BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst016k18 (1034 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT829267.1| Oryza sativa (indica cultivar-group) cDNA clone:... 420 e-114 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 325 2e-85 dbj|AP003458.4| Oryza sativa (japonica cultivar-group) genomic D... 325 2e-85 ref|NM_001063662.1| Oryza sativa (japonica cultivar-group) Os06g... 289 1e-74 dbj|AK058792.1| Oryza sativa (japonica cultivar-group) cDNA clon... 289 1e-74 >emb|CT829267.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA211A08, full insert sequence Length = 2471 Score = 420 bits (212), Expect = e-114 Identities = 332/366 (90%), Gaps = 7/366 (1%) Strand = Plus / Plus Query: 600 cagtcagatctattggtggttaagaaacagaagaagcgctactgtccaatatattttcaa 659 |||||||| |||||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 1867 cagtcagacctattggttgttaagaaacagaagaagcgttactgtccgatatattttcaa 1926 Query: 660 aaggaggacatagaaagagaacttacaagggcatctaaagcttcaagaggatcagccttg 719 |||||||||||||||||||||||||||| ||| |||||| |||| |||||||| ||||| Sbjct: 1927 aaggaggacatagaaagagaacttacaaaggcttctaaaacttctagaggatctgcctta 1986 Query: 720 tctaagcaaattatggttgggagtttggaggatgtcttgaagaaaatggagatgaatggg 779 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1987 tctaagcaaatcatggttgggagtttggaggatgtcttgaagaaaatggagatgaatgag 2046 Query: 780 aggaattctggttgggatgacttgatcttcataccccctgggaagaacctcaaccaacat 839 ||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||| Sbjct: 2047 aggaattctggttgggatgacttgatctttataccccctgggaaaagcctcaaccaacat 2106 Query: 840 atcaatgaggtatcagcgtaattttgtt-gtgca-tgatagcaca--gtttga--acaca 893 || |||||||||||||| |||||||||| |||| ||||| |||| |||||| ||||| Sbjct: 2107 attaatgaggtatcagcataattttgttcttgcagtgataccacagggtttgagcacaca 2166 Query: 894 cacatttgttcacttgaaatgctgtgatggccagctaatcaacaatgtcaaagtcgctgc 953 ||| ||| |||||| ||||||||||||||||||| |||||| | |||| |||| ||||| Sbjct: 2167 tacacttgctcacttcaaatgctgtgatggccagccaatcaatagtgtc-aagttgctgc 2225 Query: 954 ctgagc 959 |||||| Sbjct: 2226 ctgagc 2231 Score = 167 bits (84), Expect = 1e-37 Identities = 111/120 (92%) Strand = Plus / Plus Query: 428 gcggcagccggtgctagggaagggagcaaaagtggtgcctattacgctcgatcaggttta 487 ||||||||||||| |||||| || |||||||||||||| |||||||| ||||||||||| Sbjct: 84 gcggcagccggtggtagggagaggggcaaaagtggtgccgattacgcttgatcaggttta 143 Query: 488 tatgttgaaggccgaaggtattgcatttcggttcttacctgaccctcttcaaataaagaa 547 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 144 catgttgaaggctgaaggtattgcatttcggttcttacctgaccctcttcaaattaagaa 203 Score = 77.8 bits (39), Expect = 8e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 556 agttgaaatctggcttaactgcttttgatggtgttcctgtttt 598 |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 968 agttaaaatctggcttaactgcttttgatggtgttcctgtttt 1010 >dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 325 bits (164), Expect = 2e-85 Identities = 176/180 (97%) Strand = Plus / Minus Query: 239 cgcctccctctccctcgcgctcgcgcccgacgaggtcgcgcgcgcgctcaccggcacgcc 298 