BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst017l01 (796 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001066316.1| Oryza sativa (japonica cultivar-group) Os07g... 579 e-162 dbj|AK061373.1| Oryza sativa (japonica cultivar-group) cDNA clon... 579 e-162 gb|AY104143.1| Zea mays PCO105026 mRNA sequence 379 e-101 gb|BT018946.1| Zea mays clone Contig94.F mRNA sequence 355 2e-94 gb|DQ117527.1| Lycopersicon esculentum constitutive plastid-lipi... 252 2e-63 >ref|NM_001066316.1| Oryza sativa (japonica cultivar-group) Os07g0516200 (Os07g0516200) mRNA, complete cds Length = 1010 Score = 579 bits (292), Expect = e-162 Identities = 387/418 (92%), Gaps = 3/418 (0%) Strand = Plus / Plus Query: 155 ctgtcgccgcgtccctctccacctccgctaccg---taaaaaaggaggctgttcaaacgg 211 ||||| ||||||||||||||||| |||| ||| | ||||||||||||||||| || | Sbjct: 246 ctgtctccgcgtccctctccaccgccgcggccgccgttaaaaaggaggctgttcagacag 305 Query: 212 agaaggcgccggcagcattaggcccctattctcaggccatcaaagcgaacaatcttgtgt 271 ||||||| ||||||||||||||||| |||||||||||||||||||| |||||| | || | Sbjct: 306 agaaggccccggcagcattaggcccgtattctcaggccatcaaagccaacaatatggtct 365 Query: 272 ttgtctctggggttcttggcctaaatcctgagacagggaagtttgtctctgaaagcgtgg 331 |||||||||| |||||||||||||| |||||||| || |||||||| ||||||||||||| Sbjct: 366 ttgtctctggagttcttggcctaaaccctgagactggaaagtttgtatctgaaagcgtgg 425 Query: 332 aggagcaaactgagcaggttatgaagaacatgggcgaaatattgaaagcaagtggtgcta 391 ||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 426 aggagcaaactgaacaggttatgaagaatatgggtgaaatattgaaagcaagtggtgcta 485 Query: 392 gctactcttcagttgtcaagacaacaatcatgttggctgatctacaggatttcaagaaag 451 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 486 gctactcttcagttgtcaagacaacaatcatgttggctgatctacaagatttcaagaaag 545 Query: 452 tgaatgagatttatgcaaaatattttccagctcctgcaccggcacgctcaacttaccaag 511 |||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 546 tgaatgagatctatgccaaatattttccagctcctgcaccagcacgctcaacttaccaag 605 Query: 512 tagcagccctgccactgaacgccagaatcgagattgagtgcattgctgctctctagtt 569 ||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 606 tagcagctctgccgctgaacgccagaatcgagatcgagtgcattgctgctctctagtt 663 >dbj|AK061373.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-F08, full insert sequence Length = 1010 Score = 579 bits (292), Expect = e-162 Identities = 387/418 (92%), Gaps = 3/418 (0%) Strand = Plus / Plus Query: 155 ctgtcgccgcgtccctctccacctccgctaccg---taaaaaaggaggctgttcaaacgg 211 ||||| ||||||||||||||||| |||| ||| | ||||||||||||||||| || | Sbjct: 246 ctgtctccgcgtccctctccaccgccgcggccgccgttaaaaaggaggctgttcagacag 305 Query: 212 agaaggcgccggcagcattaggcccctattctcaggccatcaaagcgaacaatcttgtgt 271 ||||||| ||||||||||||||||| |||||||||||||||||||| |||||| | || | Sbjct: 306 agaaggccccggcagcattaggcccgtattctcaggccatcaaagccaacaatatggtct 365 Query: 272 ttgtctctggggttcttggcctaaatcctgagacagggaagtttgtctctgaaagcgtgg 331 |||||||||| |||||||||||||| |||||||| || |||||||| ||||||||||||| Sbjct: 366 