BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst017f10 (800 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001067594.1| Oryza sativa (japonica cultivar-group) Os08g... 383 e-103 dbj|AK121633.1| Oryza sativa (japonica cultivar-group) cDNA clon... 383 e-103 dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 123 1e-24 dbj|AP005847.4| Oryza sativa (japonica cultivar-group) genomic D... 123 1e-24 dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic D... 123 1e-24 >ref|NM_001067594.1| Oryza sativa (japonica cultivar-group) Os08g0162500 (Os08g0162500) mRNA, complete cds Length = 850 Score = 383 bits (193), Expect = e-103 Identities = 367/425 (86%) Strand = Plus / Plus Query: 77 cggcggggaggtacggcaacctcgacaggtcgttcaagctcgccgcccgctccctcctca 136 ||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||| Sbjct: 148 cggcggggaggtacggcaacctcgaaaggtccttcaagctcgccgcccgctccgtcctca 207 Query: 137 ccgccttctcccgcgaggatgttaacaaggctttctcgtcgttcacggatgccgagaggg 196 |||||| ||||||||||||||| || | ||||||| ||||||| |||||||| ||||||| Sbjct: 208 ccgcctgctcccgcgaggatgtgaagagggctttcccgtcgtttacggatgcggagaggg 267 Query: 197 aacgcctataccaaatgtttgtctatgtgatcaagtctttgcatggcaacatagaggagg 256 ||||| | ||||| ||||| | || |||||||||||| |||| ||||||||||||||| Sbjct: 268 aacgcttgtaccagatgttcatttacgtgatcaagtctctgcacagcaacatagaggagg 327 Query: 257 agtttgaaacattctgccaagaaatacaagttgctaatgcccttgaaaaggtagatcagt 316 | ||||| | | |||||||||| ||||||||||| ||||||||||||| ||||||||| Sbjct: 328 aatttgacataccctgccaagaactacaagttgctgctgcccttgaaaagatagatcagt 387 Query: 317 ttgttgaagagcgaaatctggatgtattatcttcagacaagactagcattgaagacatca 376 |||||||||| | ||| |||||||| | |||||||||||||||| ||||||||||| || Sbjct: 388 ttgttgaagaacaaaagctggatgtgctgtcttcagacaagactaacattgaagacacca 447 Query: 377 aagaaaggatatcaaacacaaagaaggatgaaattgaatatttgacaggtttactagaga 436 | ||| ||||||||| | ||||| |||||| ||||||| ||| | || || |||| Sbjct: 448 agcaaatgatatcaaaggctaagaaagatgaagttgaatacctgaaaagtctaatagaag 507 Query: 437 aggttgaagaaagaaacaatgccatgaaagctcgaattgaactcttgaagaaagaggagg 496 |||||||||| | ||||||||||||||| |||||||||||||||||||||||||| || | Sbjct: 508 aggttgaagagaaaaacaatgccatgaaggctcgaattgaactcttgaagaaagatgatg 567 Query: 497 atttg 501 ||||| Sbjct: 568 atttg 572 >dbj|AK121633.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050M07, full insert sequence Length = 849 Score = 383 bits (193), Expect = e-103 Identities = 367/425 (86%) Strand = Plus / Plus Query: 77 cggcggggaggtacggcaacctcgacaggtcgttcaagctcgccgcccgctccctcctca 136 ||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||| Sbjct: 147 cggcggggaggtacggcaacctcgaaaggtccttcaagctcgccgcccgctccgtcctca 206 Query: 137 ccgccttctcccgcgaggatgttaacaaggctttctcgtcgttcacggatgccgagaggg 196 |||||| ||||||||||||||| || | ||||||| ||||||| |||||||| ||||||| Sbjct: 207 ccgcctgctcccgcgaggatgtgaagagggctttcccgtcgtttacggatgcggagaggg 266 Query: 197 aacgcctataccaaatgtttgtctatgtgatcaagtctttgcatggcaacatagaggagg 256 ||||| | ||||| ||||| | || |||||||||||| |||| ||||||||||||||| Sbjct: 267 aacgcttgtaccagatgttcatttacgtgatcaagtctctgcacagcaacatagaggagg 326 Query: 257 agtttgaaacattctgccaagaaatacaagttgctaatgcccttgaaaaggtagatcagt 316 | ||||| | | |||||||||| ||||||||||| ||||||||||||| ||||||||| Sbjct: 327 