BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst015m21 (1013 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 504 e-139 dbj|AP003898.3| Oryza sativa (japonica cultivar-group) genomic D... 504 e-139 dbj|AP004617.2| Oryza sativa (japonica cultivar-group) genomic D... 504 e-139 ref|NM_001068385.1| Oryza sativa (japonica cultivar-group) Os08g... 502 e-138 gb|AF291748.1|AF291748 Zea mays high mobility group I/Y-2 mRNA, ... 325 2e-85 >dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 504 bits (254), Expect = e-139 Identities = 429/490 (87%), Gaps = 18/490 (3%) Strand = Plus / Minus Query: 241 agatgatactggcggcgatcgaggcgctgaacgacaagaacgggtcgaacaagtcggcga 300 |||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||| Sbjct: 20650572 agatgatactggcggcgatcgaggggctgaacgagaagagcgggtcgaacaagtcggcga 20650513 Query: 301 tctccaagtacatcgaggacaagtacggcgatctgccgccggcgcacgcgtcgctgctga 360 ||||||||| |||||||| |||||||| || |||||||||||||||||||||||||| | Sbjct: 20650512 tctccaagttcatcgaggggaagtacggggacctgccgccggcgcacgcgtcgctgctca 20650453 Query: 361 cggcgcacctggcgcgcatgaaggagtccggcgagctcatcttcctcaagaacaactact 420 ||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 20650452 cggcgcacctggccaggatgaaggagtccggtgagctcatcttcctcaagaacaactact 20650393 Query: 421 tccgggctgacgcgcccgacgcgccacccaagcgtggccgcggccgcccgcccaagccca 480 |||| || ||||||||||||||||| |||||||| ||||| |||||||| |||||||| Sbjct: 20650392 tccgcgccgacgcgcccgacgcgccgcccaagcgcggccggggccgcccccccaagccgc 20650333 Query: 481 gggaccccaacgcgccgtctcctccgcccaagtcgtcctccccgcgcccccgcggtcgcc 540 ||||||||||||||||| | || ||||||||| | ||||| |||||||||||||| |||| Sbjct: 20650332 gggaccccaacgcgccgccgccgccgcccaagccctcctcgccgcgcccccgcggccgcc 20650273 Query: 541 cgcccaaggccaaggaccccctcgccgaggccacctccggcacgcccaaggcccgcggcc 600 |||||||| ||||||||||| || |||| |||| | |||||| ||||||||| Sbjct: 20650272 cgcccaagtccaaggaccccatctccgacgccatc---------cccaagtcccgcggcc 20650222 Query: 601 gccagcccaagaaggccaagaccgcccccgccc---------ccgccgccgacggctccg 651 ||| |||||||||||||||||| || ||||||| |||||| ||||||||||| Sbjct: 20650221 gcccgcccaagaaggccaagacggctcccgcccctcctcccgccgccggcgacggctccg 20650162 Query: 652 cctccgtcaagcgcggccgcggccggccccccaaggtacgccccgccgtgcccagcgaga 711 | ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 20650161 ctcccgtcaagcgcggccgcggccggccacccaaggtacgccccgccgtccccagcgagg 20650102 Query: 712 cggcggcggc 721 |||||||||| Sbjct: 20650101 cggcggcggc 20650092 >dbj|AP003898.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1663_D06 Length = 139103 Score = 504 bits (254), Expect = e-139 Identities = 429/490 (87%), Gaps = 18/490 (3%) Strand = Plus / Minus Query: 241 agatgatactggcggcgatcgaggcgctgaacgacaagaacgggtcgaacaagtcggcga 300 |||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||| Sbjct: 124944 agatgatactggcggcgatcgaggggctgaacgagaagagcgggtcgaacaagtcggcga 124885 Query: 301 tctccaagtacatcgaggacaagtacggcgatctgccgccggcgcacgcgtcgctgctga 360 ||||||||| |||||||| |||||||| || |||||||||||||||||||||||||| | Sbjct: 124884 tctccaagttcatcgaggggaagtacggggacctgccgccggcgcacgcgtcgctgctca 124825 Query: 361 cggcgcacctggcgcgcatgaaggagtccggcgagctcatcttcctcaagaacaactact 420 ||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 124824 cggcgcacctggccaggatgaaggagtccggtgagctcatcttcctcaagaacaactact 124765 Query: 421 tccgggctgacgcgcccgacgcgccacccaagcgtggccgcggccgcccgcccaagccca 480 |||| || ||||||||||||||||| |||||||| ||||| |||||||| |||||||| Sbjct: 