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 5787711 cgcctccctctccctcgcgctcgcgcccgacgaggtcgcgcgcgcgctcaccggcacccc 5787652 Query: 299 cgtcttcaccgtctgcaactccagcaacgagttcgtgctcgtctccgaccccgccaccgg 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5787651 cgtcttcaccgtctgcaactccagcaacgagttcgtgctcgtctccgaccccgccaccgg 5787592 Query: 359 cctccgctccctcggcctcctctgcttccgctccgaggatgccgacgccctcctctccca 418 ||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||| Sbjct: 5787591 cctccgctccctcggcctcctctgcttccgctccgaggacgccgacgctctcctcaccca 5787532 Score = 172 bits (87), Expect = 2e-39 Identities = 174/197 (88%), Gaps = 7/197 (3%) Strand = Plus / Minus Query: 769 agatgaatgggaggaattctggttgggatgacttgatcttcataccccctgggaagaacc 828 ||||||||| |||||||||||||||||||||||||||||| |||||||||||||| | || Sbjct: 5784813 agatgaatgagaggaattctggttgggatgacttgatctttataccccctgggaaaagcc 5784754 Query: 829 tcaaccaacatatcaatgaggtatcagcgtaattttgtt-gtgca-tgatagcaca--gt 884 ||||||||||||| |||||||||||||| |||||||||| |||| ||||| |||| || Sbjct: 5784753 tcaaccaacatattaatgaggtatcagcataattttgttcttgcagtgataccacagggt 5784694 Query: 885 ttga--acacacacatttgttcacttgaaatgctgtgatggccagctaatcaacaatgtc 942 |||| ||||| ||| ||| |||||| ||||||||||||||||||| |||||| | |||| Sbjct: 5784693 ttgagcacacatacacttgctcacttcaaatgctgtgatggccagccaatcaatagtgtc 5784634 Query: 943 aaagtcgctgcctgagc 959 |||| ||||||||||| Sbjct: 5784633 -aagttgctgcctgagc 5784618 Score = 111 bits (56), Expect = 6e-21 Identities = 65/68 (95%) Strand = Plus / Minus Query: 480 caggtttatatgttgaaggccgaaggtattgcatttcggttcttacctgaccctcttcaa 539 |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 5786947 caggtttacatgttgaaggctgaaggtattgcatttcggttcttacctgaccctcttcaa 5786888 Query: 540 ataaagaa 547 || ||||| Sbjct: 5786887 attaagaa 5786880 Score = 105 bits (53), Expect = 4e-19 Identities = 77/85 (90%) Strand = Plus / Minus Query: 114 tcgccgcctcccaaccccatcgcagctgcctcgtccttcctccaccaccacctctcccgc 173 |||| ||| ||||||||| |||| || ||||| ||||||||||||||||||||||||||| Sbjct: 5787857 tcgctgccccccaaccccctcgccgcggcctcctccttcctccaccaccacctctcccgc 5787798 Query: 174 ctcgcctcccgcttcgccgccccgc 198 ||||| |||||||||||||| |||| Sbjct: 5787797 ctcgcgtcccgcttcgccgcgccgc 5787773 Score = 95.6 bits (48), Expect = 3e-16 Identities = 69/76 (90%) Strand = Plus / Minus Query: 661 aggaggacatagaaagagaacttacaagggcatctaaagcttcaagaggatcagccttgt 720 ||||||||||||||||||||||||||| ||| |||||| |||| |||||||| ||||| | Sbjct: 5785076 aggaggacatagaaagagaacttacaaaggcttctaaaacttctagaggatctgccttat 5785017 Query: 721 ctaagcaaattatggt 736 |||||||||| ||||| Sbjct: 5785016 ctaagcaaatcatggt 5785001 Score = 95.6 bits (48), Expect = 3e-16 Identities = 60/64 (93%) Strand = Plus / Minus Query: 600 cagtcagatctattggtggttaagaaacagaagaagcgctactgtccaatatattttcaa 659 |||||||| |||||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 5785216 cagtcagacctattggttgttaagaaacagaagaagcgttactgtccgatatattttcaa 5785157 Query: 660 aagg 663 |||| Sbjct: 5785156 aagg 5785153 Score = 77.8 bits (39), Expect = 8e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 