BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst017h14 (565 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001050826.1| Oryza sativa (japonica cultivar-group) Os01g... 131 3e-27 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27 dbj|AP003375.2| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27 dbj|AK058427.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 3e-27 >ref|NM_001050826.1| Oryza sativa (japonica cultivar-group) Os01g0756900 (Os01g0756900) mRNA, complete cds Length = 640 Score = 131 bits (66), Expect = 3e-27 Identities = 183/221 (82%), Gaps = 12/221 (5%) Strand = Plus / Plus Query: 115 atctccatggcggccgtgtcgaccaagtctgttgttctcctcgccgcggtaatcgtcgcg 174 |||||||||||||| |||||||||| | | | ||||||| |||||| |||||||| Sbjct: 165 atctccatggcggc---gtcgaccaaggccttggctctcctcttcgcggtgctcgtcgcg 221 Query: 175 ctcgtcgcggcgtcggcggccgtgagggtgcgggaggaggacgtcgtc---ctgggcagt 231 ||||| |||||| ||||||||||||| |||| ||||||||| | |||| |||||| | Sbjct: 222 ctcgtggcggcgacggcggccgtgagagtgctggaggaggaggccgtcgagctgggcggc 281 Query: 232 cttgccccggctccggcgccggcaatggccagcgcggcgggcgccgtcgcgccgggggcg 291 || || || ||||| |||||||| || |||||||||||||||||||||||||||| Sbjct: 282 ctcgcgcctgctcccgcgccggc------caacgcggcgggcgccgtcgcgccgggggcg 335 Query: 292 tgggccgtgaccgccgtggtctcgctcctcgccttcctcgc 332 ||||||||| |||| || ||||||||||| ||||||||||| Sbjct: 336 tgggccgtggccgcggtcgtctcgctcctggccttcctcgc 376 Score = 77.8 bits (39), Expect = 4e-11 Identities = 73/83 (87%), Gaps = 1/83 (1%) Strand = Plus / Plus Query: 474 ggtgttgtgtactgcttatctctcttttgcctgtataagggagaaatat-gttttgaata 532 ||||||||||||||| |||||||||||||||||||||| ||| ||||| |||||||||| Sbjct: 557 ggtgttgtgtactgccgatctctcttttgcctgtataagagaggaatatggttttgaata 616 Query: 533 acatcatttatttattattcttt 555 | | ||| ||||| |||||||| Sbjct: 617 atacaattcatttactattcttt 639 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 131 bits (66), Expect = 3e-27 Identities = 183/221 (82%), Gaps = 12/221 (5%) Strand = Plus / Plus Query: 115 atctccatggcggccgtgtcgaccaagtctgttgttctcctcgccgcggtaatcgtcgcg 174 |||||||||||||| |||||||||| | | | ||||||| |||||| |||||||| Sbjct: 31759882 atctccatggcggc---gtcgaccaaggccttggctctcctcttcgcggtgctcgtcgcg 31759938 Query: 175 ctcgtcgcggcgtcggcggccgtgagggtgcgggaggaggacgtcgtc---ctgggcagt 231 ||||| |||||| ||||||||||||| |||| ||||||||| | |||| |||||| | Sbjct: 31759939 ctcgtggcggcgacggcggccgtgagagtgctggaggaggaggccgtcgagctgggcggc 31759998 Query: 232 cttgccccggctccggcgccggcaatggccagcgcggcgggcgccgtcgcgccgggggcg 291 || || || ||||| |||||||| || |||||||||||||||||||||||||||| Sbjct: 31759999 ctcgcgcctgctcccgcgccggc------caacgcggcgggcgccgtcgcgccgggggcg 31760052 Query: 292 tgggccgtgaccgccgtggtctcgctcctcgccttcctcgc 332 ||||||||| |||| || ||||||||||| ||||||||||| Sbjct: 31760053 tgggccgtggccgcggtcgtctcgctcctggccttcctcgc 31760093 Score = 77.8 bits (39), Expect = 4e-11 Identities = 73/83 (87%), Gaps = 1/83 (1%) Strand = Plus / Plus Query: 474 ggtgttgtgtactgcttatctctcttttgcctgtataagggagaaatat-gttttgaata 532 ||||||||||||||| |||||||||||||||||||||| ||| ||||| |||||||||| Sbjct: 31760274 ggtgttgtgtactgccgatctctcttttgcctgtataagagaggaatatggttttgaata 31760333 Query: 533 acatcatttatttattattcttt 555 | | ||| ||||| |||||||| Sbjct: 31760334 atacaattcatttactattcttt 31760356 >dbj|AP003375.