BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst018a11 (1288 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT829446.1| Oryza sativa (indica cultivar-group) cDNA clone:... 605 e-169 ref|NM_001068599.1| Oryza sativa (japonica cultivar-group) Os08g... 605 e-169 dbj|AK106818.1| Oryza sativa (japonica cultivar-group) cDNA clon... 605 e-169 dbj|AK068244.1| Oryza sativa (japonica cultivar-group) cDNA clon... 605 e-169 gb|EF555543.1| Oryza sativa (indica cultivar-group) hox20 (hox20... 567 e-158 >emb|CT829446.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA031N19, full insert sequence Length = 1409 Score = 605 bits (305), Expect = e-169 Identities = 463/514 (90%), Gaps = 15/514 (2%) Strand = Plus / Plus Query: 443 tggtggtgtcgggatggaggaggaggtgaatgagga---ggacatggtgatttgcagcgg 499 ||||||||| ||| ||||||||||| || ||| ||| |||||||| ||| ||| |||| Sbjct: 539 tggtggtgttggggtggaggaggagatggatgtggacgaggacatggcgatgtgcggcgg 598 Query: 500 c---ggcggcggcacgggggagaagaagcggcggctgagcgcggagcaggtgcgcgcgct 556 | ||||||||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 599 ccgcggcggcggcggcggggagaagaagcggcggctgagcgtggagcaggtgcgcgcgct 658 Query: 557 ggagcggagcttcgagacggagaacaagctggagccggagcggaaggcgcggctggcgcg 616 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 659 ggagcggagcttcgagacggagaacaagctggagccggagcggaaggcgcggctggcgcg 718 Query: 617 cgacctcggcctacagccgcgccaggtcgccgtctggttccagaaccgccgcgcgcgctg 676 ||||||||| || |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 719 cgacctcgggctgcagccgcgccaggtcgccgtctggttccagaaccgccgcgcgcggtg 778 Query: 677 gaagaccaagcagctcgagcgcgactacaccgccctccgccactccttcgacgcgctccg 736 |||||||||||||||||||||||||||| |||| |||||||| |||| |||||||||||| Sbjct: 779 gaagaccaagcagctcgagcgcgactacgccgcgctccgccaatcctacgacgcgctccg 838 Query: 737 cgccgaccacgacgccctccgccgcgacaaggacgccctcttcgccgagatcaaggagct 796 ||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 839 cgccgaccacgacgcgcttcgccgcgacaaggacgccctcctcgccgagatcaaggagct 898 Query: 797 gaaggcgaagctcggggacgaggacgcgacggcgagcttctcgtcggtgaaggaggag-- 854 ||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 899 gaaggggaagctcggcgacgaggacgccgcggcgagcttctcgtcggtgaaggaggagga 958 Query: 855 ----ccggcggcgtccgacgtcgagccccctg---ccgcggcggcgcaaggctcgtccga 907 |||||||||||||||| ||| ||||| | ||| ||| |||| ||||||||||| Sbjct: 959 ggacccggcggcgtccgacgccgaccccccggccaccggcgcgccgcagggctcgtccga 1018 Query: 908 aagcgactccagcgcggtgctgaacgactcggag 941 |||||||| |||||||||||||||||| ||||| Sbjct: 1019 gagcgactcgagcgcggtgctgaacgacgcggag 1052 Score = 178 bits (90), Expect = 4e-41 Identities = 140/156 (89%), Gaps = 3/156 (1%) Strand = Plus / Plus Query: 1013 ccacggcgaggtgttcttccacgggcagcagctgctgaaggtggaggacgacgaggcggc 1072 ||||| ||||||||||||||||||||||| | || |||||||| |||||||||||||| Sbjct: 1145 ccacgccgaggtgttcttccacgggcagc---ttctcaaggtggacgacgacgaggcggc 1201 Query: 1073 gttcctcggcgacgacgacgcggcgtgcgggggcttcttcgccgacgagcagccgccgtc 1132 |||||| |||||||||| |||||||||||| |||||||||||||||||||| | ||||| Sbjct: 1202 gttcctaggcgacgacggcgcggcgtgcggcggcttcttcgccgacgagcatctcccgtc 1261 Query: 1133 gctgccgtggtggaccgagcccacggagcactggac 1168 ||||||||||||| |||||||||| ||||| ||||| Sbjct: 1262 gctgccgtggtgggccgagcccaccgagcaatggac 1297 >ref|NM_001068599.1| Oryza sativa (japonica cultivar-group) Os08g0481400 (Os08g0481400) mRNA, complete cds Length = 1864 Score = 605 bits (305), Expect = e-169 Identities = 463/514 (90%), Gaps = 15/514 (2%) Strand = Plus / Plus Query: 443 tggtggtgtcgggatggaggaggaggtgaatgagga---ggacatggtgatttgcagcgg 499 ||||||||| ||| ||||||||||| || ||| ||| |||||||| ||| ||| |||| Sbjct: 538 tggtggtgttggggtggaggaggagatggatgtggacgaggacatggcgatgtgcggcgg 597 Query: 500 c---ggcggcggcacgggggagaagaagcggcggctgagcgcggagcaggtgcgcgcgct 556 | ||||||||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 598 ccgcggcggcggcggcggggagaagaagcggcggctgagcgtggagcaggtgcgcgcgct 657 Query: 557 ggagcggagcttcgagacggagaacaagctggagccggagcggaaggcgcggctggcgcg 616 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 658 ggagcggagcttcgagacggagaacaagctggagccggagcggaaggcgcggctggcgcg 717 Query: 617 cgacctcggcctacagccgcgccaggtcgccgtctggttccagaaccgccgcgcgcgctg 676 ||||||||| || |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 718 cgacctcgggctgcagccgcgccaggtcgccgtctggttccagaaccgccgcgcgcggtg 777 Query: 677 gaagaccaagcagctcgagcgcgactacaccgccctccgccactccttcgacgcgctccg 736 |||||||||||||||||||||||||||| |||| |||||||| |||| |||||||||||| Sbjct: 778 gaagaccaagcagctcgagcgcgactacgccgcgctccgccaatcctacgacgcgctccg 837 Query: 737 cgccgaccacgacgccctccgccgcgacaaggacgccctcttcgccgagatcaaggagct 796 ||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 838 cgccgaccacgacgcgcttcgccgcgacaaggacgccctcctcgccgagatcaaggagct 897 Query: 797 gaaggcgaagctcggggacgaggacgcgacggcgagcttctcgtcggtgaaggaggag-- 854 ||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 898 gaaggggaagctcggcgacgaggacgccgcggcgagcttctcgtcggtgaaggaggagga 957 Query: 855 ----ccggcggcgtccgacgtcgagccccctg---ccgcggcggcgcaaggctcgtccga 907 |||||||||||||||| ||| ||||| | ||| ||| |||| ||||||||||| Sbjct: 958 ggacccggcggcgtccgacgccgaccccccggccaccggcgcgccgcagggctcgtccga 1017 Query: 908 aagcgactccagcgcggtgctgaacgactcggag 941 |||||||| |||||||||||||||||| ||||| Sbjct: 1018 gagcgactcgagcgcggtgctgaacgacgcggag 1051 Score = 178 bits (90), Expect = 4e-41 Identities = 140/156 (89%), Gaps = 3/156 (1%) Strand = Plus / Plus Query: 1013 ccacggcgaggtgttcttccacgggcagcagctgctgaaggtggaggacgacgaggcggc 1072 ||||| ||||||||||||||||||||||| | || |||||||| |||||||||||||| Sbjct: 1144 ccacgccgaggtgttcttccacgggcagc---ttctcaaggtggacgacgacgaggcggc 1200 Query: 1073 gttcctcggcgacgacgacgcggcgtgcgggggcttcttcgccgacgagcagccgccgtc 1132 |||||| |||||||||| |||||||||||| |||||||||||||||||||| | ||||| Sbjct: 1201 gttcctaggcgacgacggcgcggcgtgcggcggcttcttcgccgacgagcatctcccgtc 1260 Query: 1133 gctgccgtggtggaccgagcccacggagcactggac 1168 ||||||||||||| |||||||||| ||||| ||||| Sbjct: 1261 gctgccgtggtgggccgagcccaccgagcaatggac 1296 >dbj|AK106818.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-D05, full insert sequence Length = 1927 Score = 605 bits (305), Expect = e-169 Identities = 463/514 (90%), Gaps = 15/514 (2%) Strand = Plus / Plus Query: 443 tggtggtgtcgggatggaggaggaggtgaatgagga---ggacatggtgatttgcagcgg 499 ||||||||| ||| ||||||||||| || ||| ||| |||||||| ||| ||| |||| Sbjct: 539 tggtggtgttggggtggaggaggagatggatgtggacgaggacatggcgatgtgcggcgg 598 Query: 500 c---ggcggcggcacgggggagaagaagcggcggctgagcgcggagcaggtgcgcgcgct 556 | ||||||||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 