BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst017o14
         (785 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...   222   2e-54
dbj|AP005495.3| Oryza sativa (japonica cultivar-group) genomic D...   222   2e-54
dbj|AP005799.3| Oryza sativa (japonica cultivar-group) genomic D...   222   2e-54
gb|AY022702.1| Oryza sativa microsatellite MRG5027 containing (C...   145   3e-31
emb|CT836304.1| Oryza sativa (indica cultivar-group) cDNA clone:...   131   5e-27

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score =  222 bits (112), Expect = 2e-54
 Identities = 127/132 (96%)
 Strand = Plus / Minus

                                                                           
Query: 172     gtctcgccgtggcactcgccggtgccgtacctgttcggcgggctggccgccatgctgggc 231
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 9105360 gtctcgccgtggcactcgccggtgccgtacctgttcggcgggctggccgccatgctgggg 9105301

                                                                           
Query: 232     ctcatcgcgctcgcgctcctcatcctcgcctgctcctactggaaactcaacaactacctc 291
               |||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 9105300 ctcatcacgctcgcgctcctcatcctcgcctgctcctactggaagctcaacagctacctc 9105241

                           
Query: 292     ggcaccagccac 303
               |||||| |||||
Sbjct: 9105240 ggcaccggccac 9105229



 Score =  129 bits (65), Expect = 2e-26
 Identities = 89/97 (91%)
 Strand = Plus / Plus

                                                                            
Query: 179      cgtggcactcgccggtgccgtacctgttcggcgggctggccgccatgctgggcctcatcg 238
                |||||||||| |||||||||||||| |||||||| || ||||||||||| || |||||||
Sbjct: 21798173 cgtggcactccccggtgccgtacctcttcggcggcctcgccgccatgctcgggctcatcg 21798232

                                                     
Query: 239      cgctcgcgctcctcatcctcgcctgctcctactggaa 275
                || ||||||||||||||||||||||||| ||||||||
Sbjct: 21798233 cgttcgcgctcctcatcctcgcctgctcgtactggaa 21798269



 Score = 89.7 bits (45), Expect = 2e-14
 Identities = 99/117 (84%)
 Strand = Plus / Minus

                                                                           
Query: 348     cggctcaaagtcgccggcggcagcggccgcggcgtcaccggctgtgttcgcggacctcgt 407
               |||||| |||||||||||| | ||||  || ||||  ||||  |||| || |||||||||
Sbjct: 9105175 cggctcgaagtcgccggcgaccgcggtggccgcgtttccggtggtgtacggggacctcgt 9105116

                                                                        
Query: 408     cgccgtcgtcatggccggggagaagatgccgacgttcctggccgagccgattgtccg 464
               ||||||||||||||| ||||||| |||||| |||||| |||||| |||||| |||||
Sbjct: 9105115 cgccgtcgtcatggcaggggagaggatgcccacgttcttggccgcgccgatcgtccg 9105059


>dbj|AP005495.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBb0003H03
          Length = 157905

 Score =  222 bits (112), Expect = 2e-54
 Identities = 127/132 (96%)
 Strand = Plus / Minus

                                                                          
Query: 172    gtctcgccgtggcactcgccggtgccgtacctgttcggcgggctggccgccatgctgggc 231
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 115670 gtctcgccgtggcactcgccggtgccgtacctgttcggcgggctggccgccatgctgggg 115611

                                                                          
Query: 232    ctcatcgcgctcgcgctcctcatcctcgcctgctcctactggaaactcaacaactacctc 291
              |||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 115610 ctcatcacgctcgcgctcctcatcctcgcctgctcctactggaagctcaacagctacctc 115551

                          
Query: 292    ggcaccagccac 303
              |||||| |||||
Sbjct: 115550 ggcaccggccac 115539



 Score = 89.7 bits (45), Expect = 2e-14
 Identities = 99/117 (84%)
 Strand = Plus / Minus

