BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst016b18 (929 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001055875.1| Oryza sativa (japonica cultivar-group) Os03g... 521 e-144 dbj|AK065966.1| Oryza sativa (japonica cultivar-group) cDNA clon... 521 e-144 gb|AY103949.1| Zea mays PCO103424 mRNA sequence 480 e-132 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 283 6e-73 gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbare str... 283 6e-73 >ref|NM_001055875.1| Oryza sativa (japonica cultivar-group) Os03g0210400 (Os03g0210400) mRNA, complete cds Length = 2796 Score = 521 bits (263), Expect = e-144 Identities = 463/530 (87%), Gaps = 6/530 (1%) Strand = Plus / Plus Query: 41 gacaaagaagaaatatcttccatttttttggagtttttggatctctttggggatgcacag 100 ||||| ||||| ||||||||||| ||||| |||||||||||||| |||||||||||||| Sbjct: 2024 gacaaggaagacatatcttccatatttttagagtttttggatctatttggggatgcacaa 2083 Query: 101 tcaatcaagaaggctacaactcggcatacaaatcttttttcacgtaagagaagcattctg 160 | |||||||||||||| | ||||||| | || |||||| || ||||||||||| ||| Sbjct: 2084 gcgatcaagaaggctaccaatcggcatcttactcatttttcgcggaagagaagcatgctg 2143 Query: 161 ccatcaaagaaacgaagagcagatgatggtattatgtcagacagagacaaattggctaaa 220 |||||||||| |||||||| ||||||| ||| |||||||||||||| |||||||||| Sbjct: 2144 tcatcaaagaagcgaagagctgatgatgttatcatgtcagacagagataaattggctagg 2203 Query: 221 actggggatgttactcagccagtcatgggaactgatccaaatgctcctaatcctccagtt 280 | |||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 2204 attggggatggtactcagccagttgtgggaactgatccaaatgctcataatcctccagtt 2263 Query: 281 tggcctgcgacttctgaagcatcggggcaacaatggggtgctgcttatgcacctcaggct 340 ||||| ||||| |||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 2264 tggccagcgacatctgaagcatcggggcaacaatggggagctgcttatgcaccacaggcc 2323 Query: 341 gcgtatccagcatatggaacttatgactacagccatcaaatgcctcaatctgctcctcaa 400 | ||||| || ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2324 acttatcctgcgtatggaacttacgactacagccatcaaatgcctcaatctgctcctcaa 2383 Query: 401 gcagctgcttatggtgcctatcctccaacatactctgctcaggcctacacacaacaaagc 460 ||||||||||| || |||||||||||||||||| | |||||||||||||||||||||| | Sbjct: 2384 gcagctgcttacggcgcctatcctccaacataccccgctcaggcctacacacaacaaacc 2443 Query: 461 tacgcacaacctgcggcaatggccgtggcagcaccagcacccgcagcagcaccagcacca 520 || ||||||||| | |||||||| ||||| |||||||||||||||| ||||| | Sbjct: 2444 tatgcacaaccttcagcaatggcggtggcggcaccagcacccgcagtggcaccgg----- 2498 Query: 521 acagcaacttaccctcagcaacctgcggcagctcctcaaccttattatgg 570 | ||| |||||||||||||||||| ||||||| ||||| |||||||| Sbjct: 2499 -cggcagcttaccctcagcaacctgttgcagctcagcaaccatattatgg 2547 >dbj|AK065966.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047E12, full insert sequence Length = 2797 Score = 521 bits (263), Expect = e-144 Identities = 463/530 (87%), Gaps = 6/530 (1%) Strand = Plus / Plus Query: 41 gacaaagaagaaatatcttccatttttttggagtttttggatctctttggggatgcacag 100 ||||| ||||| ||||||||||| ||||| |||||||||||||| |||||||||||||| Sbjct: 2025 gacaaggaagacatatcttccatatttttagagtttttggatctatttggggatgcacaa 2084 Query: 101 tcaatcaagaaggctacaactcggcatacaaatcttttttcacgtaagagaagcattctg 160 | |||||||||||||| | ||||||| | || |||||| || ||||||||||| ||| Sbjct: 2085 gcgatcaagaaggctaccaatcggcatcttactcatttttcgcggaagagaagcatgctg 2144 Query: 161 ccatcaaagaaacgaagagcagatgatggtattatgtcagacagagacaaattggctaaa 220 |||||||||| |||||||| ||||||| ||| |||||||||||||| |||||||||| Sbjct: 2145 tcatcaaagaagcgaagagctgatgatgttatcatgtcagacagagataaattggctagg 2204 Query: 221 actggggatgttactcagccagtcatgggaactgatccaaatgctcctaatcctccagtt 280 | |||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 2205 attggggatggtactcagccagttgtgggaactgatccaaatgctcataatcctccagtt 