599 ccgcggcggcggcggcggggagaagaagcggcggctgagcgtggagcaggtgcgcgcgct 658 Query: 557 ggagcggagcttcgagacggagaacaagctggagccggagcggaaggcgcggctggcgcg 616 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 659 ggagcggagcttcgagacggagaacaagctggagccggagcggaaggcgcggctggcgcg 718 Query: 617 cgacctcggcctacagccgcgccaggtcgccgtctggttccagaaccgccgcgcgcgctg 676 ||||||||| || |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 719 cgacctcgggctgcagccgcgccaggtcgccgtctggttccagaaccgccgcgcgcggtg 778 Query: 677 gaagaccaagcagctcgagcgcgactacaccgccctccgccactccttcgacgcgctccg 736 |||||||||||||||||||||||||||| |||| |||||||| |||| |||||||||||| Sbjct: 779 gaagaccaagcagctcgagcgcgactacgccgcgctccgccaatcctacgacgcgctccg 838 Query: 737 cgccgaccacgacgccctccgccgcgacaaggacgccctcttcgccgagatcaaggagct 796 ||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 839 cgccgaccacgacgcgcttcgccgcgacaaggacgccctcctcgccgagatcaaggagct 898 Query: 797 gaaggcgaagctcggggacgaggacgcgacggcgagcttctcgtcggtgaaggaggag-- 854 ||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 899 gaaggggaagctcggcgacgaggacgccgcggcgagcttctcgtcggtgaaggaggagga 958 Query: 855 ----ccggcggcgtccgacgtcgagccccctg---ccgcggcggcgcaaggctcgtccga 907 |||||||||||||||| ||| ||||| | ||| ||| |||| ||||||||||| Sbjct: 959 ggacccggcggcgtccgacgccgaccccccggccaccggcgcgccgcagggctcgtccga 1018 Query: 908 aagcgactccagcgcggtgctgaacgactcggag 941 |||||||| |||||||||||||||||| ||||| Sbjct: 1019 gagcgactcgagcgcggtgctgaacgacgcggag 1052 Score = 178 bits (90), Expect = 4e-41 Identities = 140/156 (89%), Gaps = 3/156 (1%) Strand = Plus / Plus Query: 1013 ccacggcgaggtgttcttccacgggcagcagctgctgaaggtggaggacgacgaggcggc 1072 ||||| ||||||||||||||||||||||| | || |||||||| |||||||||||||| Sbjct: 1145 ccacgccgaggtgttcttccacgggcagc---ttctcaaggtggacgacgacgaggcggc 1201 Query: 1073 gttcctcggcgacgacgacgcggcgtgcgggggcttcttcgccgacgagcagccgccgtc 1132 |||||| |||||||||| |||||||||||| |||||||||||||||||||| | ||||| Sbjct: 1202 gttcctaggcgacgacggcgcggcgtgcggcggcttcttcgccgacgagcatctcccgtc 1261 Query: 1133 gctgccgtggtggaccgagcccacggagcactggac 1168 ||||||||||||| |||||||||| ||||| ||||| Sbjct: 1262 gctgccgtggtgggccgagcccaccgagcaatggac 1297 >dbj|AK068244.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013140I04, full insert sequence Length = 1412 Score = 605 bits (305), Expect = e-169 Identities = 463/514 (90%), Gaps = 15/514 (2%) Strand = Plus / Plus Query: 443 tggtggtgtcgggatggaggaggaggtgaatgagga---ggacatggtgatttgcagcgg 499 ||||||||| ||| ||||||||||| || ||| ||| |||||||| ||| ||| |||| Sbjct: 542 tggtggtgttggggtggaggaggagatggatgtggacgaggacatggcgatgtgcggcgg 601 Query: 500 c---ggcggcggcacgggggagaagaagcggcggctgagcgcggagcaggtgcgcgcgct 556 | ||||||||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 602 ccgcggcggcggcggcggggagaagaagcggcggctgagcgtggagcaggtgcgcgcgct 661 Query: 557 ggagcggagcttcgagacggagaacaagctggagccggagcggaaggcgcggctggcgcg 616 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 662 ggagcggagcttcgagacggagaacaagctggagccggagcggaaggcgcggctggcgcg 721 Query: 617 cgacctcggcctacagccgcgccaggtcgccgtctggttccagaaccgccgcgcgcgctg 676 ||||||||| || |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 722 cgacctcgggctgcagccgcgccaggtcgccgtctggttccagaaccgccgcgcgcggtg 781 Query: 677 gaagaccaagcagctcgagcgcgactacaccgccctccgccactccttcgacgcgctccg 