BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst015g01 (850 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001056288.1| Oryza sativa (japonica cultivar-group) Os03g... 474 e-130 dbj|AK070169.1| Oryza sativa (japonica cultivar-group) cDNA clon... 466 e-128 gb|DQ245267.1| Zea mays clone 14147 mRNA sequence 232 2e-57 gb|BT017509.1| Zea mays clone EL01N0417E06.c mRNA sequence 216 1e-52 gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genom... 200 7e-48 >ref|NM_001056288.1| Oryza sativa (japonica cultivar-group) Os03g0283300 (Os03g0283300) mRNA, complete cds Length = 1037 Score = 474 bits (239), Expect = e-130 Identities = 398/450 (88%), Gaps = 12/450 (2%) Strand = Plus / Plus Query: 178 ccacgccagcccaaaaccctaccgcggccgcgggggccggcg---gcggggccacggatc 234 ||||||||||||||||||||||||| ||||||||||| | || ||||||||||||||| Sbjct: 210 ccacgccagcccaaaaccctaccgctgccgcgggggcggccgctggcggggccacggatc 269 Query: 235 tggataagaagatgcgccgcgcggagcggttcgggacgccggtggtgatgtccgaggagg 294 |||| ||||||||||||||||| ||||||||||||||| | ||||||||||||||||||| Sbjct: 270 tggagaagaagatgcgccgcgctgagcggttcgggacggccgtggtgatgtccgaggagg 329 Query: 295 agaagcgcagcaaccgcgccgagaggtttgggactggttcttcaaatgagaagatggagg 354 |||||||||||| |||||||||||||||||||||||| ||||||||||| ||| ||||| Sbjct: 330 agaagcgcagcagccgcgccgagaggtttgggactggatcttcaaatgaaaaggcggagg 389 Query: 355 aacagaagaggaagtccagggctgagaggtttggcattccctcatcctcttctgctgatg 414 |||| ||||||||||||||||||||||| |||||| || ||||| ||||||||||| | Sbjct: 390 aacaaaagaggaagtccagggctgagagatttggccttgcctca---tcttctgctgacg 446 Query: 415 aagatgctaagaaaaaagctcgtttagaacgatttggtcagaatacaaacgttgacaagg 474 |||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 447 aagacgctaagaaaaaagctcgtttagaacgatttggtcagagtacaaatgttgacaagg 506 Query: 475 cagaagaagagaaaagaaaggtgcgagccctcaggtttgcggaaacacctagtggatcgt 534 ||||||||||||||||||| ||||| || |||||||| |||||| |||||||| | | Sbjct: 507 gggaagaagagaaaagaaaggcacgagctcttaggtttgcagaaacatctagtggaccat 566 Query: 535 ctgaaggaaatggcaaggacaactccaagcc------ggatgcagccactgtggctggca 588 || ||| ||||||||| |||| ||||||||| ||| || ||||||||||| |||| Sbjct: 567 ctcaagaaaatggcaaagacagctccaagccgacgcaggacgcggccactgtggcaggca 626 Query: 589 cagcatgatggaagcactccctgctttttg 618 | |||| ||||||||||||||||| ||||| Sbjct: 627 cggcataatggaagcactccctgccttttg 656 >dbj|AK070169.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042P16, full insert sequence Length = 1038 Score = 466 bits (235), Expect = e-128 Identities = 397/450 (88%), Gaps = 12/450 (2%) Strand = Plus / Plus Query: 178 ccacgccagcccaaaaccctaccgcggccgcgggggccggcg---gcggggccacggatc 234 ||||||||||||||||||||||||| ||||||||||| | || ||||||||||||||| Sbjct: 211 ccacgccagcccaaaaccctaccgctgccgcgggggcggccgctggcggggccacggatc 270 Query: 235 tggataagaagatgcgccgcgcggagcggttcgggacgccggtggtgatgtccgaggagg 294 |||| ||||||||||||||||| ||||||||||||||| | ||||||||||||||||||| Sbjct: 271 tggagaagaagatgcgccgcgctgagcggttcgggacggccgtggtgatgtccgaggagg 330 Query: 295 agaagcgcagcaaccgcgccgagaggtttgggactggttcttcaaatgagaagatggagg 354 |||||||||||| |||||||||||||||||||||||| ||||||||||| ||| ||||| Sbjct: 331 agaagcgcagcagccgcgccgagaggtttgggactggatcttcaaatgaaaaggcggagg 390 Query: 355 aacagaagaggaagtccagggctgagaggtttggcattccctcatcctcttctgctgatg 414 |||| ||||||||||||||||||||||| |||||| || ||||| ||||||||||| | Sbjct: 391 aacaaaagaggaagtccagggctgagagatttggccttgcctca---tcttctgctgacg 447 Query: 415 aagatgctaagaaaaaagctcgtttagaacgatttggtcagaatacaaacgttgacaagg 474 |||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 448 aagacgctaagaaaaaagctcgtttagaacgatttggtcagagtacaaatgttgacaagg 507 Query: 475 cagaagaagagaaaagaaaggtgcgagccctcaggtttgcggaaacacctagtggatcgt 534 ||||||||||||||||||| ||||| || |||||||| |||||| |||||||| | | Sbjct: 508 gggaagaagagaaaagaaaggcacgagctcttaggtttgcagaaacatctagtggaccat 567 Query: 535 ctgaaggaaatggcaaggacaactccaagcc------ggatgcagccactgtggctggca 588 || ||| ||||||||| ||| ||||||||| ||| || ||||||||||| |||| Sbjct: 568 ctcaagaaaatggcaaagactgctccaagccgacgcaggacgcggccactgtggcaggca 627 