BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst014m23
         (688 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|X80265.1|HVSTRPR H.vulgare mRNA for putative structural protein   145   3e-31
emb|CT829204.1| Oryza sativa (indica cultivar-group) cDNA clone:...   143   1e-30
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...   143   1e-30
dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic D...   143   1e-30
gb|BT017349.1| Zea mays clone EL01N0323G05.c mRNA sequence             92   3e-15

>emb|X80265.1|HVSTRPR H.vulgare mRNA for putative structural protein
          Length = 733

 Score =  145 bits (73), Expect = 3e-31
 Identities = 219/266 (82%), Gaps = 15/266 (5%)
 Strand = Plus / Plus

                                                                       
Query: 95  tggtggccgtgctcgttcttgccgtg---gcagcggcgaccagcgccgaggcgaggaaca 151
           ||||||| |||||||| || ||||||   || ||||| ||| ||||||||||||||||||
Sbjct: 50  tggtggcggtgctcgtcctcgccgtgctggccgcggcaaccggcgccgaggcgaggaaca 109

                                                                       
Query: 152 tcaagacgacggaggcggc------cagcaaggacgcggtcgtgcagccgcagaccttcc 205
           |||||||||||||||||||      |||||||||||||||| | |||||   |||||| |
Sbjct: 110 tcaagacgacggaggcggcagctgccagcaaggacgcggtcctccagccaacgacctttc 169

                                                                       
Query: 206 cgcccttcgaccgcttcggaagcgcgtcgccggcctt---cggcggcctgcccggtggca 262
           |||| ||||||||||| ||  ||| ||||||||| ||   ||||||||| |||||  |||
Sbjct: 170 cgccgttcgaccgcttaggcggcgggtcgccggcgttgggcggcggcctccccggcagca 229

                                                                       
Query: 263 gc---atccccgggttcagcctccccggcagcagcggtgtcgccccggggttcggcagca 319
           ||   || ||||| |||||||||||||||||| |||| | | ||||| | |||||| |||
Sbjct: 230 gcggcatgcccggattcagcctccccggcagcggcggcgccaccccgagcttcggcggca 289

                                     
Query: 320 tcggcagcatgcccttcttgggcggc 345
           ||||||||||||||||| | ||||||
Sbjct: 290 tcggcagcatgcccttcctcggcggc 315



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 79/91 (86%), Gaps = 3/91 (3%)
 Strand = Plus / Plus

                                                                       
Query: 351 cggcggctccccggggctaggtggcttcggcggcatgccggggtccccc---gccgccgc 407
           |||||||||||| || || || |||||||||||||||||||| ||||||   || || ||
Sbjct: 330 cggcggctcccccggcctcggcggcttcggcggcatgccgggctcccccgctgcagctgc 389

                                          
Query: 408 cgtcgacgagcacgcgaagaagccgtgaaaa 438
           ||||||||| ||||| |||||||||||||||
Sbjct: 390 cgtcgacgaccacgccaagaagccgtgaaaa 420


>emb|CT829204.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA011L17, full
           insert sequence
          Length = 801

 Score =  143 bits (72), Expect = 1e-30
 Identities = 199/241 (82%), Gaps = 9/241 (3%)
 Strand = Plus / Plus

                                                                       
Query: 172 agcaaggacgcggtcgtgcagccgcagaccttcccgcccttcgaccgcttcggaagcgcg 231
           ||||||||| |||| |||||||||  ||| |||||||| |||||||||||||| ||||||
Sbjct: 177 agcaaggacacggtggtgcagccgacgacgttcccgccgttcgaccgcttcgggagcgcg 236

                                                                       
Query: 232 tcgccggccttcggcggcctgcccggtggcagcatccccgggttcagcctccccggcagc 291
             |||||| ||||||||| |||||||  |||||||||| |||||||||||||||||||||
Sbjct: 237 gtgccggcgttcggcggcatgcccggcagcagcatcccggggttcagcctccccggcagc 296

                                                                       
Query: 292 agcggtgtcgcccc---ggggttcggcagcatcggcagcatgcccttcttgggcggcttc 348
           |||||   | ||||    ||  ||||| || |||||||||||||| | || |||||| ||
Sbjct: 297 agcggctccacccccggcggcctcggcggcttcggcagcatgcccatgttcggcggcctc 356