124764 tccgcgccgacgcgcccgacgcgccgcccaagcgcggccggggccgcccccccaagccgc 124705 Query: 481 gggaccccaacgcgccgtctcctccgcccaagtcgtcctccccgcgcccccgcggtcgcc 540 ||||||||||||||||| | || ||||||||| | ||||| |||||||||||||| |||| Sbjct: 124704 gggaccccaacgcgccgccgccgccgcccaagccctcctcgccgcgcccccgcggccgcc 124645 Query: 541 cgcccaaggccaaggaccccctcgccgaggccacctccggcacgcccaaggcccgcggcc 600 |||||||| ||||||||||| || |||| |||| | |||||| ||||||||| Sbjct: 124644 cgcccaagtccaaggaccccatctccgacgccatc---------cccaagtcccgcggcc 124594 Query: 601 gccagcccaagaaggccaagaccgcccccgccc---------ccgccgccgacggctccg 651 ||| |||||||||||||||||| || ||||||| |||||| ||||||||||| Sbjct: 124593 gcccgcccaagaaggccaagacggctcccgcccctcctcccgccgccggcgacggctccg 124534 Query: 652 cctccgtcaagcgcggccgcggccggccccccaaggtacgccccgccgtgcccagcgaga 711 | ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 124533 ctcccgtcaagcgcggccgcggccggccacccaaggtacgccccgccgtccccagcgagg 124474 Query: 712 cggcggcggc 721 |||||||||| Sbjct: 124473 cggcggcggc 124464 >dbj|AP004617.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0479C08 Length = 152460 Score = 504 bits (254), Expect = e-139 Identities = 429/490 (87%), Gaps = 18/490 (3%) Strand = Plus / Minus Query: 241 agatgatactggcggcgatcgaggcgctgaacgacaagaacgggtcgaacaagtcggcga 300 |||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||| Sbjct: 23025 agatgatactggcggcgatcgaggggctgaacgagaagagcgggtcgaacaagtcggcga 22966 Query: 301 tctccaagtacatcgaggacaagtacggcgatctgccgccggcgcacgcgtcgctgctga 360 ||||||||| |||||||| |||||||| || |||||||||||||||||||||||||| | Sbjct: 22965 tctccaagttcatcgaggggaagtacggggacctgccgccggcgcacgcgtcgctgctca 22906 Query: 361 cggcgcacctggcgcgcatgaaggagtccggcgagctcatcttcctcaagaacaactact 420 ||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 22905 cggcgcacctggccaggatgaaggagtccggtgagctcatcttcctcaagaacaactact 22846 Query: 421 tccgggctgacgcgcccgacgcgccacccaagcgtggccgcggccgcccgcccaagccca 480 |||| || ||||||||||||||||| |||||||| ||||| |||||||| |||||||| Sbjct: 22845 tccgcgccgacgcgcccgacgcgccgcccaagcgcggccggggccgcccccccaagccgc 22786 Query: 481 gggaccccaacgcgccgtctcctccgcccaagtcgtcctccccgcgcccccgcggtcgcc 540 ||||||||||||||||| | || ||||||||| | ||||| |||||||||||||| |||| Sbjct: 22785 gggaccccaacgcgccgccgccgccgcccaagccctcctcgccgcgcccccgcggccgcc 22726 Query: 541 cgcccaaggccaaggaccccctcgccgaggccacctccggcacgcccaaggcccgcggcc 600 |||||||| ||||||||||| || |||| |||| | |||||| ||||||||| Sbjct: 22725 cgcccaagtccaaggaccccatctccgacgccatc---------cccaagtcccgcggcc 22675 Query: 601 gccagcccaagaaggccaagaccgcccccgccc---------ccgccgccgacggctccg 651 ||| |||||||||||||||||| || ||||||| |||||| ||||||||||| Sbjct: 22674 gcccgcccaagaaggccaagacggctcccgcccctcctcccgccgccggcgacggctccg 22615 Query: 652 cctccgtcaagcgcggccgcggccggccccccaaggtacgccccgccgtgcccagcgaga 711 | ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 22614 ctcccgtcaagcgcggccgcggccggccacccaaggtacgccccgccgtccccagcgagg 22555 Query: 712 cggcggcggc 721 |||||||||| Sbjct: 22554 cggcggcggc 22545 >ref|NM_001068385.1| Oryza sativa (japonica cultivar-group) Os08g0428800 (Os08g0428800) mRNA, complete cds Length = 1416 Score = 502 bits (253), Expect = e-138 Identities = 434/497 (87%), Gaps = 18/497 (3%) Strand = Plus / Plus Query: 199 ccgacgaagctgccaagccgccgccgctcccgccctaccccgagatgatactggcggcga 258 |||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 11 ccgacgaagcctccaagccgccgcctctcccgccctacccggagatgatactggcggcga 