BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst014m16 (1297 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001063058.1| Oryza sativa (japonica cultivar-group) Os05g... 470 e-129 dbj|AK072845.1| Oryza sativa (japonica cultivar-group) cDNA clon... 470 e-129 dbj|AK063535.1| Oryza sativa (japonica cultivar-group) cDNA clon... 470 e-129 gb|AF255711.1|AF255711 Oryza sativa putative histone deacetylase... 438 e-119 gb|AC137000.2| Oryza sativa (japonica cultivar-group) chromosome... 224 7e-55 >ref|NM_001063058.1| Oryza sativa (japonica cultivar-group) Os05g0597100 (Os05g0597100) mRNA, complete cds Length = 1283 Score = 470 bits (237), Expect = e-129 Identities = 416/475 (87%), Gaps = 3/475 (0%) Strand = Plus / Plus Query: 103 ccgccgccgccgccgccgataccaatggagttctggggtctcgaagtcaagcctggacag 162 |||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||| Sbjct: 60 ccgccgccgccgccgccgattccgatggagttctggggtcttgaagtcaagcctggacag 119 Query: 163 actgttaagtgtgagcctgaagatgaccactttttgcacctttctcaggctgcacttggg 222 ||||| || ||||||||||||||||| | |||||||||||||||||||||||| |||||| Sbjct: 120 actgtcaaatgtgagcctgaagatgaacgctttttgcacctttctcaggctgctcttggg 179 Query: 223 gaatcaaagaaagcaagtgacagcacgttgatgtatgttaaagttgatgatcagaagcta 282 ||||||||||||| | ||||| | | |||||||||||| ||||||||| |||||| Sbjct: 180 gaatcaaagaaaggatctgacaatgcagtaatgtatgttaaaactgatgatcaaaagcta 239 Query: 283 gccattggaaccctctcagctgagaggttccctcaaatccaatttgatttggtcttcgat 342 | ||||||||||||||||||||| | ||||||||||||||| |||||||||||||| || Sbjct: 240 gtcattggaaccctctcagctgacaagttccctcaaatccagtttgatttggtctttgac 299 Query: 343 aaagagtttgaactatcacacacttcaaagactgccagtgtgttcttttctggttacaag 402 ||||||||||| || |||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 300 aaagagtttgagctgtcacacacttcaaagactgctagtgtgttcttttctggctacaaa 359 Query: 403 gtttaccagccagctgagggagatgaaatggattttgattctgaagaagttgaagatgaa 462 |||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 360 gtttcccagccggctgaggaagatgaaatggattttgattctgaagaagttgaagatgaa 419 Query: 463 gaggaggaa---aagaacattccagtgatcaaggaaaatggcaaagctgaaggaaagggg 519 ||||||||| |||| |||||||| || || ||||||||||| |||||| |||| Sbjct: 420 gaggaggaagaaaagatcattccagctcccagggcaaatggcaaagttgaagggaaggaa 479 Query: 520 aaggagcagaaaagtcaggtgaagattgatgctgcagcttccaaatcaaaggctg 574 || |||||||||| || | |||| ||| || ||||||| ||||||||||||| Sbjct: 480 aatgagcagaaaaaacaaggcaagacagattcttcagcttcaaaatcaaaggctg 534 Score = 214 bits (108), Expect = 7e-52 Identities = 197/228 (86%), Gaps = 9/228 (3%) Strand = Plus / Plus Query: 690 tgaggaggattccagtgaagatgatgaggatgagagtgatgaggatgacaaagaagaaac 749 |||||| |||||||| ||||||||||||||||||||||| ||||| ||| || Sbjct: 626 tgaggatgattccagcgaagatgatgaggatgagagtgacgagga---------agatac 676 Query: 750 tcccaagaagccagagactgggaagaagagagcagctgaaagtgcgttgaagacacctgc 809 ||||||||||||||||||||| |||| || || |||||||| || ||||||||||||| | Sbjct: 677 tcccaagaagccagagactggaaagaggaaagtagctgaaattgtgttgaagacaccttc 736 Query: 810 gtctgataagaaggcaaaggttggaacaccatctggccagaagacaggcgccaagaaggg 869 |||||||||||| |||||| ||| ||||| || |||||||||||||| | ||||||||| Sbjct: 737 gtctgataagaaagcaaagattgctacaccgtcaggccagaagacaggtgacaagaaggg 796 Query: 870 tgtccatgtggcaactccacatccggcgaagcaggcgagcaagacccc 917 ||||||||| ||||||||||||||||| |||||||| ||||||||||| Sbjct: 797 tgtccatgtagcaactccacatccggcaaagcaggctagcaagacccc 844 >dbj|AK072845.