgtctgcctctgcaccgccatcaaggccaccgtgctggggcttaacctcaacatccct 485 ||||||||||||||||||||||||||||||| |||||| || || |||||||||||||| Sbjct: 21171550 gccgtctgcctctgcaccgccatcaaggccaacgtgctcggcctcaacctcaacatcccc 21171491 Query: 486 atccatctcagcctcatactcaacttctgcggcaag 521 ||| | ||||||||||| |||||| |||||||||| Sbjct: 21171490 atcgacctcagcctcatcctcaacaactgcggcaag 21171455 Score = 147 bits (74), Expect = 8e-32 Identities = 181/216 (83%), Gaps = 3/216 (1%) Strand = Plus / Minus Query: 309 gacgcgctgaagctgggcgtgtgcgcgaacgtgctggacctgatcaaggcgaaggccggc 368 ||||||||||||||| ||||||||| |||||||||| ||| ||||||| |||| |||| Sbjct: 21178384 gacgcgctgaagctgcacgtgtgcgccaacgtgctgggcctcgtcaaggccaaggtcggc 21178325 Query: 369 g---tgccggcgacggagccgtgctgcccgctgctcaacgggctcgtcgaccttgaggcg 425 | || || || ||||| |||||| |||||||| |||| ||||||||||| || || Sbjct: 21178324 gccgtgtcgccgtacgagccctgctgctcgctgctcgacggcctcgtcgacctcgacgcc 21178265 Query: 426 gccgtctgcctctgcaccgccatcaaggccaccgtgctggggcttaacctcaacatccct 485 ||||||||||||||||||||||||||||||| ||||||||| | || |||||| |||| Sbjct: 21178264 gccgtctgcctctgcaccgccatcaaggccaacgtgctgggcatcaagctcaacctcccc 21178205 Query: 486 atccatctcagcctcatactcaacttctgcggcaag 521 ||| | ||||||||||| |||||| |||||||||| Sbjct: 21178204 atcgacctcagcctcatcctcaacaactgcggcaag 21178169 Score = 107 bits (54), Expect = 7e-20 Identities = 176/216 (81%), Gaps = 3/216 (1%) Strand = Plus / Minus Query: 309 gacgcgctgaagctgggcgtgtgcgcgaacgtgctggacctgatcaaggcgaaggccggc 368 |||||| |||||||| | |||||||| |||||||||| || ||||||| |||| |||| Sbjct: 21175116 gacgcgttgaagctgcgggtgtgcgccaacgtgctggggctcgtcaaggccaaggtcggc 21175057 Query: 369 gtgccggcgacg---gagccgtgctgcccgctgctcaacgggctcgtcgaccttgaggcg 425 | | |||| || ||||| |||||| |||||||| |||| ||||||||||| || || Sbjct: 21175056 gcggtggcgccgtacgagccctgctgctcgctgctcgacggcctcgtcgacctcgacgcc 21174997 Query: 426 gccgtctgcctctgcaccgccatcaaggccaccgtgctggggcttaacctcaacatccct 485 ||||||||||||||||||||| ||||||||| |||||| || | || ||| || |||| Sbjct: 21174996 gccgtctgcctctgcaccgccgtcaaggccaacgtgctcggcatcaagctcgacctcccc 21174937 Query: 486 atccatctcagcctcatactcaacttctgcggcaag 521 || | ||||||||||| |||||| |||||||||| Sbjct: 21174936 gtcgacctcagcctcatcctcaacaactgcggcaag 21174901 Score = 89.7 bits (45), Expect = 2e-14 Identities = 69/77 (89%) Strand = Plus / Minus Query: 387 tgctgcccgctgctcaacgggctcgtcgaccttgaggcggccgtctgcctctgcaccgcc 446 ||||||||||||||| |||||||| |||||| || || ||||||||||||||||||||| Sbjct: 21155858 tgctgcccgctgctctccgggctcgccgacctcgacgccgccgtctgcctctgcaccgcc 21155799 Query: 447 atcaaggccaccgtgct 463 ||||||||| |||||| Sbjct: 21155798 gtcaaggccaacgtgct 21155782 Score = 79.8 bits (40), Expect = 2e-11 Identities = 103/124 (83%) Strand = Plus / Minus Query: 386 gtgctgcccgctgctcaacgggctcgtcgaccttgaggcggccgtctgcctctgcaccgc 445 ||||||| ||||||| | ||| ||| |||||| || || |||||||||||||||||||| Sbjct: 21148451 gtgctgctcgctgctgcaggggatcgccgacctcgacgccgccgtctgcctctgcaccgc 21148392 Query: 446 