70 Query: 259 tcgaggcgctgaacgacaagaacgggtcgaacaagtcggcgatctccaagtacatcgagg 318 |||||| ||||||||| |||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 71 tcgaggggctgaacgagaagagcgggtcgaacaagtcggcgatctccaagttcatcgagg 130 Query: 319 acaagtacggcgatctgccgccggcgcacgcgtcgctgctgacggcgcacctggcgcgca 378 |||||||| || |||||||||||||||||||||||||| |||||||||||||| | | Sbjct: 131 ggaagtacggggacctgccgccggcgcacgcgtcgctgctcacggcgcacctggccagga 190 Query: 379 tgaaggagtccggcgagctcatcttcctcaagaacaactacttccgggctgacgcgcccg 438 ||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 191 tgaaggagtccggtgagctcatcttcctcaagaacaactacttccgcgccgacgcgcccg 250 Query: 439 acgcgccacccaagcgtggccgcggccgcccgcccaagcccagggaccccaacgcgccgt 498 ||||||| |||||||| ||||| |||||||| |||||||| ||||||||||||||||| Sbjct: 251 acgcgccgcccaagcgcggccggggccgcccccccaagccgcgggaccccaacgcgccgc 310 Query: 499 ctcctccgcccaagtcgtcctccccgcgcccccgcggtcgcccgcccaaggccaaggacc 558 | || ||||||||| | ||||| |||||||||||||| |||||||||||| ||||||||| Sbjct: 311 cgccgccgcccaagccctcctcgccgcgcccccgcggccgcccgcccaagtccaaggacc 370 Query: 559 ccctcgccgaggccacctccggcacgcccaaggcccgcggccgccagcccaagaaggcca 618 || || |||| |||| | |||||| |||||||||||| |||||||||||||| Sbjct: 371 ccatctccgacgccatc---------cccaagtcccgcggccgcccgcccaagaaggcca 421 Query: 619 agaccgcccccgccc---------ccgccgccgacggctccgcctccgtcaagcgcggcc 669 |||| || ||||||| |||||| |||||||||||| ||||||||||||||| Sbjct: 422 agacggctcccgcccctcctcccgccgccggcgacggctccgctcccgtcaagcgcggcc 481 Query: 670 gcggccggccccccaag 686 |||||||||| |||||| Sbjct: 482 gcggccggccacccaag 498 >gb|AF291748.1|AF291748 Zea mays high mobility group I/Y-2 mRNA, complete cds Length = 1084 Score = 325 bits (164), Expect = 2e-85 Identities = 290/332 (87%) Strand = Plus / Plus Query: 184 tcgtcgccatggccaccgacgaagctgccaagccgccgccgctcccgccctaccccgaga 243 ||||||||||||||||||||||||| |||||||| | ||| |||| ||||| ||||||| Sbjct: 83 tcgtcgccatggccaccgacgaagccaccaagccgtccccgatcccaccctatcccgaga 142 Query: 244 tgatactggcggcgatcgaggcgctgaacgacaagaacgggtcgaacaagtcggcgatct 303 |||| |||||||||||||||| || ||||||||| ||||||||||||||| || |||| Sbjct: 143 tgatcctggcggcgatcgagggtctagacgacaagagcgggtcgaacaagtccgccatct 202 Query: 304 ccaagtacatcgaggacaagtacggcgatctgccgccggcgcacgcgtcgctgctgacgg 363 ||||||||||||||| |||||||||| ||||| || |||||||||||||||||||| | Sbjct: 203 ccaagtacatcgagggcaagtacggctcgctgccccccgcgcacgcgtcgctgctgaccg 262 Query: 364 cgcacctggcgcgcatgaaggagtccggcgagctcatcttcctcaagaacaactacttcc 423 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 263 cgcacctggcgcgcatgaaggagtccggagagctcgtcttcctcaagaacaactacttcc 322 Query: 424 gggctgacgcgcccgacgcgccacccaagcgtggccgcggccgcccgcccaagcccaggg 483 | || | ||| ||||||||||| || ||||| || ||||| ||||| |||||| | ||| Sbjct: 323 gcgcgggcgcccccgacgcgccgccgaagcgcgggcgcgggcgccctcccaaggcgcggg 382 Query: 484 accccaacgcgccgtctcctccgcccaagtcg 515 |||| ||||||||| | || ||||||||||| Sbjct: 383 acccgaacgcgccggcgccggcgcccaagtcg 414 Score = 123 bits (62), Expect = 1e-24 Identities = 92/102 (90%) Strand = Plus / Plus Query: 624 gcccccgcccccgccgccgacggctccgcctccgtcaagcgcggccgcggccggcccccc 683 ||||| ||||| || | |||||| ||| || ||| |||||||||||||||| |||||||| Sbjct: 571 gcccctgcccctgctggcgacgggtccacccccggcaagcgcggccgcggcaggcccccc 630 Query: 684 aaggtacgccccgccgtgcccagcgagacggcggcggcttga 725 |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 631 aaggtacgccccgccgtgcccagcgagacggccgcggcttga 672