BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst015d13 (790 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT834200.1| Oryza sativa (indica cultivar-group) cDNA clone:... 761 0.0 gb|AY105020.1| Zea mays PCO098402 mRNA sequence 676 0.0 gb|BT016206.1| Zea mays clone Contig39 mRNA sequence 660 0.0 ref|NM_001071334.1| Oryza sativa (japonica cultivar-group) Os10g... 658 0.0 gb|AF093630.1|AF093630 Oryza sativa 60S ribosomal protein L21 (R... 658 0.0 >emb|CT834200.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA042O23, full insert sequence Length = 737 Score = 761 bits (384), Expect = 0.0 Identities = 484/516 (93%), Gaps = 1/516 (0%) Strand = Plus / Plus Query: 72 gggaagatgccggcggggcacgggctgcggtcgcggacgcgtgacctgttcgcgcggccg 131 |||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||| Sbjct: 71 gggaagatgccggcggggcacgggctgcgggcgcggacgcgcgacctcttcgcgcggccg 130 Query: 132 ttccgcaagaaggggtacatcccgctcaccacgtacctgcggacgtacaagaccggcgac 191 |||||||||||||| ||||||||||||||||| |||||| |||||||||||| |||||| Sbjct: 131 ttccgcaagaagggttacatcccgctcaccacctacctgaggacgtacaagatcggcgat 190 Query: 192 tacgtcgacgtcaaggtgaacggcgccgtgcacaagggcatgccgcacaagttctaccac 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 191 tacgtcgacgtcaaggtgaacggcgccgtgcacaagggcatgccgcacaagttctaccac 250 Query: 252 ggccgcaccggacgcgtctggaacgtcacgaagcgtgccatcggcgtcgagatcaacaag 311 ||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 251 ggccgcaccggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaag 310 Query: 312 caggttggtaaccggatcatcaggaagaggattcatgtccgcgtggagcatgtgcagcca 371 ||||| |||||||| ||||||||||||||||| |||||||| ||||||||||| |||||| Sbjct: 311 caggtcggtaaccgcatcatcaggaagaggatccatgtccgtgtggagcatgtccagcca 370 Query: 372 tccaggtgcaccgaggagttccgcctgaggaaagccaagaacgaccagctcaaggctgat 431 |||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||| Sbjct: 371 tccaggtgcaccgaggagctccgcctgaggaaaatcaagaacgatcagctcaaggctgat 430 Query: 432 gccaagacccgtggtgaggtcatcagcaccaagaggcagcctgagggacccaagcctggt 491 |||||| ||||||||||||| |||||||||||||| ||||| ||||||||||| |||||| Sbjct: 431 gccaaggcccgtggtgaggttatcagcaccaagagacagcccgagggacccaaacctggt 490 Query: 492 ttcatggttgaaggtgctacactggaaacagtcacccccattccgtacgatgtggtcaat 551 ||||||||||| |||||||| ||||| || || |||||||||||||| |||||||||||| Sbjct: 491 ttcatggttgagggtgctacgctggagactgttacccccattccgtatgatgtggtcaat 550 Query: 552 gatctcaagggtggttactagaatgccttgtttctt 587 ||||||||||||||||||||||||| |||||||||| Sbjct: 551 gatctcaagggtggttactagaatg-cttgtttctt 585 >gb|AY105020.1| Zea mays PCO098402 mRNA sequence Length = 784 Score = 676 bits (341), Expect = 0.0 Identities = 461/501 (92%) Strand = Plus / Plus Query: 73 ggaagatgccggcggggcacgggctgcggtcgcggacgcgtgacctgttcgcgcggccgt 132 ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| | Sbjct: 95 ggaagatgccggcggggcacgggctgcggtcgcggacccgcgacctgttcgcgcggccct 154 Query: 133 tccgcaagaaggggtacatcccgctcaccacgtacctgcggacgtacaagaccggcgact 192 |||||||||||||||||||||| ||||||||||||||||| || ||||||| |||||||| Sbjct: 155 tccgcaagaaggggtacatcccactcaccacgtacctgcgcacctacaagatcggcgact 214 Query: 193 acgtcgacgtcaaggtgaacggcgccgtgcacaagggcatgccgcacaagttctaccacg 252 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 215 acgtcgacgtcaaggttaacggcgccgtgcacaagggcatgccgcacaagttctaccacg 274 Query: 253 gccgcaccggacgcgtctggaacgtcacgaagcgtgccatcggcgtcgagatcaacaagc 312 |||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 275 gccgcaccgggagcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaagc 334 Query: 313 aggttggtaaccggatcatcaggaagaggattcatgtccgcgtggagcatgtgcagccat 372 ||||| | ||| |||||||||||| |||| |||||||||||||||||||||||||| | Sbjct: 335 aggttaatggccgcatcatcaggaagcggatccatgtccgcgtggagcatgtgcagccct 394 Query: 373 ccaggtgcaccgaggagttccgcctgaggaaagccaagaacgaccagctcaaggctgatg 432 || | ||||| ||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 395 cccgttgcacagaggagttccgcctgaggaaagccaagaatgaccagctcaaggcggatg 454 Query: 433 ccaagacccgtggtgaggtcatcagcaccaagaggcagcctgagggacccaagcctggtt 492 ||||| |||| |||||||| |||||||||||||||||||||| ||||||||| ||||| | Sbjct: 455 ccaaggcccgcggtgaggtgatcagcaccaagaggcagcctgtgggacccaaacctggct 514 Query: 493 tcatggttgaaggtgctacactggaaacagtcacccccattccgtacgatgtggtcaatg 552 |||||||||| ||||||||||| || |||||||| || ||||| || ||||||||||| | Sbjct: 515 tcatggttgagggtgctacactcgagacagtcactcctattccttatgatgtggtcaacg 574 Query: 553 atctcaagggtggttactaga 573 |||||||||| |||||||||| Sbjct: 575 atctcaagggcggttactaga 595 >gb|BT016206.1| Zea mays clone Contig39 mRNA sequence Length = 748 Score = 660 bits (333), Expect = 0.0 Identities = 459/501 (91%) Strand = Plus / Plus Query: 73 ggaagatgccggcggggcacgggctgcggtcgcggacgcgtgacctgttcgcgcggccgt 132 ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| | Sbjct: 59 ggaagatgccggcggggcacgggctgcggtcgcggacccgcgacctgttcgcgcggccct 118 Query: 133 tccgcaagaaggggtacatcccgctcaccacgtacctgcggacgtacaagaccggcgact 192 |||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||| Sbjct: 119 tccgcaagaaggggtacatcccgctcaccacgtacctgcgcacctacaagatcggcgact 178 Query: 193 acgtcgacgtcaaggtgaacggcgccgtgcacaagggcatgccgcacaagttctaccacg 252 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 acgtcgacgtcaaggttaacggcgccgtgcacaagggcatgccgcacaagttctaccacg 238 Query: 253 gccgcaccggacgcgtctggaacgtcacgaagcgtgccatcggcgtcgagatcaacaagc 312 |||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 239 gccgcaccgggagcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaagc 298 Query: 313 aggttggtaaccggatcatcaggaagaggattcatgtccgcgtggagcatgtgcagccat 372 ||||| | ||| |||||||||||| |||| |||||||| ||||||||||||||||| | Sbjct: 299 aggttaatggccgcatcatcaggaagcggatccatgtccgtgtggagcatgtgcagccct 358 Query: 373 ccaggtgcaccgaggagttccgcctgaggaaagccaagaacgaccagctcaaggctgatg 432 || | ||||| ||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 359 cccgttgcacagaggagttccgcctgaggaaagccaagaatgaccagctcaaggcggatg 418 Query: 433 ccaagacccgtggtgaggtcatcagcaccaagaggcagcctgagggacccaagcctggtt 492 ||||| ||| |||||||| |||||||||||||||||||| | ||||||||| ||||| | Sbjct: 419 ccaagctccgcggtgaggtgatcagcaccaagaggcagcccgtgggacccaaacctggct 478 Query: 493 tcatggttgaaggtgctacactggaaacagtcacccccattccgtacgatgtggtcaatg 552 |||||||||| ||||||||||| || |||||||| || ||||| || ||||||||||| | Sbjct: 479 tcatggttgagggtgctacactcgagacagtcactcctattccttatgatgtggtcaacg 538 Query: 553 atctcaagggtggttactaga 573 |||||||||| |||||||||| Sbjct: 539 atctcaagggcggttactaga 559 >ref|NM_001071334.1| Oryza sativa (japonica cultivar-group) Os10g0465800 (Os10g0465800) mRNA, complete cds Length = 717 Score = 658 bits (332), Expect = 0.0 Identities = 455/496 (91%) Strand = Plus / Plus Query: 77 gatgccggcggggcacgggctgcggtcgcggacgcgtgacctgttcgcgcggccgttccg 136 |||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||| | Sbjct: 4 gatgccggcgggccacgggctgcgtgcgcggacgcgcgacctgttcgcgcggccgttcag 63 Query: 137 caagaaggggtacatcccgctcaccacgtacctgcggacgtacaagaccggcgactacgt 