Query: 589 cagcatgatggaagcactccctgctttttg 618 | |||| ||||||||||||||||| ||||| Sbjct: 628 cggcataatggaagcactccctgccttttg 657 >gb|DQ245267.1| Zea mays clone 14147 mRNA sequence Length = 948 Score = 232 bits (117), Expect = 2e-57 Identities = 236/275 (85%), Gaps = 3/275 (1%) Strand = Plus / Plus Query: 221 cggggccacggatctggataagaagatgcgccgcgcggagcggttcgggacgccggtggt 280 ||||||||||||||| || |||||||||||||||||||||||||| |||| ||| || | Sbjct: 220 cggggccacggatctagagaagaagatgcgccgcgcggagcggtttgggatgccagtact 279 Query: 281 gatgtccgaggaggagaagcgcagcaaccgcgccgagaggtttgggactggttcttcaaa 340 |||||| |||||||| |||||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 280 gatgtcagaggaggaaaagcgcagcagtcgcgccgagagatttgggactggctcttcaag 339 Query: 341 tgagaagatggaggaacagaagaggaagtccagggctgagaggtttggcattccctcatc 400 || || ||||||| |||||| ||||||||||||||||||||||||| || |||| | Sbjct: 340 tgtaaa---ggaggaagagaagaagaagtccagggctgagaggtttggccttgcctcgcc 396 Query: 401 ctcttctgctgatgaagatgctaagaaaaaagctcgtttagaacgatttggtcagaatac 460 ||||||| | ||||| || ||||||||||| || ||||| |||||||||||||||| | Sbjct: 397 ctcttcttcagatgaggaagctaagaaaaaggcccgtttggaacgatttggtcagagcgc 456 Query: 461 aaacgttgacaaggcagaagaagagaaaagaaagg 495 ||| || |||||||| |||||||| |||||||||| Sbjct: 457 aaatgtcgacaaggcggaagaagaaaaaagaaagg 491 >gb|BT017509.1| Zea mays clone EL01N0417E06.c mRNA sequence Length = 962 Score = 216 bits (109), Expect = 1e-52 Identities = 228/267 (85%), Gaps = 3/267 (1%) Strand = Plus / Plus Query: 229 cggatctggataagaagatgcgccgcgcggagcggttcgggacgccggtggtgatgtccg 288 ||||||| || |||||||||||||||||||||||||| |||| ||| || ||||||| | Sbjct: 176 cggatctagagaagaagatgcgccgcgcggagcggtttgggatgccagtactgatgtcag 235 Query: 289 aggaggagaagcgcagcaaccgcgccgagaggtttgggactggttcttcaaatgagaaga 348 ||||||| |||||||||| ||||||||||| ||||||||||| ||||||| || || Sbjct: 236 aggaggaaaagcgcagcagtcgcgccgagagatttgggactggctcttcaagtgtaaa-- 293 Query: 349 tggaggaacagaagaggaagtccagggctgagaggtttggcattccctcatcctcttctg 408 ||||||| |||||| ||||||||||||||||||||||||| || |||| |||||||| Sbjct: 294 -ggaggaagagaagaagaagtccagggctgagaggtttggccttgcctcgccctcttctt 352 Query: 409 ctgatgaagatgctaagaaaaaagctcgtttagaacgatttggtcagaatacaaacgttg 468 | ||||| || ||||||||||| || ||||| |||||||||||||||| |||| || | Sbjct: 353 cagatgaggaagctaagaaaaaggcccgtttggaacgatttggtcagagcgcaaatgtcg 412 Query: 469 acaaggcagaagaagagaaaagaaagg 495 ||||||| |||||||| |||||||||| Sbjct: 413 acaaggcggaagaagaaaaaagaaagg 439 >gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genomic sequence, complete sequence Length = 165113 Score = 200 bits (101), Expect = 7e-48 Identities = 136/147 (92%), Gaps = 3/147 (2%) Strand = Plus / Plus Query: 178 ccacgccagcccaaaaccctaccgcggccgcgggggccggcg---gcggggccacggatc 234 ||||||||||||||||||||||||| ||||||||||| | || ||||||||||||||| Sbjct: 115018 ccacgccagcccaaaaccctaccgctgccgcgggggcggccgctggcggggccacggatc 115077 Query: 235 tggataagaagatgcgccgcgcggagcggttcgggacgccggtggtgatgtccgaggagg 294 |||| ||||||||||||||||| ||||||||||||||| | ||||||||||||||||||| Sbjct: 115078 tggagaagaagatgcgccgcgctgagcggttcgggacggccgtggtgatgtccgaggagg 115137 Query: 295 agaagcgcagcaaccgcgccgagaggt 321 |||||||||||| |||||||||||||| Sbjct: 115138 agaagcgcagcagccgcgccgagaggt 115164 Score = 139 bits (70), Expect = 2e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 402 tcttctgctgatgaagatgctaagaaaaaagctcgtttagaacgatttggtcagaataca 461 ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 117029 tcttctgctgacgaagacgctaagaaaaaagctcgtttagaacgatttggtcagagtaca 117088 Query: 462 aacgttgacaaggcagaagaagagaaaagaaagg 495 || |||||||||| ||||||||||||||||||| Sbjct: 117089 aatgttgacaagggggaagaagagaaaagaaagg 117122 Score = 93.7 bits (47), Expect = 1e-15 Identities = 62/67 (92%) Strand = Plus / Plus Query: 318 aggtttgggactggttcttcaaatgagaagatggaggaacagaagaggaagtccagggct 377 |||||||||||||| ||||||||||| ||| ||||||||| |||||||||||||||||| Sbjct: 116849 aggtttgggactggatcttcaaatgaaaaggcggaggaacaaaagaggaagtccagggct 116908 Query: 378 gagaggt 384 ||||||| Sbjct: 116909 gagaggt 116915