556 agttgaaatctggcttaactgcttttgatggtgttcctgtttt 598 |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 5786115 agttaaaatctggcttaactgcttttgatggtgttcctgtttt 5786073 >dbj|AP003458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0701E03 Length = 183245 Score = 325 bits (164), Expect = 2e-85 Identities = 176/180 (97%) Strand = Plus / Minus Query: 239 cgcctccctctccctcgcgctcgcgcccgacgaggtcgcgcgcgcgctcaccggcacgcc 298 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 103240 cgcctccctctccctcgcgctcgcgcccgacgaggtcgcgcgcgcgctcaccggcacccc 103181 Query: 299 cgtcttcaccgtctgcaactccagcaacgagttcgtgctcgtctccgaccccgccaccgg 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103180 cgtcttcaccgtctgcaactccagcaacgagttcgtgctcgtctccgaccccgccaccgg 103121 Query: 359 cctccgctccctcggcctcctctgcttccgctccgaggatgccgacgccctcctctccca 418 ||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||| Sbjct: 103120 cctccgctccctcggcctcctctgcttccgctccgaggacgccgacgctctcctcaccca 103061 Score = 172 bits (87), Expect = 2e-39 Identities = 174/197 (88%), Gaps = 7/197 (3%) Strand = Plus / Minus Query: 769 agatgaatgggaggaattctggttgggatgacttgatcttcataccccctgggaagaacc 828 ||||||||| |||||||||||||||||||||||||||||| |||||||||||||| | || Sbjct: 100342 agatgaatgagaggaattctggttgggatgacttgatctttataccccctgggaaaagcc 100283 Query: 829 tcaaccaacatatcaatgaggtatcagcgtaattttgtt-gtgca-tgatagcaca--gt 884 ||||||||||||| |||||||||||||| |||||||||| |||| ||||| |||| || Sbjct: 100282 tcaaccaacatattaatgaggtatcagcataattttgttcttgcagtgataccacagggt 100223 Query: 885 ttga--acacacacatttgttcacttgaaatgctgtgatggccagctaatcaacaatgtc 942 |||| ||||| ||| ||| |||||| ||||||||||||||||||| |||||| | |||| Sbjct: 100222 ttgagcacacatacacttgctcacttcaaatgctgtgatggccagccaatcaatagtgtc 100163 Query: 943 aaagtcgctgcctgagc 959 |||| ||||||||||| Sbjct: 100162 -aagttgctgcctgagc 100147 Score = 111 bits (56), Expect = 6e-21 Identities = 65/68 (95%) Strand = Plus / Minus Query: 480 caggtttatatgttgaaggccgaaggtattgcatttcggttcttacctgaccctcttcaa 539 |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 102476 caggtttacatgttgaaggctgaaggtattgcatttcggttcttacctgaccctcttcaa 102417 Query: 540 ataaagaa 547 || ||||| Sbjct: 102416 attaagaa 102409 Score = 105 bits (53), Expect = 4e-19 Identities = 77/85 (90%) Strand = Plus / Minus Query: 114 tcgccgcctcccaaccccatcgcagctgcctcgtccttcctccaccaccacctctcccgc 173 |||| ||| ||||||||| |||| || ||||| ||||||||||||||||||||||||||| Sbjct: 103386 tcgctgccccccaaccccctcgccgcggcctcctccttcctccaccaccacctctcccgc 103327 Query: 174 ctcgcctcccgcttcgccgccccgc 198 ||||| |||||||||||||| |||| Sbjct: 103326 ctcgcgtcccgcttcgccgcgccgc 103302 Score = 95.6 bits (48), Expect = 3e-16 Identities = 69/76 (90%) Strand = Plus / Minus Query: 661 aggaggacatagaaagagaacttacaagggcatctaaagcttcaagaggatcagccttgt 720 ||||||||||||||||||||||||||| ||| |||||| |||| |||||||| ||||| | Sbjct: 100605 aggaggacatagaaagagaacttacaaaggcttctaaaacttctagaggatctgccttat 100546 Query: 721 ctaagcaaattatggt 736 |||||||||| ||||| Sbjct: 100545 ctaagcaaatcatggt 100530 Score = 95.6 bits (48), Expect = 3e-16 Identities = 60/64 (93%) Strand = Plus / Minus Query: 600 cagtcagatctattggtggttaagaaacagaagaagcgctactgtccaatatattttcaa 659 |||||||| |||||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 100745 cagtcagacctattggttgttaagaaacagaagaagcgttactgtccgatatattttcaa 100686 Query: 660 aagg 663 |||| Sbjct: 100685 aagg 100682 Score = 77.8 bits (39), Expect = 8e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 556 agttgaaatctggcttaactgcttttgatggtgttcctgtttt 598 |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 101644 agttaaaatctggcttaactgcttttgatggtgttcctgtttt 101602 >ref|NM_001063662.1| Oryza sativa (japonica cultivar-group) Os06g0213200 (Os06g0213200) mRNA, partial cds Length = 427 Score = 289 bits (146), Expect = 1e-74 Identities = 254/284 (89%), Gaps = 7/284 (2%) Strand = Plus / Plus Query: 682 ttacaagggcatctaaagcttcaagaggatcagccttgtctaagcaaattatggttggga 741 |||||| ||| |||||| |||| |||||||| ||||| ||||||||||| |||||||||| Sbjct: 1 ttacaaaggcttctaaaacttctagaggatctgccttatctaagcaaatcatggttggga 60 Query: 742 gtttggaggatgtcttgaagaaaatggagatgaatgggaggaattctggttgggatgact 801 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 61 gtttggaggatgtcttgaagaaaatggagatgaatgagaggaattctggttgggatgact 120 Query: 802 tgatcttcataccccctgggaagaacctcaaccaacatatcaatgaggtatcagcgtaat 861 ||||||| |||||||||||||| | ||||||||||||||| |||||||||||||| |||| Sbjct: 121 tgatctttataccccctgggaaaagcctcaaccaacatattaatgaggtatcagcataat 180 Query: 862 tttgtt-gtgca-tgatagcaca--gtttga--acacacacatttgttcacttgaaatgc 915 |||||| |||| ||||| |||| |||||| ||||| ||| ||| |||||| |||||| Sbjct: 181 tttgttcttgcagtgataccacagggtttgagcacacatacacttgctcacttcaaatgc 240 Query: 916 tgtgatggccagctaatcaacaatgtcaaagtcgctgcctgagc 959 ||||||||||||| |||||| | |||| |||| ||||||||||| Sbjct: 241 tgtgatggccagccaatcaatagtgtc-aagttgctgcctgagc 283 >dbj|AK058792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-G02, full insert sequence Length = 427 Score = 289 bits (146), Expect = 1e-74 Identities = 254/284 (89%), Gaps = 7/284 (2%) Strand = Plus / Plus Query: 682 ttacaagggcatctaaagcttcaagaggatcagccttgtctaagcaaattatggttggga 741 |||||| ||| |||||| |||| |||||||| ||||| ||||||||||| |||||||||| Sbjct: 1 ttacaaaggcttctaaaacttctagaggatctgccttatctaagcaaatcatggttggga 60 Query: 742 gtttggaggatgtcttgaagaaaatggagatgaatgggaggaattctggttgggatgact 801 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 61 gtttggaggatgtcttgaagaaaatggagatgaatgagaggaattctggttgggatgact 120 Query: 802 tgatcttcataccccctgggaagaacctcaaccaacatatcaatgaggtatcagcgtaat 861 ||||||| |||||||||||||| | ||||||||||||||| |||||||||||||| |||| Sbjct: 121 tgatctttataccccctgggaaaagcctcaaccaacatattaatgaggtatcagcataat 180 Query: 862 tttgtt-gtgca-tgatagcaca--gtttga--acacacacatttgttcacttgaaatgc 915 |||||| |||| ||||| |||| |||||| ||||| ||| ||| |||||| |||||| Sbjct: 181 tttgttcttgcagtgataccacagggtttgagcacacatacacttgctcacttcaaatgc 240 Query: 916 tgtgatggccagctaatcaacaatgtcaaagtcgctgcctgagc 959 ||||||||||||| |||||| | |||| |||| ||||||||||| Sbjct: 241 tgtgatggccagccaatcaatagtgtc-aagttgctgcctgagc 283