BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst017f17 (1115 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001059698.1| Oryza sativa (japonica cultivar-group) Os04g... 420 e-114 dbj|AK072486.1| Oryza sativa (japonica cultivar-group) cDNA clon... 420 e-114 gb|AY112399.1| Zea mays CL38702_1 mRNA sequence 311 3e-81 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 178 3e-41 emb|AL731617.3|OSJN00261 Oryza sativa genomic DNA, chromosome 4,... 178 3e-41 >ref|NM_001059698.1| Oryza sativa (japonica cultivar-group) Os04g0490400 (Os04g0490400) mRNA, complete cds Length = 1188 Score = 420 bits (212), Expect = e-114 Identities = 480/568 (84%), Gaps = 1/568 (0%) Strand = Plus / Plus Query: 146 ctcatggcgttcctcctgcgccgaggcgccgcacacgccgcccgctccctgcgcaccgcc 205 ||||||||| || |||||||||||||||| || | || ||||||||| | ||| | ||| Sbjct: 155 ctcatggcgctcttcctgcgccgaggcgcggcccttgctgcccgctccatccgcgcagcc 214 Query: 206 gcggcctcctccgcttccacctccgtccaccgcctgccgaccgtcggatcccttgccggc 265 || || ||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 215 gccgcatcctccgcttccacctccgtccaccgcctaccgtccgtcggatccctcgccggc 274 Query: 266 gccggagagctgacccccacgcagctgttcctccccgagacccggagaggcttcgcgaag 325 || | ||| || |||||||| |||||||||||| ||| |||||||||||||||||||| Sbjct: 275 gcgagggagttggcccccacgaagctgttcctcctggaggcccggagaggcttcgcgaag 334 Query: 326 gggaagaaattgaaggatgatggtcgaggtgatacggttgaagccgttcctgatatcggg 385 |||||||||| |||||||||||||||||| ||||| ||| | | | |||||| || || Sbjct: 335 gggaagaaatcgaaggatgatggtcgaggcgatacagttcaggatgctcctgacattgga 394 Query: 386 ccaaccgtcaaatcggcttccactacgcaaatggagtttgccgtcgttacgctgtcacga 445 || || |||||||| ||| | ||| ||| |||||| ||||| ||| | ||||||| Sbjct: 395 ccgactgtcaaatctgctgcaactcagcagatggaggcagccgttgttgcattgtcacgg 454 Query: 446 gagctgagtaaattgcggacgggaagagcttctcctggcatgct-gaccatatcatggtg 504 ||||| ||||||||||| |||||||||||||||||||| ||||| || || ||||||||| Sbjct: 455 gagcttagtaaattgcgaacgggaagagcttctcctggtatgcttgatcacatcatggtg 514 Query: 505 gagactgcagatgttaaagttgcattaaatcgcattgctgttgtttctgccctggatgcg 564 |||||| ||| |||||| ||||| || |||||| | || |||||||||| ||| ||||| Sbjct: 515 gagactacaggtgttaaggttgcgttgaatcgcttggccgttgtttctgtccttgatgca 574 Query: 565 cataccctgtcagtgatgccttttgatcctagttcaatgaagtctattgagcacgcaatt 624 |||||||| ||||||||||||| |||||| ||||||||||||||||||||||| || || Sbjct: 575 cataccctatcagtgatgccttatgatccgagttcaatgaagtctattgagcatgcgatc 634 Query: 625 atgtcatcaccactgggcatcaatccgacacctgacggcaataggcttattgcagctatc 684 || ||||| ||| ||||||||||||| |||||||| ||||| ||| | || ||| ||| Sbjct: 635 atctcatctccattgggcatcaatccaacacctgatggcaacaggatcatagcaaacatc 694 Query: 685 cctccgttgacaaaggagaatatacagg 712 || ||||||||||||||||||||||||| Sbjct: 695 ccaccgttgacaaaggagaatatacagg 722 Score = 319 bits (161), Expect = 1e-83 Identities = 203/217 (93%) Strand = Plus / Plus Query: 782 actgtgtaaggttgttactaaatctgctgaggatttcaaacaaagtattagaagagcacg 841 ||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||| || Sbjct: 724 actgtgtaaggttgtcactaaatctgccgaggatttcaaacaaagtattagacgagcgcg 783 Query: 842 ccaaaaggcaattgatacgataaagaaatctgcatctggtatgccaaaggatgatgtaaa 901 |||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 784 ccaaaaggcacttgatacgataaagaaatctgcgtctggtatgccgaaggatgatgtaaa 843 Query: 902 gcgacttgagaaggaaatcgtagaattgaccaagaagttcataaagtcggcagatgatat 961 |||||||||||||| | | ||||||||||||||||||||||||||| ||||||||||| Sbjct: 844 acgacttgagaaggaggttgaagaattgaccaagaagttcataaagtcagcagatgatat 903 Query: 962 gtgcaaggctaaggagaaggagatctctggaaactga 998 ||||||||||||||||||||| ||||||||||||||| Sbjct: 904 gtgcaaggctaaggagaaggaaatctctggaaactga 940 >dbj|AK072486.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133F23, full insert sequence Length = 1191 Score = 420 bits (212), Expect = e-114 Identities = 480/568 (84%), Gaps = 1/568 (0%) Strand = Plus / Plus Query: 146 ctcatggcgttcctcctgcgccgaggcgccgcacacgccgcccgctccctgcgcaccgcc 205 ||||||||| || |||||||||||||||| || | || ||||||||| | ||| | ||| Sbjct: 158 ctcatggcgctcttcctgcgccgaggcgcggcccttgctgcccgctccatccgcgcagcc 217 Query: 206 gcggcctcctccgcttccacctccgtccaccgcctgccgaccgtcggatcccttgccggc 265 || || ||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 218 gccgcatcctccgcttccacctccgtccaccgcctaccgtccgtcggatccctcgccggc 277 Query: 266 gccggagagctgacccccacgcagctgttcctccccgagacccggagaggcttcgcgaag 325 || | ||| || |||||||| |||||||||||| ||| |||||||||||||||||||| Sbjct: 278 gcgagggagttggcccccacgaagctgttcctcctggaggcccggagaggcttcgcgaag 337 Query: 326 gggaagaaattgaaggatgatggtcgaggtgatacggttgaagccgttcctgatatcggg 385 |||||||||| |||||||||||||||||| ||||| ||| | | | |||||| || || Sbjct: 338 gggaagaaatcgaaggatgatggtcgaggcgatacagttcaggatgctcctgacattgga 397 Query: 386 ccaaccgtcaaatcggcttccactacgcaaatggagtttgccgtcgttacgctgtcacga 445 || || |||||||| ||| | ||| ||| |||||| ||||| ||| | ||||||| Sbjct: 398 ccgactgtcaaatctgctgcaactcagcagatggaggcagccgttgttgcattgtcacgg 457 Query: 446 gagctgagtaaattgcggacgggaagagcttctcctggcatgct-gaccatatcatggtg 504 ||||| ||||||||||| |||||||||||||||||||| ||||| || || ||||||||| Sbjct: 458 gagcttagtaaattgcgaacgggaagagcttctcctggtatgcttgatcacatcatggtg 517 Query: 505 gagactgcagatgttaaagttgcattaaatcgcattgctgttgtttctgccctggatgcg 564 |||||| ||| |||||| ||||| || |||||| | || |||||||||| ||| ||||| Sbjct: 518 gagactacaggtgttaaggttgcgttgaatcgcttggccgttgtttctgtccttgatgca 577 Query: 565 cataccctgtcagtgatgccttttgatcctagttcaatgaagtctattgagcacgcaatt 624 |||||||| ||||||||||||| |||||| ||||||||||||||||||||||| || || Sbjct: 578 cataccctatcagtgatgccttatgatccgagttcaatgaagtctattgagcatgcgatc 