ttgtctctggagttcttggcctaaaccctgagactggaaagtttgtatctgaaagcgtgg 425 Query: 332 aggagcaaactgagcaggttatgaagaacatgggcgaaatattgaaagcaagtggtgcta 391 ||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 426 aggagcaaactgaacaggttatgaagaatatgggtgaaatattgaaagcaagtggtgcta 485 Query: 392 gctactcttcagttgtcaagacaacaatcatgttggctgatctacaggatttcaagaaag 451 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 486 gctactcttcagttgtcaagacaacaatcatgttggctgatctacaagatttcaagaaag 545 Query: 452 tgaatgagatttatgcaaaatattttccagctcctgcaccggcacgctcaacttaccaag 511 |||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 546 tgaatgagatctatgccaaatattttccagctcctgcaccagcacgctcaacttaccaag 605 Query: 512 tagcagccctgccactgaacgccagaatcgagattgagtgcattgctgctctctagtt 569 ||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 606 tagcagctctgccgctgaacgccagaatcgagatcgagtgcattgctgctctctagtt 663 >gb|AY104143.1| Zea mays PCO105026 mRNA sequence Length = 899 Score = 379 bits (191), Expect = e-101 Identities = 353/407 (86%) Strand = Plus / Plus Query: 160 gccgcgtccctctccacctccgctaccgtaaaaaaggaggctgttcaaacggagaaggcg 219 |||||||||||||| ||||| || ||||| ||||||||||||||| || |||||||| Sbjct: 234 gccgcgtccctctcgacctctgccaccgttgtaaaggaggctgttcagacagagaaggca 293 Query: 220 ccggcagcattaggcccctattctcaggccatcaaagcgaacaatcttgtgtttgtctct 279 || ||||| ||||||| |||||||||||||||||||| || |||||||||||||| ||| Sbjct: 294 ccaccagcactaggcccttattctcaggccatcaaagcaaataatcttgtgtttgtttct 353 Query: 280 ggggttcttggcctaaatcctgagacagggaagtttgtctctgaaagcgtggaggagcaa 339 || ||||||||| | ||||| ||||| |||||||| ||||||||| || ||||||||| Sbjct: 354 ggagttcttggcttgaatcccgagaccaggaagtttatctctgaaaatgttgaggagcaa 413 Query: 340 actgagcaggttatgaagaacatgggcgaaatattgaaagcaagtggtgctagctactct 399 ||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||| ||| Sbjct: 414 actgagcaggttatgaaaaacatgggcgagatattgaaagctagtggtgctagctattct 473 Query: 400 tcagttgtcaagacaacaatcatgttggctgatctacaggatttcaagaaagtgaatgag 459 |||||||| |||||||| ||||||||||||||||| ||||||||||| ||||| || ||| Sbjct: 474 tcagttgtgaagacaacgatcatgttggctgatctgcaggatttcaataaagtaaacgag 533 Query: 460 atttatgcaaaatattttccagctcctgcaccggcacgctcaacttaccaagtagcagcc 519 || |||| |||||||| || || || ||||| ||||| ||||| |||||||| || || Sbjct: 534 atctatggcaaatatttcccggcgccagcacctgcacgatcaacctaccaagtggcggcg 593 Query: 520 ctgccactgaacgccagaatcgagattgagtgcattgctgctctcta 566 ||||||||||| ||| | || |||||||||||||| ||||||||||| Sbjct: 594 ctgccactgaatgcccggattgagattgagtgcatcgctgctctcta 640 Score = 79.8 bits (40), Expect = 2e-11 Identities = 52/56 (92%) Strand = Plus / Plus Query: 26 gtagggtttcagcaatggcgtggagcgccgccgccgtctccaggttcgccaccgcc 81 |||||||| ||| |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 88 gtagggttgtagccatggcgtggagcgccgccgccgtctccaggttcgccgccgcc 143 >gb|BT018946.1| Zea mays clone Contig94.F mRNA sequence Length = 680 Score = 355 bits (179), Expect = 2e-94 Identities = 350/407 (85%) Strand = Plus / Minus Query: 160 