2264 Query: 281 tggcctgcgacttctgaagcatcggggcaacaatggggtgctgcttatgcacctcaggct 340 ||||| ||||| |||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 2265 tggccagcgacatctgaagcatcggggcaacaatggggagctgcttatgcaccacaggcc 2324 Query: 341 gcgtatccagcatatggaacttatgactacagccatcaaatgcctcaatctgctcctcaa 400 | ||||| || ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2325 acttatcctgcgtatggaacttacgactacagccatcaaatgcctcaatctgctcctcaa 2384 Query: 401 gcagctgcttatggtgcctatcctccaacatactctgctcaggcctacacacaacaaagc 460 ||||||||||| || |||||||||||||||||| | |||||||||||||||||||||| | Sbjct: 2385 gcagctgcttacggcgcctatcctccaacataccccgctcaggcctacacacaacaaacc 2444 Query: 461 tacgcacaacctgcggcaatggccgtggcagcaccagcacccgcagcagcaccagcacca 520 || ||||||||| | |||||||| ||||| |||||||||||||||| ||||| | Sbjct: 2445 tatgcacaaccttcagcaatggcggtggcggcaccagcacccgcagtggcaccgg----- 2499 Query: 521 acagcaacttaccctcagcaacctgcggcagctcctcaaccttattatgg 570 | ||| |||||||||||||||||| ||||||| ||||| |||||||| Sbjct: 2500 -cggcagcttaccctcagcaacctgttgcagctcagcaaccatattatgg 2548 >gb|AY103949.1| Zea mays PCO103424 mRNA sequence Length = 1035 Score = 480 bits (242), Expect = e-132 Identities = 391/440 (88%), Gaps = 3/440 (0%) Strand = Plus / Plus Query: 41 gacaaagaagaaatatcttccatttttttggagtttttggatctctttggggatgcacag 100 |||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||| || Sbjct: 201 gacaaagaggaaatatcttccatatttttagagtttttggatctctttggggatgcaaag 260 Query: 101 tcaatcaagaaggctacaactcggcatacaaatcttttttcacgtaagagaagcattctg 160 ||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 261 tcaatcaagaaggctttaactcggcatacaactcttttttcatgtaagagaagcattctg 320 Query: 161 ccatcaaagaaacgaagagcagatgatggtattatgtcagacagagacaaattggctaaa 220 |||||||||||||| | ||||||||| | || | |||||||| || ||| | |||||| Sbjct: 321 ccatcaaagaaacggaaagcagatgacactgttgtctcagacagggaaaaaattgctaaa 380 Query: 221 actggggatgttactcagccagtcatgggaactgatccaaatgctcctaatcctccagtt 280 |||| || |||||||| ||| || ||||||||||||||||||| | |||||||| ||| Sbjct: 381 actgtgg---ttactcagtcagccacgggaactgatccaaatgcttccaatcctcctgtt 437 Query: 281 tggcctgcgacttctgaagcatcggggcaacaatggggtgctgcttatgcacctcaggct 340 |||||||| |||||||||||||| |||||||||||||| ||| ||||||||| |||||| Sbjct: 438 tggcctgcaacttctgaagcatctgggcaacaatggggagcttcttatgcacagcaggct 497 Query: 341 gcgtatccagcatatggaacttatgactacagccatcaaatgcctcaatctgctcctcaa 400 || ||||| |||||||||||||| |||||||||||||||||||| || ||||||||||| Sbjct: 498 gcatatcctgcatatggaacttacgactacagccatcaaatgccccagcctgctcctcaa 557 Query: 401 gcagctgcttatggtgcctatcctccaacatactctgctcaggcctacacacaacaaagc 460 |||||||| |||||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 558 gcagctgcctatggtgcttatcctccaacatactctgcacaggcctatacacaacaaagc 617 Query: 461 tacgcacaacctgcggcaat 480 ||| |||| ||||| ||||| Sbjct: 618 tacccacagcctgcagcaat 637 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 283 bits (143), Expect = 6e-73 Identities = 236/267 (88%) Strand = Plus / Minus Query: 72 agtttttggatctctttggggatgcacagtcaatcaagaaggctacaactcggcatacaa 131 ||||||||||||| |||||||||||||| | |||||||||||||| | ||||||| | Sbjct: 5729443 agtttttggatctatttggggatgcacaagcgatcaagaaggctaccaatcggcatctta 5729384 Query: 132 atcttttttcacgtaagagaagcattctgccatcaaagaaacgaagagcagatgatggta 191 || |||||| || ||||||||||| ||| |||||||||| |||||||| ||||||| || Sbjct: 5729383 ctcatttttcgcggaagagaagcatgctgtcatcaaagaagcgaagagctgatgatgtta 5729324 Query: 192 ttatgtcagacagagacaaattggctaaaactggggatgttactcagccagtcatgggaa 251 | |||||||||||||| |||||||||| | |||||||| |||||||||||| |||||| Sbjct: 5729323 tcatgtcagacagagataaattggctaggattggggatggtactcagccagttgtgggaa 5729264 Query: 252 