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1414_E05 Length = 105222 Score = 131 bits (66), Expect = 3e-27 Identities = 183/221 (82%), Gaps = 12/221 (5%) Strand = Plus / Plus Query: 115 atctccatggcggccgtgtcgaccaagtctgttgttctcctcgccgcggtaatcgtcgcg 174 |||||||||||||| |||||||||| | | | ||||||| |||||| |||||||| Sbjct: 37920 atctccatggcggc---gtcgaccaaggccttggctctcctcttcgcggtgctcgtcgcg 37976 Query: 175 ctcgtcgcggcgtcggcggccgtgagggtgcgggaggaggacgtcgtc---ctgggcagt 231 ||||| |||||| ||||||||||||| |||| ||||||||| | |||| |||||| | Sbjct: 37977 ctcgtggcggcgacggcggccgtgagagtgctggaggaggaggccgtcgagctgggcggc 38036 Query: 232 cttgccccggctccggcgccggcaatggccagcgcggcgggcgccgtcgcgccgggggcg 291 || || || ||||| |||||||| || |||||||||||||||||||||||||||| Sbjct: 38037 ctcgcgcctgctcccgcgccggc------caacgcggcgggcgccgtcgcgccgggggcg 38090 Query: 292 tgggccgtgaccgccgtggtctcgctcctcgccttcctcgc 332 ||||||||| |||| || ||||||||||| ||||||||||| Sbjct: 38091 tgggccgtggccgcggtcgtctcgctcctggccttcctcgc 38131 Score = 77.8 bits (39), Expect = 4e-11 Identities = 73/83 (87%), Gaps = 1/83 (1%) Strand = Plus / Plus Query: 474 ggtgttgtgtactgcttatctctcttttgcctgtataagggagaaatat-gttttgaata 532 ||||||||||||||| |||||||||||||||||||||| ||| ||||| |||||||||| Sbjct: 38312 ggtgttgtgtactgccgatctctcttttgcctgtataagagaggaatatggttttgaata 38371 Query: 533 acatcatttatttattattcttt 555 | | ||| ||||| |||||||| Sbjct: 38372 atacaattcatttactattcttt 38394 >dbj|AK058427.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-E07, full insert sequence Length = 642 Score = 131 bits (66), Expect = 3e-27 Identities = 183/221 (82%), Gaps = 12/221 (5%) Strand = Plus / Plus Query: 115 atctccatggcggccgtgtcgaccaagtctgttgttctcctcgccgcggtaatcgtcgcg 174 |||||||||||||| |||||||||| | | | ||||||| |||||| |||||||| Sbjct: 167 atctccatggcggc---gtcgaccaaggccttggctctcctcttcgcggtgctcgtcgcg 223 Query: 175 ctcgtcgcggcgtcggcggccgtgagggtgcgggaggaggacgtcgtc---ctgggcagt 231 ||||| |||||| ||||||||||||| |||| ||||||||| | |||| |||||| | Sbjct: 224 ctcgtggcggcgacggcggccgtgagagtgctggaggaggaggccgtcgagctgggcggc 283 Query: 232 cttgccccggctccggcgccggcaatggccagcgcggcgggcgccgtcgcgccgggggcg 291 || || || ||||| |||||||| || |||||||||||||||||||||||||||| Sbjct: 284 ctcgcgcctgctcccgcgccggc------caacgcggcgggcgccgtcgcgccgggggcg 337 Query: 292 tgggccgtgaccgccgtggtctcgctcctcgccttcctcgc 332 ||||||||| |||| || ||||||||||| ||||||||||| Sbjct: 338 tgggccgtggccgcggtcgtctcgctcctggccttcctcgc 378 Score = 77.8 bits (39), Expect = 4e-11 Identities = 73/83 (87%), Gaps = 1/83 (1%) Strand = Plus / Plus Query: 474 ggtgttgtgtactgcttatctctcttttgcctgtataagggagaaatat-gttttgaata 532 ||||||||||||||| |||||||||||||||||||||| ||| ||||| |||||||||| Sbjct: 559 ggtgttgtgtactgccgatctctcttttgcctgtataagagaggaatatggttttgaata 618 Query: 533 acatcatttatttattattcttt 555 | | ||| ||||| |||||||| Sbjct: 619 atacaattcatttactattcttt 641