736 |||||||||||||||||||||||||||| |||| |||||||| |||| |||||||||||| Sbjct: 782 gaagaccaagcagctcgagcgcgactacgccgcgctccgccaatcctacgacgcgctccg 841 Query: 737 cgccgaccacgacgccctccgccgcgacaaggacgccctcttcgccgagatcaaggagct 796 ||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 842 cgccgaccacgacgcgcttcgccgcgacaaggacgccctcctcgccgagatcaaggagct 901 Query: 797 gaaggcgaagctcggggacgaggacgcgacggcgagcttctcgtcggtgaaggaggag-- 854 ||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 902 gaaggggaagctcggcgacgaggacgccgcggcgagcttctcgtcggtgaaggaggagga 961 Query: 855 ----ccggcggcgtccgacgtcgagccccctg---ccgcggcggcgcaaggctcgtccga 907 |||||||||||||||| ||| ||||| | ||| ||| |||| ||||||||||| Sbjct: 962 ggacccggcggcgtccgacgccgaccccccggccaccggcgcgccgcagggctcgtccga 1021 Query: 908 aagcgactccagcgcggtgctgaacgactcggag 941 |||||||| |||||||||||||||||| ||||| Sbjct: 1022 gagcgactcgagcgcggtgctgaacgacgcggag 1055 Score = 178 bits (90), Expect = 4e-41 Identities = 140/156 (89%), Gaps = 3/156 (1%) Strand = Plus / Plus Query: 1013 ccacggcgaggtgttcttccacgggcagcagctgctgaaggtggaggacgacgaggcggc 1072 ||||| ||||||||||||||||||||||| | || |||||||| |||||||||||||| Sbjct: 1148 ccacgccgaggtgttcttccacgggcagc---ttctcaaggtggacgacgacgaggcggc 1204 Query: 1073 gttcctcggcgacgacgacgcggcgtgcgggggcttcttcgccgacgagcagccgccgtc 1132 |||||| |||||||||| |||||||||||| |||||||||||||||||||| | ||||| Sbjct: 1205 gttcctaggcgacgacggcgcggcgtgcggcggcttcttcgccgacgagcatctcccgtc 1264 Query: 1133 gctgccgtggtggaccgagcccacggagcactggac 1168 ||||||||||||| |||||||||| ||||| ||||| Sbjct: 1265 gctgccgtggtgggccgagcccaccgagcaatggac 1300 >gb|EF555543.1| Oryza sativa (indica cultivar-group) hox20 (hox20) mRNA, partial cds Length = 456 Score = 567 bits (286), Expect = e-158 Identities = 386/418 (92%), Gaps = 6/418 (1%) Strand = Plus / Plus Query: 443 tggtggtgtcgggatggaggaggaggtgaatgagga---ggacatggtgatttgcagcgg 499 ||||||||| ||| ||||||||||| || ||| ||| |||||||| ||| ||| |||| Sbjct: 33 tggtggtgttggggtggaggaggagatggatgtggacgaggacatggcgatgtgcggcgg 92 Query: 500 c---ggcggcggcacgggggagaagaagcggcggctgagcgcggagcaggtgcgcgcgct 556 | ||||||||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 93 ccgcggcggcggcggcggggagaagaagcggcggctgagcgtggagcaggtgcgcgcgct 152 Query: 557 ggagcggagcttcgagacggagaacaagctggagccggagcggaaggcgcggctggcgcg 616 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 153 ggagcggagcttcgagacggagaacaagctggagccggagcggaaggcgcggctggcgcg 212 Query: 617 cgacctcggcctacagccgcgccaggtcgccgtctggttccagaaccgccgcgcgcgctg 676 ||||||||| || |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 213 cgacctcgggctgcagccgcgccaggtcgccgtctggttccagaaccgccgcgcgcggtg 272 Query: 677 gaagaccaagcagctcgagcgcgactacaccgccctccgccactccttcgacgcgctccg 736 |||||||||||||||||||||||||||| |||| |||||||| |||| |||||||||||| Sbjct: 273 gaagaccaagcagctcgagcgcgactacgccgcgctccgccaatcctacgacgcgctccg 332 Query: 737 cgccgaccacgacgccctccgccgcgacaaggacgccctcttcgccgagatcaaggagct 796 ||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 333 cgccgaccacgacgcgcttcgccgcgacaaggacgccctcctcgccgagatcaaggagct 392 Query: 797 gaaggcgaagctcggggacgaggacgcgacggcgagcttctcgtcggtgaaggaggag 854 ||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 393 gaaggggaagctcggcgacgaggacgccgcggcgagcttctcgtcggtgaaggaggag 450