BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst016p02 (953 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT836490.1| Oryza sativa (indica cultivar-group) cDNA clone:... 238 3e-59 emb|CT836497.1| Oryza sativa (indica cultivar-group) cDNA clone:... 230 8e-57 emb|CR855160.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 228 3e-56 emb|AJ243961.1| Oryza sativa chromosome 4 BAC l1332 genomic sequ... 228 3e-56 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 224 5e-55 >emb|CT836490.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA003M03, full insert sequence Length = 785 Score = 238 bits (120), Expect = 3e-59 Identities = 196/220 (89%), Gaps = 1/220 (0%) Strand = Plus / Plus Query: 307 tgcaaagctcggcgactgaagcaa-tggcgtcccgccggagagatcttggccgcccgctg 365 |||||||||||| | ||||||||| |||||||||||||| ||||||| |||| ||||||| Sbjct: 82 tgcaaagctcggaggctgaagcaaatggcgtcccgccggcgagatctcggccacccgctg 141 Query: 366 ctcgtcgcgctctgcgtcgtggcgctatttgccgtcggatcggagtcccacggcctggag 425 || ||||||||||||||||||||||| || |||||||||||||||||||||||||| ||| Sbjct: 142 ctggtcgcgctctgcgtcgtggcgctcttcgccgtcggatcggagtcccacggcctcgag 201 Query: 426 gacttcggcaacgggaataccgacgcgacgccgcagatggtctccttcttcggcgccaag 485 |||||| || | ||||| ||||| ||||||||| ||||| ||||||||||||| |||| Sbjct: 202 gacttccgcgaggggaacaccgaggcgacgccggcgatggcctccttcttcggcagcaag 261 Query: 486 cccgaggccgcgcagcttccggaggccctcgacgcctcca 525 ||||||||||| |||| |||||||| ||||||||||||| Sbjct: 262 cccgaggccgccgagctcccggaggcgctcgacgcctcca 301 Score = 188 bits (95), Expect = 3e-44 Identities = 163/186 (87%), Gaps = 6/186 (3%) Strand = Plus / Plus Query: 559 ccgccaccaccaccgcgtcggcg------gcaccgcctcgcagatccgtgtccgtcggcg 612 ||||||||||||||||||||||| || ||||||||||||||||||||||| | || Sbjct: 356 ccgccaccaccaccgcgtcggcgtcgtcggcgccgcctcgcagatccgtgtccgtggccg 415 Query: 613 ccggcgtggcctgcggcgtcgcggccgtggcggtcgtgggcgtcgcggtcgccgtggcct 672 |||||||||| |||| ||||||||| |||||||| || |||||||||||||||||||| | Sbjct: 416 ccggcgtggcgtgcgccgtcgcggcggtggcggtggtcggcgtcgcggtcgccgtggcgt 475 Query: 673 acgtggtgcgcgcgaggcgcggcgcgcaccgcgagtcggaggtccagctcggctcgccat 732 ||||||||||||| |||||| ||||| | |||||||||||||| |||||||||||| | Sbjct: 476 acgtggtgcgcgccaggcgccccgcgcggcccgagtcggaggtccggctcggctcgccgt 535 Query: 733 gagccg 738 |||||| Sbjct: 536 gagccg 541 >emb|CT836497.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA011I22, full insert sequence Length = 845 Score = 230 bits (116), Expect = 8e-57 Identities = 195/220 (88%), Gaps = 1/220 (0%) Strand = Plus / Plus Query: 307 tgcaaagctcggcgactgaagcaa-tggcgtcccgccggagagatcttggccgcccgctg 365 |||||||||||| | ||||||||| |||||||||||||| ||||||| |||| ||||||| Sbjct: 90 tgcaaagctcggaggctgaagcaaatggcgtcccgccggcgagatctcggccacccgctg 149 Query: 366 ctcgtcgcgctctgcgtcgtggcgctatttgccgtcggatcggagtcccacggcctggag 425 || ||||||||||||||||||||||| || ||||||||||||| |||||||||||| ||| Sbjct: 150 ctggtcgcgctctgcgtcgtggcgctcttcgccgtcggatcggggtcccacggcctcgag 209 Query: 426 gacttcggcaacgggaataccgacgcgacgccgcagatggtctccttcttcggcgccaag 485 |||||| || | ||||| ||||| ||||||||| ||||| ||||||||||||| |||| Sbjct: 210 