ctgatccaaatgctcctaatcctccagtttggcctgcgacttctgaagcatcggggcaac 311 ||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 5729263 ctgatccaaatgctcataatcctccagtttggccagcgacatctgaagcatcggggcaac 5729204 Query: 312 aatggggtgctgcttatgcacctcagg 338 ||||||| |||||||||||||| |||| Sbjct: 5729203 aatggggagctgcttatgcaccacagg 5729177 Score = 143 bits (72), Expect = 1e-30 Identities = 93/100 (93%) Strand = Plus / Minus Query: 344 tatccagcatatggaacttatgactacagccatcaaatgcctcaatctgctcctcaagca 403 ||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 5728910 tatcctgcgtatggaacttacgactacagccatcaaatgcctcaatctgctcctcaagca 5728851 Query: 404 gctgcttatggtgcctatcctccaacatactctgctcagg 443 |||||||| || |||||||||||||||||| | ||||||| Sbjct: 5728850 gctgcttacggcgcctatcctccaacataccccgctcagg 5728811 Score = 85.7 bits (43), Expect = 3e-13 Identities = 108/130 (83%), Gaps = 6/130 (4%) Strand = Plus / Minus Query: 441 aggcctacacacaacaaagctacgcacaacctgcggcaatggccgtggcagcaccagcac 500 |||||||||||||||||| ||| ||||||||| | |||||||| ||||| |||||||||| Sbjct: 5728714 aggcctacacacaacaaacctatgcacaaccttcagcaatggcggtggcggcaccagcac 5728655 Query: 501 ccgcagcagcaccagcaccaacagcaacttaccctcagcaacctgcggcagctcctcaac 560 |||||| ||||| | | ||| |||||||||||||||||| ||||||| |||| Sbjct: 5728654 ccgcagtggcaccgg------cggcagcttaccctcagcaacctgttgcagctcagcaac 5728601 Query: 561 cttattatgg 570 | |||||||| Sbjct: 5728600 catattatgg 5728591 >gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0021B21, from chromosome 3, complete sequence Length = 166777 Score = 283 bits (143), Expect = 6e-73 Identities = 236/267 (88%) Strand = Plus / Plus Query: 72 agtttttggatctctttggggatgcacagtcaatcaagaaggctacaactcggcatacaa 131 ||||||||||||| |||||||||||||| | |||||||||||||| | ||||||| | Sbjct: 100941 agtttttggatctatttggggatgcacaagcgatcaagaaggctaccaatcggcatctta 101000 Query: 132 atcttttttcacgtaagagaagcattctgccatcaaagaaacgaagagcagatgatggta 191 || |||||| || ||||||||||| ||| |||||||||| |||||||| ||||||| || Sbjct: 101001 ctcatttttcgcggaagagaagcatgctgtcatcaaagaagcgaagagctgatgatgtta 101060 Query: 192 ttatgtcagacagagacaaattggctaaaactggggatgttactcagccagtcatgggaa 251 | |||||||||||||| |||||||||| | |||||||| |||||||||||| |||||| Sbjct: 101061 tcatgtcagacagagataaattggctaggattggggatggtactcagccagttgtgggaa 101120 Query: 252 ctgatccaaatgctcctaatcctccagtttggcctgcgacttctgaagcatcggggcaac 311 ||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 101121 ctgatccaaatgctcataatcctccagtttggccagcgacatctgaagcatcggggcaac 101180 Query: 312 aatggggtgctgcttatgcacctcagg 338 ||||||| |||||||||||||| |||| Sbjct: 101181 aatggggagctgcttatgcaccacagg 101207 Score = 143 bits (72), Expect = 1e-30 Identities = 93/100 (93%) Strand = Plus / Plus Query: 344 tatccagcatatggaacttatgactacagccatcaaatgcctcaatctgctcctcaagca 403 ||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 101474 tatcctgcgtatggaacttacgactacagccatcaaatgcctcaatctgctcctcaagca 101533 Query: 404 gctgcttatggtgcctatcctccaacatactctgctcagg 443 |||||||| || |||||||||||||||||| | ||||||| Sbjct: 101534 gctgcttacggcgcctatcctccaacataccccgctcagg 101573 Score = 85.7 bits (43), Expect = 3e-13 Identities = 108/130 (83%), Gaps = 6/130 (4%) Strand = Plus / Plus Query: 441 aggcctacacacaacaaagctacgcacaacctgcggcaatggccgtggcagcaccagcac 500 |||||||||||||||||| ||| ||||||||| | |||||||| ||||| |||||||||| Sbjct: 101670 aggcctacacacaacaaacctatgcacaaccttcagcaatggcggtggcggcaccagcac 101729 Query: 501 ccgcagcagcaccagcaccaacagcaacttaccctcagcaacctgcggcagctcctcaac 560 |||||| ||||| | | ||| |||||||||||||||||| ||||||| |||| Sbjct: 101730 ccgcagtggcaccgg------cggcagcttaccctcagcaacctgttgcagctcagcaac 101783 Query: 561 cttattatgg 570 | |||||||| Sbjct: 101784 catattatgg 101793