                                                                       
Query: 349 ggcggcggctccccggggctaggtggcttcggcggcatgccggggtcccccgccgccgcc 408
           ||||||||||| || || || ||      |||||||||||| || |||||||||||||||
Sbjct: 357 ggcggcggctcacctggcctcgg------cggcggcatgcccggctcccccgccgccgcc 410

            
Query: 409 g 409
           |
Sbjct: 411 g 411


>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score =  143 bits (72), Expect = 1e-30
 Identities = 199/241 (82%), Gaps = 9/241 (3%)
 Strand = Plus / Minus

                                                                           
Query: 172     agcaaggacgcggtcgtgcagccgcagaccttcccgcccttcgaccgcttcggaagcgcg 231
               ||||||||| |||| |||||||||  ||| |||||||| |||||||||||||| ||||||
Sbjct: 8305368 agcaaggacacggtggtgcagccgacgacgttcccgccgttcgaccgcttcgggagcgcg 8305309

                                                                           
Query: 232     tcgccggccttcggcggcctgcccggtggcagcatccccgggttcagcctccccggcagc 291
                 |||||| ||||||||| |||||||  |||||||||| |||||||||||||||||||||
Sbjct: 8305308 gtgccggcgttcggcggcatgcccggcagcagcatcccggggttcagcctccccggcagc 8305249

                                                                           
Query: 292     agcggtgtcgcccc---ggggttcggcagcatcggcagcatgcccttcttgggcggcttc 348
               |||||   | ||||    ||  ||||| || |||||||||||||| | || |||||| ||
Sbjct: 8305248 agcggctccacccccggcggcctcggcggcttcggcagcatgcccatgttcggcggcctc 8305189

                                                                           
Query: 349     ggcggcggctccccggggctaggtggcttcggcggcatgccggggtcccccgccgccgcc 408
               ||||||||||| || || || ||      |||||||||||| || |||||||||||||||
Sbjct: 8305188 ggcggcggctcacctggcctcgg------cggcggcatgcccggctcccccgccgccgcc 8305135

                
Query: 409     g 409
               |
Sbjct: 8305134 g 8305134


>dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0434D08
          Length = 161266

 Score =  143 bits (72), Expect = 1e-30
 Identities = 199/241 (82%), Gaps = 9/241 (3%)
 Strand = Plus / Minus

                                                                         
Query: 172   agcaaggacgcggtcgtgcagccgcagaccttcccgcccttcgaccgcttcggaagcgcg 231
             ||||||||| |||| |||||||||  ||| |||||||| |||||||||||||| ||||||
Sbjct: 99299 agcaaggacacggtggtgcagccgacgacgttcccgccgttcgaccgcttcgggagcgcg 99240

                                                                         
Query: 232   tcgccggccttcggcggcctgcccggtggcagcatccccgggttcagcctccccggcagc 291
               |||||| ||||||||| |||||||  |||||||||| |||||||||||||||||||||
Sbjct: 99239 gtgccggcgttcggcggcatgcccggcagcagcatcccggggttcagcctccccggcagc 99180

                                                                         
Query: 292   agcggtgtcgcccc---ggggttcggcagcatcggcagcatgcccttcttgggcggcttc 348
             |||||   | ||||    ||  ||||| || |||||||||||||| | || |||||| ||
Sbjct: 99179 agcggctccacccccggcggcctcggcggcttcggcagcatgcccatgttcggcggcctc 99120

                                                                         
Query: 349   ggcggcggctccccggggctaggtggcttcggcggcatgccggggtcccccgccgccgcc 408
             ||||||||||| || || || ||      |||||||||||| || |||||||||||||||
Sbjct: 99119 ggcggcggctcacctggcctcgg------cggcggcatgcccggctcccccgccgccgcc 99066

              
Query: 409   g 409
             |
Sbjct: 99065 g 99065


>gb|BT017349.1| Zea mays clone EL01N0323G05.c mRNA sequence
          Length = 773

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 81/92 (88%), Gaps = 3/92 (3%)
 Strand = Plus / Plus

                                                                       
Query: 178 gacgcggtcgtgcagccgcagaccttcccgcccttcgaccgctt---cggaagcgcgtcg 234
           |||||||| ||||||||||||||||||||||||||||||||| |   |||  ||||||| 
Sbjct: 107 gacgcggtggtgcagccgcagaccttcccgcccttcgaccgcctcggcggcggcgcgtcc 166

                                           
Query: 235 ccggccttcggcggcctgcccggtggcagcat 266
           ||||| ||||||||||| ||||| ||||||||
Sbjct: 167 ccggcgttcggcggcctccccggcggcagcat 198