catcaaggccaccgtgctggggcttaacctcaacatccctatccatctcagcctcatact 505 | ||||||||| |||||||| | ||||||||| |||| || |||| |||||||| || Sbjct: 21148391 cgtcaaggccaatgtgctgggcatcaacctcaacctccccgtcgatctgagcctcatcct 21148332 Query: 506 caac 509 |||| Sbjct: 21148331 caac 21148328 Score = 77.8 bits (39), Expect = 6e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 58 cgtccagggccacagcttcctgtgccctcttccttgccctcaacctcctcctctt 112 |||||||||| | |||||||||||||||||||| |||||||||||||||||||| Sbjct: 21267041 cgtccagggcgtcggcttcctgtgccctcttcctcgccctcaacctcctcctctt 21267095 >ref|NM_001060047.1| Oryza sativa (japonica cultivar-group) Os04g0554600 (Os04g0554600) mRNA, complete cds Length = 396 Score = 194 bits (98), Expect = 4e-46 Identities = 217/254 (85%), Gaps = 2/254 (0%) Strand = Plus / Plus Query: 293 cggcaagtgcccgacg-gacgcgctgaagctgggcgtgtgcgcgaacgtgctggacctga 351 |||||||||||| ||| |||||||||||||||||||||||||| |||||||||| ||| | Sbjct: 138 cggcaagtgccc-acgcgacgcgctgaagctgggcgtgtgcgccaacgtgctgggcctca 196 Query: 352 tcaaggcgaaggccggcgtgccggcgacggagccgtgctgcccgctgctcaacgggctcg 411 ||||||| |||| ||||||||| || |||||||||||||||||||||| | ||||||| Sbjct: 197 tcaaggccaaggtgggcgtgccgccggcggagccgtgctgcccgctgctggaggggctcg 256 Query: 412 tcgaccttgaggcggccgtctgcctctgcaccgccatcaaggccaccgtgctggggctta 471 ||||||| |||||||| || ||||||||||| |||||||||| || | | || || | | Sbjct: 257 tcgacctcgaggcggcggtgtgcctctgcacggccatcaagggcaacattctcggcatca 316 Query: 472 acctcaacatccctatccatctcagcctcatactcaacttctgcggcaagggtgttccca 531 |||| ||| |||| || | ||||||||||| ||||||| |||||||||| | || |||| Sbjct: 317 accttaacctccccgtcgacctcagcctcatcctcaactactgcggcaagcgcgtgccca 376 Query: 532 ccggcttcatgtgc 545 ||||||||| |||| Sbjct: 377 ccggcttcaagtgc 390 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 194 bits (98), Expect = 4e-46 Identities = 217/254 (85%), Gaps = 2/254 (0%) Strand = Plus / Plus Query: 293 cggcaagtgcccgacg-gacgcgctgaagctgggcgtgtgcgcgaacgtgctggacctga 351 |||||||||||| ||| |||||||||||||||||||||||||| |||||||||| ||| | Sbjct: 27716759 cggcaagtgccc-acgcgacgcgctgaagctgggcgtgtgcgccaacgtgctgggcctca 27716817 Query: 352 tcaaggcgaaggccggcgtgccggcgacggagccgtgctgcccgctgctcaacgggctcg 411 ||||||| |||| ||||||||| || |||||||||||||||||||||| | ||||||| Sbjct: 27716818 tcaaggccaaggtgggcgtgccgccggcggagccgtgctgcccgctgctggaggggctcg 27716877 Query: 412 tcgaccttgaggcggccgtctgcctctgcaccgccatcaaggccaccgtgctggggctta 471 ||||||| |||||||| || ||||||||||| |||||||||| || | | || || | | Sbjct: 27716878 tcgacctcgaggcggcggtgtgcctctgcacggccatcaagggcaacattctcggcatca 27716937 Query: 472 acctcaacatccctatccatctcagcctcatactcaacttctgcggcaagggtgttccca 531 |||| ||| |||| || | ||||||||||| ||||||| |||||||||| | || |||| Sbjct: 27716938 accttaacctccccgtcgacctcagcctcatcctcaactactgcggcaagcgcgtgccca 27716997 Query: 532 ccggcttcatgtgc 545 ||||||||| |||| Sbjct: 27716998 ccggcttcaagtgc 27717011 Score = 182 bits (92), Expect = 2e-42 Identities = 197/232 (84%) Strand = Plus / Plus Query: 309 gacgcgctgaagctgggcgtgtgcgcgaacgtgctggacctgatcaaggcgaaggccggc 