637 Query: 625 atgtcatcaccactgggcatcaatccgacacctgacggcaataggcttattgcagctatc 684 || ||||| ||| ||||||||||||| |||||||| ||||| ||| | || ||| ||| Sbjct: 638 atctcatctccattgggcatcaatccaacacctgatggcaacaggatcatagcaaacatc 697 Query: 685 cctccgttgacaaaggagaatatacagg 712 || ||||||||||||||||||||||||| Sbjct: 698 ccaccgttgacaaaggagaatatacagg 725 Score = 319 bits (161), Expect = 1e-83 Identities = 203/217 (93%) Strand = Plus / Plus Query: 782 actgtgtaaggttgttactaaatctgctgaggatttcaaacaaagtattagaagagcacg 841 ||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||| || Sbjct: 727 actgtgtaaggttgtcactaaatctgccgaggatttcaaacaaagtattagacgagcgcg 786 Query: 842 ccaaaaggcaattgatacgataaagaaatctgcatctggtatgccaaaggatgatgtaaa 901 |||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 787 ccaaaaggcacttgatacgataaagaaatctgcgtctggtatgccgaaggatgatgtaaa 846 Query: 902 gcgacttgagaaggaaatcgtagaattgaccaagaagttcataaagtcggcagatgatat 961 |||||||||||||| | | ||||||||||||||||||||||||||| ||||||||||| Sbjct: 847 acgacttgagaaggaggttgaagaattgaccaagaagttcataaagtcagcagatgatat 906 Query: 962 gtgcaaggctaaggagaaggagatctctggaaactga 998 ||||||||||||||||||||| ||||||||||||||| Sbjct: 907 gtgcaaggctaaggagaaggaaatctctggaaactga 943 >gb|AY112399.1| Zea mays CL38702_1 mRNA sequence Length = 924 Score = 311 bits (157), Expect = 3e-81 Identities = 248/277 (89%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 437 ctgtcacgagagctgagtaaattgcggacgggaagagcttctcctggcatgct-gaccat 495 ||||||||||||||||| ||| | ||||| ||||||||| | ||||||||||| |||||| Sbjct: 742 ctgtcacgagagctgagcaaactacggactggaagagctacacctggcatgcttgaccat 683 Query: 496 atcatggtggagactgcagatgttaaagttgcattaaatcgcattgctgttgtttctgcc 555 ||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||| | Sbjct: 682 atcatggtggagaatgcagatgttaaagttgcattgaatcgcattgccgttgtttctgtc 623 Query: 556 ctggatgcgcataccctgtcagtgatgccttttgatcctagttcaatgaagtctattgag 615 ||||| || |||||||| ||||||||||||| |||||||| ||| |||||||| || ||| Sbjct: 622 ctggacgcacataccctatcagtgatgccttatgatcctacttccatgaagtcgatcgag 563 Query: 616 cacgcaattatgtcatcaccactgggcatcaatccgacacctgacggcaataggcttatt 675 || || ||||| ||||||||| ||||||| ||||| |||||||| || |||||| ||||| Sbjct: 562 catgctattatctcatcaccattgggcattaatccaacacctgatgggaataggattatt 503 Query: 676 gcagctatccctccgttgacaaaggagaatatacagg 712 ||||||||||||||||||||||||||||| ||||||| Sbjct: 502 gcagctatccctccgttgacaaaggagaacatacagg 466 Score = 236 bits (119), Expect = 2e-58 Identities = 192/218 (88%) Strand = Plus / Minus Query: 782 actgtgtaaggttgttactaaatctgctgaggatttcaaacaaagtattagaagagcacg 841 |||||| ||||||||||||||||| || |||||||| ||||||||||||||||||||||| Sbjct: 464 actgtgcaaggttgttactaaatcagcggaggattttaaacaaagtattagaagagcacg 405 Query: 842 ccaaaaggcaattgatacgataaagaaatctgcatctggtatgccaaaggatgatgtaaa 901 |||||||||| ||||||| |||||||| ||||||||| ||||||| |||||||| ||||| Sbjct: 404 ccaaaaggcacttgatacaataaagaagtctgcatctagtatgcccaaggatgacgtaaa 345 Query: 902 gcgacttgagaaggaaatcgtagaattgaccaagaagttcataaagtcggcagatgatat 961 | | |||||||||| || | |||||||||| ||||||||||||| |||||||||| Sbjct: 344 gaggattgagaaggagattgaagaattgaccnnnnngttcataaagtcgtcagatgatat 285 Query: 962 gtgcaaggctaaggagaaggagatctctggaaactgaa 999 ||||||||||||||||||||| ||| |||||||||| Sbjct: 284 gtgcaaggctaaggagaaggaaatcagcggaaactgaa 247 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 178 bits (90), Expect = 3e-41 Identities = 165/190 (86%) Strand = Plus / Minus Query: 146 ctcatggcgttcctcctgcgccgaggcgccgcacacgccgcccgctccctgcgcaccgcc 205 ||||||||| || |||||||||||||||| || | || ||||||||| | ||| | ||| Sbjct: 24483479 ctcatggcgctcttcctgcgccgaggcgcggcccttgctgcccgctccatccgcgcagcc 24483420 Query: 206 gcggcctcctccgcttccacctccgtccaccgcctgccgaccgtcggatcccttgccggc 265 || || ||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 24483419 gccgcatcctccgcttccacctccgtccaccgcctaccgtccgtcggatccctcgccggc 24483360 Query: 266 gccggagagctgacccccacgcagctgttcctccccgagacccggagaggcttcgcgaag 325 || | ||| || |||||||| |||||||||||| ||| |||||||||||||||||||| Sbjct: 24483359 gcgagggagttggcccccacgaagctgttcctcctggaggcccggagaggcttcgcgaag 24483300 Query: 326 gggaagaaat 335 |||||||||| Sbjct: 24483299 gggaagaaat 24483290 Score = 135 bits (68), Expect = 4e-28 Identities = 74/76 (97%) Strand = Plus / Minus Query: 923 agaattgaccaagaagttcataaagtcggcagatgatatgtgcaaggctaaggagaagga 982 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 24481104 agaattgaccaagaagttcataaagtcagcagatgatatgtgcaaggctaaggagaagga 24481045 Query: 983 gatctctggaaactga 998 ||||||||||||||| Sbjct: 24481044 aatctctggaaactga 24481029 Score = 113 bits (57), Expect = 2e-21 Identities = 72/77 (93%) Strand = Plus / Minus Query: 773 aatataggtactgtgtaaggttgttactaaatctgctgaggatttcaaacaaagtattag 832 |||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 24481860 aatataggcactgtgtaaggttgtcactaaatctgccgaggatttcaaacaaagtattag 24481801 Query: 833 aagagcacgccaaaagg 849 | |||| |||||||||| Sbjct: 24481800 acgagcgcgccaaaagg 24481784 Score = 107 bits (54), Expect = 1e-19 Identities = 66/70 (94%) Strand = Plus / Minus Query: 847 aggcaattgatacgataaagaaatctgcatctggtatgccaaaggatgatgtaaagcgac 906 ||||| |||||||||||||||||||||| ||||||||||| |||||||||||||| |||| Sbjct: 24481255 aggcacttgatacgataaagaaatctgcgtctggtatgccgaaggatgatgtaaaacgac 24481196 Query: 907 ttgagaagga 916 |||||||||| Sbjct: 24481195 ttgagaagga 24481186 Score = 91.7 bits (46), Expect = 6e-15 Identities = 85/98 (86%) Strand = Plus / Minus Query: 496 atcatggtggagactgcagatgttaaagttgcattaaatcgcattgctgttgtttctgcc 555 ||||||||||||||| ||| |||||| ||||| || |||||| | || |||||||||| | Sbjct: 