BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst016i16
         (958 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NM_001055894.1| Oryza sativa (japonica cultivar-group) Os03g...   218   3e-53
dbj|AK073633.1| Oryza sativa (japonica cultivar-group) cDNA clon...   218   3e-53
dbj|AK062070.1| Oryza sativa (japonica cultivar-group) cDNA clon...   218   3e-53
gb|AY044237.1| Hordeum vulgare Sec61 alpha subunit mRNA, complet...   202   2e-48
emb|CT831162.1| Oryza sativa (indica cultivar-group) cDNA clone:...   200   7e-48

>ref|NM_001055894.1| Oryza sativa (japonica cultivar-group) Os03g0213100 (Os03g0213100)
            mRNA, complete cds
          Length = 1969

 Score =  218 bits (110), Expect = 3e-53
 Identities = 134/142 (94%)
 Strand = Plus / Plus

                                                                        
Query: 374  gctgatgttcttgcaaatccattccacacactgttctatgtgattttcatgctgtcagct 433
            ||||||||||| ||||||||||||||  |||||||||||||| | |||||||||||||||
Sbjct: 1203 gctgatgttctcgcaaatccattccatgcactgttctatgtggtcttcatgctgtcagct 1262

                                                                        
Query: 434  tgtgcactcttctcaaagacatggattgaagtatctggttcatcagcaaaggatgttgcc 493
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 1263 tgtgctctcttctcaaagacatggattgaagtatctggttcatcagcaaaggatgttgct 1322

                                  
Query: 494  aagcagctcaaggagcaacaaa 515
            || |||||||||||||||||||
Sbjct: 1323 aaacagctcaaggagcaacaaa 1344


>dbj|AK073633.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048G12, full
            insert sequence
          Length = 1970

 Score =  218 bits (110), Expect = 3e-53
 Identities = 134/142 (94%)
 Strand = Plus / Plus

                                                                        
Query: 374  gctgatgttcttgcaaatccattccacacactgttctatgtgattttcatgctgtcagct 433
            ||||||||||| ||||||||||||||  |||||||||||||| | |||||||||||||||
Sbjct: 1204 gctgatgttctcgcaaatccattccatgcactgttctatgtggtcttcatgctgtcagct 1263

                                                                        
Query: 434  tgtgcactcttctcaaagacatggattgaagtatctggttcatcagcaaaggatgttgcc 493
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 1264 tgtgctctcttctcaaagacatggattgaagtatctggttcatcagcaaaggatgttgct 1323

                                  
Query: 494  aagcagctcaaggagcaacaaa 515
            || |||||||||||||||||||
Sbjct: 1324 aaacagctcaaggagcaacaaa 1345


>dbj|AK062070.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-E03, full
            insert sequence
          Length = 1621

 Score =  218 bits (110), Expect = 3e-53
 Identities = 134/142 (94%)
 Strand = Plus / Plus

                                                                        
Query: 374  gctgatgttcttgcaaatccattccacacactgttctatgtgattttcatgctgtcagct 433
            ||||||||||| ||||||||||||||  |||||||||||||| | |||||||||||||||
Sbjct: 964  gctgatgttctcgcaaatccattccatgcactgttctatgtggtcttcatgctgtcagct 1023

                                                                        
Query: 434  tgtgcactcttctcaaagacatggattgaagtatctggttcatcagcaaaggatgttgcc 493
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 1024 tgtgctctcttctcaaagacatggattgaagtatctggttcatcagcaaaggatgttgct 1083

                                  
Query: 494  aagcagctcaaggagcaacaaa 515
            || |||||||||||||||||||
Sbjct: 1084 aaacagctcaaggagcaacaaa 1105


>gb|AY044237.1| Hordeum vulgare Sec61 alpha subunit mRNA, complete cds
          Length = 1864

 Score =  202 bits (102), Expect = 2e-48
 Identities = 177/202 (87%), Gaps = 5/202 (2%)
 Strand = Plus / Plus