aatttgacataccctgccaagaactacaagttgctgctgcccttgaaaagatagatcagt 386 Query: 317 ttgttgaagagcgaaatctggatgtattatcttcagacaagactagcattgaagacatca 376 |||||||||| | ||| |||||||| | |||||||||||||||| ||||||||||| || Sbjct: 387 ttgttgaagaacaaaagctggatgtgctgtcttcagacaagactaacattgaagacacca 446 Query: 377 aagaaaggatatcaaacacaaagaaggatgaaattgaatatttgacaggtttactagaga 436 | ||| ||||||||| | ||||| |||||| ||||||| ||| | || || |||| Sbjct: 447 agcaaatgatatcaaaggctaagaaagatgaagttgaatacctgaaaagtctaatagaag 506 Query: 437 aggttgaagaaagaaacaatgccatgaaagctcgaattgaactcttgaagaaagaggagg 496 |||||||||| | ||||||||||||||| |||||||||||||||||||||||||| || | Sbjct: 507 aggttgaagagaaaaacaatgccatgaaggctcgaattgaactcttgaagaaagatgatg 566 Query: 497 atttg 501 ||||| Sbjct: 567 atttg 571 >dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 123 bits (62), Expect = 1e-24 Identities = 74/78 (94%) Strand = Plus / Plus Query: 77 cggcggggaggtacggcaacctcgacaggtcgttcaagctcgccgcccgctccctcctca 136 ||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||| Sbjct: 3684513 cggcggggaggtacggcaacctcgaaaggtccttcaagctcgccgcccgctccgtcctca 3684572 Query: 137 ccgccttctcccgcgagg 154 |||||| ||||||||||| Sbjct: 3684573 ccgcctgctcccgcgagg 3684590 Score = 89.7 bits (45), Expect = 2e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 437 aggttgaagaaagaaacaatgccatgaaagctcgaattgaactcttgaagaaagaggagg 496 |||||||||| | ||||||||||||||| |||||||||||||||||||||||||| || | Sbjct: 3686468 aggttgaagagaaaaacaatgccatgaaggctcgaattgaactcttgaagaaagatgatg 3686527 Query: 497 atttg 501 ||||| Sbjct: 3686528 atttg 3686532 >dbj|AP005847.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ9990_A01 Length = 101684 Score = 123 bits (62), Expect = 1e-24 Identities = 74/78 (94%) Strand = Plus / Plus Query: 77 cggcggggaggtacggcaacctcgacaggtcgttcaagctcgccgcccgctccctcctca 136 ||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||| Sbjct: 8010 cggcggggaggtacggcaacctcgaaaggtccttcaagctcgccgcccgctccgtcctca 8069 Query: 137 ccgccttctcccgcgagg 154 |||||| ||||||||||| Sbjct: 8070 ccgcctgctcccgcgagg 8087 Score = 89.7 bits (45), Expect = 2e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 437 aggttgaagaaagaaacaatgccatgaaagctcgaattgaactcttgaagaaagaggagg 496 |||||||||| | ||||||||||||||| |||||||||||||||||||||||||| || | Sbjct: 9965 aggttgaagagaaaaacaatgccatgaaggctcgaattgaactcttgaagaaagatgatg 10024 Query: 497 atttg 501 ||||| Sbjct: 10025 atttg 10029 >dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0577B11 Length = 180355 Score = 123 bits (62), Expect = 1e-24 Identities = 74/78 (94%) Strand = Plus / Plus Query: 77 cggcggggaggtacggcaacctcgacaggtcgttcaagctcgccgcccgctccctcctca 136 ||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||| Sbjct: 163019 cggcggggaggtacggcaacctcgaaaggtccttcaagctcgccgcccgctccgtcctca 163078 Query: 137 ccgccttctcccgcgagg 154 |||||| ||||||||||| Sbjct: 163079 ccgcctgctcccgcgagg 163096 Score = 89.7 bits (45), Expect = 2e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 437 aggttgaagaaagaaacaatgccatgaaagctcgaattgaactcttgaagaaagaggagg 496 |||||||||| | ||||||||||||||| |||||||||||||||||||||||||| || | Sbjct: 164974 aggttgaagagaaaaacaatgccatgaaggctcgaattgaactcttgaagaaagatgatg 165033 Query: 497 atttg 501 ||||| Sbjct: 165034 atttg 165038