gccgcgtccctctccacctccgctaccgtaaaaaaggaggctgttcaaacggagaaggcg 219 |||||||||||||| ||||| || |||| ||||||||||||||| || |||||||| Sbjct: 659 gccgcgtccctctcgacctctgccaccgctgtaaaggaggctgttcagacagagaaggca 600 Query: 220 ccggcagcattaggcccctattctcaggccatcaaagcgaacaatcttgtgtttgtctct 279 || ||||| ||||||| |||||||||||||||||||| || |||||||||||||| ||| Sbjct: 599 ccaccagcactaggcccttattctcaggccatcaaagcaaataatcttgtgtttgtttct 540 Query: 280 ggggttcttggcctaaatcctgagacagggaagtttgtctctgaaagcgtggaggagcaa 339 || ||||||||| | ||||| ||||| |||||||| ||||||||| || ||||||||| Sbjct: 539 ggagttcttggcttgaatcccgagaccaggaagtttatctctgaaaatgttgaggagcaa 480 Query: 340 actgagcaggttatgaagaacatgggcgaaatattgaaagcaagtggtgctagctactct 399 ||||||||||||||||| ||||||||||| ||||||||||| |||||||||| ||| ||| Sbjct: 479 actgagcaggttatgaaaaacatgggcgagatattgaaagctagtggtgctaactattct 420 Query: 400 tcagttgtcaagacaacaatcatgttggctgatctacaggatttcaagaaagtgaatgag 459 |||||||| |||||||| ||||||||||||||||| ||||||||||| ||||| || ||| Sbjct: 419 tcagttgtgaagacaacgatcatgttggctgatctgcaggatttcaataaagtaaacgag 360 Query: 460 atttatgcaaaatattttccagctcctgcaccggcacgctcaacttaccaagtagcagcc 519 || |||| |||||||| || | || ||||| ||||| ||||| |||||||| || || Sbjct: 359 atctatggcaaatatttcccggtgccagcacctgcacgatcaacctaccaagtggcggcg 300 Query: 520 ctgccactgaacgccagaatcgagattgagtgcattgctgctctcta 566 ||||||||||| ||| | || |||||||||||||| ||||||||||| Sbjct: 299 ctgccactgaatgcccggattgagattgagtgcatcgctgctctcta 253 >gb|DQ117527.1| Lycopersicon esculentum constitutive plastid-lipid associated protein (CHRD) mRNA, complete cds Length = 707 Score = 252 bits (127), Expect = 2e-63 Identities = 304/363 (83%) Strand = Plus / Plus Query: 192 aaaggaggctgttcaaacggagaaggcgccggcagcattaggcccctattctcaggccat 251 ||||||||||||||| || || ||||| ||||||||| | || || || ||||| ||||| Sbjct: 213 aaaggaggctgttcacactgaaaaggctccggcagcactggggccatactctcaagccat 272 Query: 252 caaagcgaacaatcttgtgtttgtctctggggttcttggcctaaatcctgagacagggaa 311 |||||| || ||| |||| || |||||||| ||| || || | ||| ||||| ||||| Sbjct: 273 caaagctaataattttgtattcgtctctggatgtctgggtcttattccagagaccgggaa 332 Query: 312 gtttgtctctgaaagcgtggaggagcaaactgagcaggttatgaagaacatgggcgaaat 371 ||||||||| ||||| |||||||| ||||| ||||||||| | ||||| ||||| || || Sbjct: 333 gtttgtctcagaaagtgtggaggatcaaacagagcaggttctcaagaatatgggggagat 392 Query: 372 attgaaagcaagtggtgctagctactcttcagttgtcaagacaacaatcatgttggctga 431 | | ||||||||||||| ||||||||| |||||||| |||||||| ||| |||| ||||| Sbjct: 393 acttaaagcaagtggtgttagctactcctcagttgttaagacaactatcttgttagctga 452 Query: 432 tctacaggatttcaagaaagtgaatgagatttatgcaaaatattttccagctcctgcacc 491 ||| | || ||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 453 tctgaatgacttcaagaaagtgaatgagatttatgcaaaatattttcaagctcctgcacc 512 Query: 492 ggcacgctcaacttaccaagtagcagccctgccactgaacgccagaatcgagattgagtg 551 || || ||||||| || |||||||| |||||| |||| || || || || |||||||| Sbjct: 513 agctcgggcaacttatcaggtagcagcactgccaatgaatgcaaggattgaaattgagtg 572 Query: 552 cat 554 ||| Sbjct: 573 cat 575