24482789 atcatggtggagactacaggtgttaaggttgcgttgaatcgcttggccgttgtttctgtc 24482730 Query: 556 ctggatgcgcataccctgtcagtgatgccttttgatcc 593 || ||||| |||||||| ||||||||||||| |||||| Sbjct: 24482729 cttgatgcacataccctatcagtgatgccttatgatcc 24482692 >emb|AL731617.3|OSJN00261 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0076N16, complete sequence Length = 146313 Score = 178 bits (90), Expect = 3e-41 Identities = 165/190 (86%) Strand = Plus / Minus Query: 146 ctcatggcgttcctcctgcgccgaggcgccgcacacgccgcccgctccctgcgcaccgcc 205 ||||||||| || |||||||||||||||| || | || ||||||||| | ||| | ||| Sbjct: 43110 ctcatggcgctcttcctgcgccgaggcgcggcccttgctgcccgctccatccgcgcagcc 43051 Query: 206 gcggcctcctccgcttccacctccgtccaccgcctgccgaccgtcggatcccttgccggc 265 || || ||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 43050 gccgcatcctccgcttccacctccgtccaccgcctaccgtccgtcggatccctcgccggc 42991 Query: 266 gccggagagctgacccccacgcagctgttcctccccgagacccggagaggcttcgcgaag 325 || | ||| || |||||||| |||||||||||| ||| |||||||||||||||||||| Sbjct: 42990 gcgagggagttggcccccacgaagctgttcctcctggaggcccggagaggcttcgcgaag 42931 Query: 326 gggaagaaat 335 |||||||||| Sbjct: 42930 gggaagaaat 42921 Score = 135 bits (68), Expect = 4e-28 Identities = 74/76 (97%) Strand = Plus / Minus Query: 923 agaattgaccaagaagttcataaagtcggcagatgatatgtgcaaggctaaggagaagga 982 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 40735 agaattgaccaagaagttcataaagtcagcagatgatatgtgcaaggctaaggagaagga 40676 Query: 983 gatctctggaaactga 998 ||||||||||||||| Sbjct: 40675 aatctctggaaactga 40660 Score = 113 bits (57), Expect = 2e-21 Identities = 72/77 (93%) Strand = Plus / Minus Query: 773 aatataggtactgtgtaaggttgttactaaatctgctgaggatttcaaacaaagtattag 832 |||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 41491 aatataggcactgtgtaaggttgtcactaaatctgccgaggatttcaaacaaagtattag 41432 Query: 833 aagagcacgccaaaagg 849 | |||| |||||||||| Sbjct: 41431 acgagcgcgccaaaagg 41415 Score = 107 bits (54), Expect = 1e-19 Identities = 66/70 (94%) Strand = Plus / Minus Query: 847 aggcaattgatacgataaagaaatctgcatctggtatgccaaaggatgatgtaaagcgac 906 ||||| |||||||||||||||||||||| ||||||||||| |||||||||||||| |||| Sbjct: 40886 aggcacttgatacgataaagaaatctgcgtctggtatgccgaaggatgatgtaaaacgac 40827 Query: 907 ttgagaagga 916 |||||||||| Sbjct: 40826 ttgagaagga 40817 Score = 91.7 bits (46), Expect = 6e-15 Identities = 85/98 (86%) Strand = Plus / Minus Query: 496 atcatggtggagactgcagatgttaaagttgcattaaatcgcattgctgttgtttctgcc 555 ||||||||||||||| ||| |||||| ||||| || |||||| | || |||||||||| | Sbjct: 42420 atcatggtggagactacaggtgttaaggttgcgttgaatcgcttggccgttgtttctgtc 42361 Query: 556 ctggatgcgcataccctgtcagtgatgccttttgatcc 593 || ||||| |||||||| ||||||||||||| |||||| Sbjct: 42360 cttgatgcacataccctatcagtgatgccttatgatcc 42323