                                                                        
Query: 372  tggctgatgttcttgcaaatccattccacacactgttctatgtgattttcatgctgtcag 431
            ||||||||||| | ||||||||||||||  | |||||||||||| | |||||||||||||
Sbjct: 1176 tggctgatgttgtcgcaaatccattccatgcgctgttctatgtggtcttcatgctgtcag 1235

                                                                        
Query: 432  cttgtgcactcttctcaaagacatggattgaagtatctggttcatcagcaaaggatgttg 491
            |||| || |||||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 1236 cttgcgctctcttctcaaagacatggattgaagtttctggttcatcagcaagggatgttg 1295

                                                                        
Query: 492  ccaagcagctcaaggagcaacaaaataaatgttgatgccaggtcaccgcgagtcaaacct 551
            | | |||||||||||| |||||||     || |||||||||| || || ||||||||| |
Sbjct: 1296 ctaggcagctcaaggaacaacaaa-----tggtgatgccaggccatcgtgagtcaaactt 1350

                                  
Query: 552  gcagagggagttgaacagatac 573
            | ||||||||||||||||||||
Sbjct: 1351 ggagagggagttgaacagatac 1372



 Score = 81.8 bits (41), Expect = 5e-12
 Identities = 68/77 (88%)
 Strand = Plus / Plus

                                                                        
Query: 691  tcacaatcatttaccagtactttgagacatttgagagggaaagggcaaccgagcttggtt 750
            |||| ||||| ||||| ||||| ||||| || |||| ||||||||| |||||||||||||
Sbjct: 1476 tcaccatcatataccaatacttcgagacgttcgagaaggaaagggcgaccgagcttggtt 1535

                             
Query: 751  tcttcggtttctgatca 767
            |||||||||| ||||||
Sbjct: 1536 tcttcggtttttgatca 1552


>emb|CT831162.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA102G14, full
            insert sequence
          Length = 2121

 Score =  200 bits (101), Expect = 7e-48
 Identities = 227/269 (84%), Gaps = 5/269 (1%)
 Strand = Plus / Plus

                                                                        
Query: 372  tggctgatgttcttgcaaatccattccacacactgttctatgtgattttcatgctgtcag 431
            |||||||||||||||| ||||| |||||  | |||||||||||| | |||||||||||||
Sbjct: 1198 tggctgatgttcttgcgaatccgttccatgcgctgttctatgtggtattcatgctgtcag 1257

                                                                        
Query: 432  cttgtgcactcttctcaaagacatggattgaagtatctggttcatcagcaaaggatgttg 491
            ||||||| |||||||||||||||||||||||||| ||||| ||||| |||||||||||||
Sbjct: 1258 cttgtgctctcttctcaaagacatggattgaagtttctggctcatctgcaaaggatgttg 1317

                                                                        
Query: 492  ccaagcagctcaaggagcaacaaaataaatgttgatgccaggtcaccgcgagtcaaacct 551
            | || ||| | ||||| |||||||     || ||||||| || || || ||||||||| |
Sbjct: 1318 ctaaacagttgaaggaacaacaaa-----tggtgatgcctggccatcgtgagtcaaactt 1372

                                                                        
Query: 552  gcagagggagttgaacagatacgttcccactgccgcagccttccgtggtgtgtgcattgg 611
            ||||| ||| |||||||||||| | ||||||||||| || ||  |||| |||||||||||
Sbjct: 1373 gcagaaggaattgaacagatacatccccactgccgctgcatttggtggagtgtgcattgg 1432

                                         
Query: 612  cgctttgactgtcctaaccgacttcatgg 640
             || |||||||| ||| | || |||||||
Sbjct: 1433 tgcattgactgttctagctgatttcatgg 1461



 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 63/70 (90%)
 Strand = Plus / Plus

                                                                        
Query: 696  atcatttaccagtactttgagacatttgagagggaaagggcaaccgagcttggtttcttc 755
            ||||||||||||||||| |||||||| ||||  || ||||||||||||||||||||||| 
Sbjct: 1503 atcatttaccagtacttcgagacattcgagaaagagagggcaaccgagcttggtttcttt 1562

                      
Query: 756  ggtttctgat 765
            ||||| ||||
Sbjct: 1563 ggtttttgat 1572