BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst016e02
         (778 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NM_001060985.1| Oryza sativa (japonica cultivar-group) Os05g...   113   1e-21
gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome...   113   1e-21
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...   113   1e-21
dbj|AK108933.1| Oryza sativa (japonica cultivar-group) cDNA clon...   113   1e-21
emb|X79935.1|ZMDOF3 Z.mays Dof3 mRNA                                   98   6e-17

>ref|NM_001060985.1| Oryza sativa (japonica cultivar-group) Os05g0112200 (Os05g0112200)
           mRNA, complete cds
          Length = 1519

 Score =  113 bits (57), Expect = 1e-21
 Identities = 109/125 (87%), Gaps = 6/125 (4%)
 Strand = Plus / Plus

                                                                       
Query: 193 gccgccaccgggctggagcaatggagagtgcagcagatgcaaagcttcccgttcttgcat 252
           ||||||||||| || |||||||||||| | ||||||||||| |||||||||||||| || 
Sbjct: 725 gccgccaccggcctcgagcaatggagactacagcagatgcagagcttcccgttcttccac 784

                                                                       
Query: 253 gcaatgg---accaggtggcgat---ggcgccagcgccggcaatggcaatgccggggatg 306
           || ||||   |||||| ||||||   ||||||| ||||||||||||||||||||||||||
Sbjct: 785 gccatggatcaccaggcggcgatggcggcgccaccgccggcaatggcaatgccggggatg 844

                
Query: 307 ttcca 311
           |||||
Sbjct: 845 ttcca 849


>gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0016H04,
              complete sequence
          Length = 176678

 Score =  113 bits (57), Expect = 1e-21
 Identities = 109/125 (87%), Gaps = 6/125 (4%)
 Strand = Plus / Minus

                                                                          
Query: 193    gccgccaccgggctggagcaatggagagtgcagcagatgcaaagcttcccgttcttgcat 252
              ||||||||||| || |||||||||||| | ||||||||||| |||||||||||||| || 
Sbjct: 144960 gccgccaccggcctcgagcaatggagactacagcagatgcagagcttcccgttcttccac 144901

                                                                          
Query: 253    gcaatgg---accaggtggcgat---ggcgccagcgccggcaatggcaatgccggggatg 306
              || ||||   |||||| ||||||   ||||||| ||||||||||||||||||||||||||
Sbjct: 144900 gccatggatcaccaggcggcgatggcggcgccaccgccggcaatggcaatgccggggatg 144841

                   
Query: 307    ttcca 311
              |||||
Sbjct: 144840 ttcca 144836



 Score = 89.7 bits (45), Expect = 2e-14
 Identities = 51/53 (96%)
 Strand = Plus / Minus

                                                                   
Query: 116    ccaccatgatcttcccccctgccttcttggattcctcaagctggaatgataac 168
              |||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 146093 ccaccatgatcttcccccctgccttcctggattcctcgagctggaatgataac 146041


>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score =  113 bits (57), Expect = 1e-21
 Identities = 109/125 (87%), Gaps = 6/125 (4%)
 Strand = Plus / Minus

                                                                          
Query: 193    gccgccaccgggctggagcaatggagagtgcagcagatgcaaagcttcccgttcttgcat 252
              ||||||||||| || |||||||||||| | ||||||||||| |||||||||||||| || 
Sbjct: 627561 gccgccaccggcctcgagcaatggagactacagcagatgcagagcttcccgttcttccac 627502

                                                                          
Query: 253    gcaatgg---accaggtggcgat---ggcgccagcgccggcaatggcaatgccggggatg 306
              || ||||   |||||| ||||||   ||||||| ||||||||||||||||||||||||||
Sbjct: 627501 gccatggatcaccaggcggcgatggcggcgccaccgccggcaatggcaatgccggggatg 627442

                   
Query: 307    ttcca 311
              |||||
Sbjct: 627441 ttcca 627437



 Score = 89.7 bits (45), Expect = 2e-14
 Identities = 51/53 (96%)
 Strand = Plus / Minus

                                                                   
Query: 116    ccaccatgatcttcccccctgccttcttggattcctcaagctggaatgataac 168
              |||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 628694 ccaccatgatcttcccccctgccttcctggattcctcgagctggaatgataac 628642


>dbj|AK108933.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-A09, full
           insert sequence
          Length = 1520

 Score =  113 bits (57), Expect = 1e-21
 Identities = 109/125 (87%), Gaps = 6/125 (4%)
 Strand = Plus / Plus

                                                                       
Query: 193 gccgccaccgggctggagcaatggagagtgcagcagatgcaaagcttcccgttcttgcat 252
           ||||||||||| || |||||||||||| | ||||||||||| |||||||||||||| || 
Sbjct: 725 gccgccaccggcctcgagcaatggagactacagcagatgcagagcttcccgttcttccac 784

                                                                       
Query: 253 gcaatgg---accaggtggcgat---ggcgccagcgccggcaatggcaatgccggggatg 306
           || ||||   |||||| ||||||   ||||||| ||||||||||||||||||||||||||
Sbjct: 785 gccatggatcaccaggcggcgatggcggcgccaccgccggcaatggcaatgccggggatg 844

                
Query: 307 ttcca 311
           |||||
Sbjct: 845 ttcca 849


>emb|X79935.1|ZMDOF3 Z.mays Dof3 mRNA
          Length = 1230

 Score = 97.6 bits (49), Expect = 6e-17
 Identities = 61/65 (93%)
 Strand = Plus / Plus

                                                                       
Query: 201 cgggctggagcaatggagagtgcagcagatgcaaagcttcccgttcttgcatgcaatgga 260
           |||||||||||| ||||| |||||||||||||| |||||||||||||||||||| |||||
Sbjct: 556 cgggctggagcagtggagggtgcagcagatgcagagcttcccgttcttgcatgcgatgga 615

                
Query: 261 ccagg 265
           |||||
Sbjct: 616 ccagg 620