gacttccgcgaggggaacaccgaggcgacgccggcgatggcctccttcttcggcagcaag 269 Query: 486 cccgaggccgcgcagcttccggaggccctcgacgcctcca 525 ||||||||||| |||| |||||||| ||||||||||||| Sbjct: 270 cccgaggccgccgagctcccggaggcgctcgacgcctcca 309 Score = 204 bits (103), Expect = 5e-49 Identities = 165/186 (88%), Gaps = 6/186 (3%) Strand = Plus / Plus Query: 559 ccgccaccaccaccgcgtcggcg------gcaccgcctcgcagatccgtgtccgtcggcg 612 ||||||||||||||||||||||| || ||||||||||||||||||||||| | || Sbjct: 364 ccgccaccaccaccgcgtcggcgtcgtcggcgccgcctcgcagatccgtgtccgtggccg 423 Query: 613 ccggcgtggcctgcggcgtcgcggccgtggcggtcgtgggcgtcgcggtcgccgtggcct 672 |||||||||| |||| ||||||||| |||||||| || |||||||||||||||||||| | Sbjct: 424 ccggcgtggcgtgcgccgtcgcggcggtggcggtggtcggcgtcgcggtcgccgtggcgt 483 Query: 673 acgtggtgcgcgcgaggcgcggcgcgcaccgcgagtcggaggtccagctcggctcgccat 732 ||||||||||||| ||||||| ||||| |||||||||||||||| |||||||||||| | Sbjct: 484 acgtggtgcgcgccaggcgcgccgcgcggcgcgagtcggaggtccggctcggctcgccgt 543 Query: 733 gagccg 738 |||||| Sbjct: 544 gagccg 549 >emb|CR855160.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0714H04, complete sequence Length = 106506 Score = 228 bits (115), Expect = 3e-56 Identities = 191/215 (88%), Gaps = 1/215 (0%) Strand = Plus / Plus Query: 312 agctcggcgactgaagcaa-tggcgtcccgccggagagatcttggccgcccgctgctcgt 370 ||||||| | ||||||||| |||||||||||||| ||||||| |||| ||||||||| || Sbjct: 14846 agctcggaggctgaagcaaatggcgtcccgccggcgagatctcggccacccgctgctggt 14905 Query: 371 cgcgctctgcgtcgtggcgctatttgccgtcggatcggagtcccacggcctggaggactt 430 ||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||| Sbjct: 14906 cgcgctctgcgtcgtggcgctcttcgccgtcggatcggagtcccacggcctcgaggactt 14965 Query: 431 cggcaacgggaataccgacgcgacgccgcagatggtctccttcttcggcgccaagcccga 490 | || | ||||| ||||| ||||||||| ||||| ||||||||||||| ||||||||| Sbjct: 14966 ccgcgaggggaacaccgaggcgacgccggcgatggcctccttcttcggcagcaagcccga 15025 Query: 491 ggccgcgcagcttccggaggccctcgacgcctcca 525 |||||| |||| |||||||| ||||||||||||| Sbjct: 15026 ggccgccgagctcccggaggcgctcgacgcctcca 15060 Score = 204 bits (103), Expect = 5e-49 Identities = 165/186 (88%), Gaps = 6/186 (3%) Strand = Plus / Plus Query: 559 ccgccaccaccaccgcgtcggcg------gcaccgcctcgcagatccgtgtccgtcggcg 612 ||||||||||||||||||||||| || ||||||||||||||||||||||| | || Sbjct: 15115 ccgccaccaccaccgcgtcggcgtcgtcggcgccgcctcgcagatccgtgtccgtggccg 15174 Query: 613 ccggcgtggcctgcggcgtcgcggccgtggcggtcgtgggcgtcgcggtcgccgtggcct 672 |||||||||| |||| ||||||||| |||||||| || |||||||||||||||||||| | Sbjct: 15175 ccggcgtggcgtgcgccgtcgcggcggtggcggtggtcggcgtcgcggtcgccgtggcgt 15234 Query: 673 acgtggtgcgcgcgaggcgcggcgcgcaccgcgagtcggaggtccagctcggctcgccat 732 ||||||||||||| ||||||| ||||| |||||||||||||||| |||||||||||| | Sbjct: 15235 acgtggtgcgcgccaggcgcgccgcgcggcgcgagtcggaggtccggctcggctcgccgt 15294 Query: 733 gagccg 738 |||||| Sbjct: 15295 gagccg 15300 >emb|AJ243961.1| Oryza sativa chromosome 4 BAC l1332 genomic sequences Length = 74658 Score = 228 bits (115), Expect = 3e-56 Identities = 191/215 (88%), Gaps = 1/215 (0%) Strand = Plus / Minus Query: 312 agctcggcgactgaagcaa-tggcgtcccgccggagagatcttggccgcccgctgctcgt 370 ||||||| | ||||||||| |||||||||||||| ||||||| |||| ||||||||| || Sbjct: 14585 agctcggaggctgaagcaaatggcgtcccgccggcgagatctcggccacccgctgctggt 14526 Query: 371 cgcgctctgcgtcgtggcgctatttgccgtcggatcggagtcccacggcctggaggactt 430 ||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||| Sbjct: 14525 cgcgctctgcgtcgtggcgctcttcgccgtcggatcggagtcccacggcctcgaggactt 14466 Query: 431 cggcaacgggaataccgacgcgacgccgcagatggtctccttcttcggcgccaagcccga 490 | || | ||||| ||||| ||||||||| ||||| ||||||||||||| ||||||||| Sbjct: 14465 ccgcgaggggaacaccgaggcgacgccggcgatggcctccttcttcggcagcaagcccga 14406 Query: 491 ggccgcgcagcttccggaggccctcgacgcctcca 525 |||||| |||| |||||||| ||||||||||||| Sbjct: 14405 ggccgccgagctcccggaggcgctcgacgcctcca 14371 Score = 204 bits (103), Expect = 5e-49 Identities = 165/186 (88%), Gaps = 6/186 (3%) Strand = Plus / Minus Query: 559 ccgccaccaccaccgcgtcggcg------gcaccgcctcgcagatccgtgtccgtcggcg 612 ||||||||||||||||||||||| || ||||||||||||||||||||||| | || Sbjct: 14316 ccgccaccaccaccgcgtcggcgtcgtcggcgccgcctcgcagatccgtgtccgtggccg 14257 Query: 613 ccggcgtggcctgcggcgtcgcggccgtggcggtcgtgggcgtcgcggtcgccgtggcct 672 |||||||||| |||| ||||||||| |||||||| || |||||||||||||||||||| | Sbjct: 14256 ccggcgtggcgtgcgccgtcgcggcggtggcggtggtcggcgtcgcggtcgccgtggcgt 14197 Query: 673 acgtggtgcgcgcgaggcgcggcgcgcaccgcgagtcggaggtccagctcggctcgccat 732 ||||||||||||| ||||||| ||||| |||||||||||||||| |||||||||||| | Sbjct: 14196 acgtggtgcgcgccaggcgcgccgcgcggcgcgagtcggaggtccggctcggctcgccgt 14137 Query: 733 gagccg 738 |||||| Sbjct: 14136 gagccg 14131 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 224 bits (113), Expect = 5e-55 Identities = 176/197 (89%) Strand = Plus / Plus Query: 329 aatggcgtcccgccggagagatcttggccgcccgctgctcgtcgcgctctgcgtcgtggc 388 |||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 31526671 aatggcgtcccgccggcgagatctcggccgcccgctgctggtcgcgctctgcgtcgtggc 31526730 Query: 389 gctatttgccgtcggatcggagtcccacggcctggaggacttcggcaacgggaataccga 448 ||| || |||||||||||||||||||||||||| ||||||||| || | ||||| ||||| Sbjct: 31526731 gctcttcgccgtcggatcggagtcccacggcctcgaggacttccgcgaggggaacaccga 31526790 Query: 449 cgcgacgccgcagatggtctccttcttcggcgccaagcccgaggccgcgcagcttccgga 508 ||||||||| ||||| |||||||||||| ||||||||||||||| |||| ||||| Sbjct: 31526791 ggcgacgccggcgatggcttccttcttcggcagcaagcccgaggccgccgagctcccgga 31526850 Query: 509 ggccctcgacgcctcca 525 ||| ||||||||||||| Sbjct: 31526851 ggcgctcgacgcctcca 31526867 Score = 202 bits (102), Expect = 2e-48 Identities = 150/166 (90%) Strand = Plus / Plus Query: 573 gcgtcggcggcaccgcctcgcagatccgtgtccgtcggcgccggcgtggcctgcggcgtc 632 |||||| |||| ||||||||||||||||||||||| | |||||||||||| |||| |||| Sbjct: 31526942 gcgtcgtcggcgccgcctcgcagatccgtgtccgtggccgccggcgtggcgtgcgccgtc 31527001 Query: 633 gcggccgtggcggtcgtgggcgtcgcggtcgccgtggcctacgtggtgcgcgcgaggcgc 692 ||||| |||||||| || |||||||||||||||||||| |||||||||||||| |||||| Sbjct: 31527002 gcggcggtggcggtggtcggcgtcgcggtcgccgtggcgtacgtggtgcgcgccaggcgc 31527061 Query: 693 ggcgcgcaccgcgagtcggaggtccagctcggctcgccatgagccg 738 | ||||| |||||||||||||||| |||||||||||| ||||||| Sbjct: 31527062 gccgcgcggcgcgagtcggaggtccggctcggctcgccgtgagccg 31527107