368 |||||||||||||||||||||||||| |||||||||| ||| |||||||| |||| ||| Sbjct: 27713575 gacgcgctgaagctgggcgtgtgcgccaacgtgctgggcctcatcaaggccaaggtgggc 27713634 Query: 369 gtgccggcgacggagccgtgctgcccgctgctcaacgggctcgtcgaccttgaggcggcc 428 |||||| || |||||||||||||||||||||| | |||||||||||||| |||||||| Sbjct: 27713635 gtgccgccggcggagccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcg 27713694 Query: 429 gtctgcctctgcaccgccatcaaggccaccgtgctggggcttaacctcaacatccctatc 488 || ||||||||||| ||||||| | || | | || || | ||||||||| |||| || Sbjct: 27713695 gtatgcctctgcacggccatcagaggcaacatcctcggcatcaacctcaacctccccgtc 27713754 Query: 489 catctcagcctcatactcaacttctgcggcaagggtgttcccaccggcttca 540 | ||||||||||| ||||||| |||||||||| | || ||||||||||||| Sbjct: 27713755 gacctcagcctcatcctcaactactgcggcaagcgcgtgcccaccggcttca 27713806 >emb|AL606633.3|OSJN00060 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010H02, complete sequence Length = 173522 Score = 194 bits (98), Expect = 4e-46 Identities = 217/254 (85%), Gaps = 2/254 (0%) Strand = Plus / Plus Query: 293 cggcaagtgcccgacg-gacgcgctgaagctgggcgtgtgcgcgaacgtgctggacctga 351 |||||||||||| ||| |||||||||||||||||||||||||| |||||||||| ||| | Sbjct: 147385 cggcaagtgccc-acgcgacgcgctgaagctgggcgtgtgcgccaacgtgctgggcctca 147443 Query: 352 tcaaggcgaaggccggcgtgccggcgacggagccgtgctgcccgctgctcaacgggctcg 411 ||||||| |||| ||||||||| || |||||||||||||||||||||| | ||||||| Sbjct: 147444 tcaaggccaaggtgggcgtgccgccggcggagccgtgctgcccgctgctggaggggctcg 147503 Query: 412 tcgaccttgaggcggccgtctgcctctgcaccgccatcaaggccaccgtgctggggctta 471 ||||||| |||||||| || ||||||||||| |||||||||| || | | || || | | Sbjct: 147504 tcgacctcgaggcggcggtgtgcctctgcacggccatcaagggcaacattctcggcatca 147563 Query: 472 acctcaacatccctatccatctcagcctcatactcaacttctgcggcaagggtgttccca 531 |||| ||| |||| || | ||||||||||| ||||||| |||||||||| | || |||| Sbjct: 147564 accttaacctccccgtcgacctcagcctcatcctcaactactgcggcaagcgcgtgccca 147623 Query: 532 ccggcttcatgtgc 545 ||||||||| |||| Sbjct: 147624 ccggcttcaagtgc 147637 Score = 182 bits (92), Expect = 2e-42 Identities = 197/232 (84%) Strand = Plus / Plus Query: 309 gacgcgctgaagctgggcgtgtgcgcgaacgtgctggacctgatcaaggcgaaggccggc 368 |||||||||||||||||||||||||| |||||||||| ||| |||||||| |||| ||| Sbjct: 144201 gacgcgctgaagctgggcgtgtgcgccaacgtgctgggcctcatcaaggccaaggtgggc 144260 Query: 369 gtgccggcgacggagccgtgctgcccgctgctcaacgggctcgtcgaccttgaggcggcc 428 |||||| || |||||||||||||||||||||| | |||||||||||||| |||||||| Sbjct: 144261 gtgccgccggcggagccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcg 144320 Query: 429 gtctgcctctgcaccgccatcaaggccaccgtgctggggcttaacctcaacatccctatc 488 || ||||||||||| ||||||| | || | | || || | ||||||||| |||| || Sbjct: 144321 gtatgcctctgcacggccatcagaggcaacatcctcggcatcaacctcaacctccccgtc 144380 Query: 489 catctcagcctcatactcaacttctgcggcaagggtgttcccaccggcttca 540 | ||||||||||| ||||||| |||||||||| | || ||||||||||||| Sbjct: 144381 gacctcagcctcatcctcaactactgcggcaagcgcgtgcccaccggcttca 144432