                                                                          
Query: 348    cggctcaaagtcgccggcggcagcggccgcggcgtcaccggctgtgttcgcggacctcgt 407
              |||||| |||||||||||| | ||||  || ||||  ||||  |||| || |||||||||
Sbjct: 115485 cggctcgaagtcgccggcgaccgcggtggccgcgtttccggtggtgtacggggacctcgt 115426

                                                                       
Query: 408    cgccgtcgtcatggccggggagaagatgccgacgttcctggccgagccgattgtccg 464
              ||||||||||||||| ||||||| |||||| |||||| |||||| |||||| |||||
Sbjct: 115425 cgccgtcgtcatggcaggggagaggatgcccacgttcttggccgcgccgatcgtccg 115369


>dbj|AP005799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0012K14
          Length = 155544

 Score =  222 bits (112), Expect = 2e-54
 Identities = 127/132 (96%)
 Strand = Plus / Minus

                                                                         
Query: 172   gtctcgccgtggcactcgccggtgccgtacctgttcggcgggctggccgccatgctgggc 231
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 40854 gtctcgccgtggcactcgccggtgccgtacctgttcggcgggctggccgccatgctgggg 40795

                                                                         
Query: 232   ctcatcgcgctcgcgctcctcatcctcgcctgctcctactggaaactcaacaactacctc 291
             |||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 40794 ctcatcacgctcgcgctcctcatcctcgcctgctcctactggaagctcaacagctacctc 40735

                         
Query: 292   ggcaccagccac 303
             |||||| |||||
Sbjct: 40734 ggcaccggccac 40723



 Score = 89.7 bits (45), Expect = 2e-14
 Identities = 99/117 (84%)
 Strand = Plus / Minus

                                                                         
Query: 348   cggctcaaagtcgccggcggcagcggccgcggcgtcaccggctgtgttcgcggacctcgt 407
             |||||| |||||||||||| | ||||  || ||||  ||||  |||| || |||||||||
Sbjct: 40669 cggctcgaagtcgccggcgaccgcggtggccgcgtttccggtggtgtacggggacctcgt 40610

                                                                      
Query: 408   cgccgtcgtcatggccggggagaagatgccgacgttcctggccgagccgattgtccg 464
             ||||||||||||||| ||||||| |||||| |||||| |||||| |||||| |||||
Sbjct: 40609 cgccgtcgtcatggcaggggagaggatgcccacgttcttggccgcgccgatcgtccg 40553


>gb|AY022702.1| Oryza sativa microsatellite MRG5027 containing (CCG)X8, genomic
           sequence
          Length = 224

 Score =  145 bits (73), Expect = 3e-31
 Identities = 88/93 (94%)
 Strand = Plus / Plus

                                                                       
Query: 211 gggctggccgccatgctgggcctcatcgcgctcgcgctcctcatcctcgcctgctcctac 270
           |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 1   gggctggccgccatgctggggctcatcacgctcgcgctcctcatcctcgcctgctcctac 60

                                            
Query: 271 tggaaactcaacaactacctcggcaccagccac 303
           ||||| ||||||| ||||||||||||| |||||
Sbjct: 61  tggaagctcaacagctacctcggcaccggccac 93


>emb|CT836304.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN024J15, full
           insert sequence
          Length = 883

 Score =  131 bits (66), Expect = 5e-27
 Identities = 93/102 (91%)
 Strand = Plus / Plus

                                                                       
Query: 174 ctcgccgtggcactcgccggtgccgtacctgttcggcgggctggccgccatgctgggcct 233
           |||||||||||| ||||||||||||||||| |||||||||||||| || |||||||| ||
Sbjct: 189 ctcgccgtggcagtcgccggtgccgtacctcttcggcgggctggcggcgatgctggggct 248

                                                     
Query: 234 catcgcgctcgcgctcctcatcctcgcctgctcctactggaa 275
           ||||||| ||||||| |||||||| || ||||||||||||||
Sbjct: 249 catcgcgttcgcgctgctcatcctggcgtgctcctactggaa 290