196 |||||||||||||||||||||||||| ||||| || || ||||||| |||||| |||| Sbjct: 64 gaagaaggggtacatcccgctcaccacctacctccgcacctacaagatcggcgagcacgt 123 Query: 197 cgacgtcaaggtgaacggcgccgtgcacaagggcatgccgcacaagttctaccacggccg 256 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 124 cgacgtcaaggtgaacggcgccgtgcacaaggggatgccgcacaagttctaccacggccg 183 Query: 257 caccggacgcgtctggaacgtcacgaagcgtgccatcggcgtcgagatcaacaagcaggt 316 |||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 184 caccggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaagcaggt 243 Query: 317 tggtaaccggatcatcaggaagaggattcatgtccgcgtggagcatgtgcagccatccag 376 ||| ||||| || |||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 244 tgggaaccgcattatcaggaagaggatccatgtccgtgtggagcatgtgcagccatccag 303 Query: 377 gtgcaccgaggagttccgcctgaggaaagccaagaacgaccagctcaaggctgatgccaa 436 |||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 304 gtgcactgaggagttccgcctgaggaagatcaagaacgaccagctcaaggcagatgccaa 363 Query: 437 gacccgtggtgaggtcatcagcaccaagaggcagcctgagggacccaagcctggtttcat 496 | | |||||||||||||||||||| ||||||||||| |||| || ||||| || ||||| Sbjct: 364 ggctcgtggtgaggtcatcagcacgaagaggcagccgcagggtcctaagcccggcttcat 423 Query: 497 ggttgaaggtgctacactggaaacagtcacccccattccgtacgatgtggtcaatgatct 556 |||||| ||||| |||||||| || ||||||||||| ||||||||||||||||||||||| Sbjct: 424 ggttgagggtgcaacactggagactgtcacccccatcccgtacgatgtggtcaatgatct 483 Query: 557 caagggtggttactag 572 |||||||||||||||| Sbjct: 484 caagggtggttactag 499 >gb|AF093630.1|AF093630 Oryza sativa 60S ribosomal protein L21 (RPL21) mRNA, complete cds Length = 753 Score = 658 bits (332), Expect = 0.0 Identities = 455/496 (91%) Strand = Plus / Plus Query: 77 gatgccggcggggcacgggctgcggtcgcggacgcgtgacctgttcgcgcggccgttccg 136 ||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||| | Sbjct: 16 gatgccggcggaccacgggctgcgtgcgcggacgcgcgacctgttcgcgcggccgttcag 75 Query: 137 caagaaggggtacatcccgctcaccacgtacctgcggacgtacaagaccggcgactacgt 196 |||||||||||||||||||||||||| ||||| || || ||||||| |||||| |||| Sbjct: 76 gaagaaggggtacatcccgctcaccacctacctccgcacctacaagatcggcgagcacgt 135 Query: 197 cgacgtcaaggtgaacggcgccgtgcacaagggcatgccgcacaagttctaccacggccg 256 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 136 cgacgtcaaggtgaacggcgccgtgcacaaggggatgccgcacaagttctaccacggccg 195 Query: 257 caccggacgcgtctggaacgtcacgaagcgtgccatcggcgtcgagatcaacaagcaggt 316 |||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 196 caccggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaagcaggt 255 Query: 317 tggtaaccggatcatcaggaagaggattcatgtccgcgtggagcatgtgcagccatccag 376 ||| ||||| || |||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 256 tgggaaccgcattatcaggaagaggatccatgtccgtgtggagcatgtgcagccatccag 315 Query: 377 gtgcaccgaggagttccgcctgaggaaagccaagaacgaccagctcaaggctgatgccaa 436 |||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 316 gtgcactgaggagttccgcctgaggaagatcaagaacgaccagctcaaggcagatgccaa 375 Query: 437 gacccgtggtgaggtcatcagcaccaagaggcagcctgagggacccaagcctggtttcat 496 | | |||||||||||||||||||| ||||||||||| |||| || |||||||| ||||| Sbjct: 376 ggctcgtggtgaggtcatcagcacgaagaggcagccgcagggtcctaagcctggcttcat 435 Query: 497 ggttgaaggtgctacactggaaacagtcacccccattccgtacgatgtggtcaatgatct 556 |||||| ||||| |||||||| || ||||||||||| ||||||||||||||||||||||| Sbjct: 436 ggttgagggtgcaacactggagactgtcacccccatcccgtacgatgtggtcaatgatct 495 Query: 557 caagggtggttactag 572 |||||||||||||||| Sbjct: 496 caagggtggttactag 511