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023142J09, full insert sequence Length = 1284 Score = 470 bits (237), Expect = e-129 Identities = 416/475 (87%), Gaps = 3/475 (0%) Strand = Plus / Plus Query: 103 ccgccgccgccgccgccgataccaatggagttctggggtctcgaagtcaagcctggacag 162 |||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||| Sbjct: 61 ccgccgccgccgccgccgattccgatggagttctggggtcttgaagtcaagcctggacag 120 Query: 163 actgttaagtgtgagcctgaagatgaccactttttgcacctttctcaggctgcacttggg 222 ||||| || ||||||||||||||||| | |||||||||||||||||||||||| |||||| Sbjct: 121 actgtcaaatgtgagcctgaagatgaacgctttttgcacctttctcaggctgctcttggg 180 Query: 223 gaatcaaagaaagcaagtgacagcacgttgatgtatgttaaagttgatgatcagaagcta 282 ||||||||||||| | ||||| | | |||||||||||| ||||||||| |||||| Sbjct: 181 gaatcaaagaaaggatctgacaatgcagtaatgtatgttaaaactgatgatcaaaagcta 240 Query: 283 gccattggaaccctctcagctgagaggttccctcaaatccaatttgatttggtcttcgat 342 | ||||||||||||||||||||| | ||||||||||||||| |||||||||||||| || Sbjct: 241 gtcattggaaccctctcagctgacaagttccctcaaatccagtttgatttggtctttgac 300 Query: 343 aaagagtttgaactatcacacacttcaaagactgccagtgtgttcttttctggttacaag 402 ||||||||||| || |||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 301 aaagagtttgagctgtcacacacttcaaagactgctagtgtgttcttttctggctacaaa 360 Query: 403 gtttaccagccagctgagggagatgaaatggattttgattctgaagaagttgaagatgaa 462 |||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 361 gtttcccagccggctgaggaagatgaaatggattttgattctgaagaagttgaagatgaa 420 Query: 463 gaggaggaa---aagaacattccagtgatcaaggaaaatggcaaagctgaaggaaagggg 519 ||||||||| |||| |||||||| || || ||||||||||| |||||| |||| Sbjct: 421 gaggaggaagaaaagatcattccagctcccagggcaaatggcaaagttgaagggaaggaa 480 Query: 520 aaggagcagaaaagtcaggtgaagattgatgctgcagcttccaaatcaaaggctg 574 || |||||||||| || | |||| ||| || ||||||| ||||||||||||| Sbjct: 481 aatgagcagaaaaaacaaggcaagacagattcttcagcttcaaaatcaaaggctg 535 Score = 214 bits (108), Expect = 7e-52 Identities = 197/228 (86%), Gaps = 9/228 (3%) Strand = Plus / Plus Query: 690 tgaggaggattccagtgaagatgatgaggatgagagtgatgaggatgacaaagaagaaac 749 |||||| |||||||| ||||||||||||||||||||||| ||||| ||| || Sbjct: 627 tgaggatgattccagcgaagatgatgaggatgagagtgacgagga---------agatac 677 Query: 750 tcccaagaagccagagactgggaagaagagagcagctgaaagtgcgttgaagacacctgc 809 ||||||||||||||||||||| |||| || || |||||||| || ||||||||||||| | Sbjct: 678 tcccaagaagccagagactggaaagaggaaagtagctgaaattgtgttgaagacaccttc 737 Query: 810 gtctgataagaaggcaaaggttggaacaccatctggccagaagacaggcgccaagaaggg 869 |||||||||||| |||||| ||| ||||| || |||||||||||||| | ||||||||| Sbjct: 738 gtctgataagaaagcaaagattgctacaccgtcaggccagaagacaggtgacaagaaggg 797 Query: 870 tgtccatgtggcaactccacatccggcgaagcaggcgagcaagacccc 917 ||||||||| ||||||||||||||||| |||||||| ||||||||||| Sbjct: 798 tgtccatgtagcaactccacatccggcaaagcaggctagcaagacccc 845 >dbj|AK063535.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-B10, full insert sequence Length = 1161 Score = 470 bits (237), Expect = e-129 Identities = 416/475 (87%), Gaps = 3/475 (0%) Strand = Plus / Plus Query: 103 ccgccgccgccgccgccgataccaatggagttctggggtctcgaagtcaagcctggacag 162 |||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||| Sbjct: 62 ccgccgccgccgccgccgattccgatggagttctggggtcttgaagtcaagcctggacag 121 Query: 163 actgttaagtgtgagcctgaagatgaccactttttgcacctttctcaggctgcacttggg 222 ||||| || ||||||||||||||||| | |||||||||||||||||||||||| |||||| Sbjct: 122 actgtcaaatgtgagcctgaagatgaacgctttttgcacctttctcaggctgctcttggg 181 Query: 223 gaatcaaagaaagcaagtgacagcacgttgatgtatgttaaagttgatgatcagaagcta 282 ||||||||||||| | ||||| | | |||||||||||| ||||||||| |||||| Sbjct: 182 gaatcaaagaaaggatctgacaatgcagtaatgtatgttaaaactgatgatcaaaagcta 241 Query: 283 gccattggaaccctctcagctgagaggttccctcaaatccaatttgatttggtcttcgat 342 | ||||||||||||||||||||| | ||||||||||||||| |||||||||||||| || Sbjct: 242 gtcattggaaccctctcagctgacaagttccctcaaatccagtttgatttggtctttgac 301 Query: 343 aaagagtttgaactatcacacacttcaaagactgccagtgtgttcttttctggttacaag 402 ||||||||||| || |||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 302 aaagagtttgagctgtcacacacttcaaagactgctagtgtgttcttttctggctacaaa 361 Query: 403 gtttaccagccagctgagggagatgaaatggattttgattctgaagaagttgaagatgaa 462 |||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 362 gtttcccagccggctgaggaagatgaaatggattttgattctgaagaagttgaagatgaa 421 Query: 463 gaggaggaa---aagaacattccagtgatcaaggaaaatggcaaagctgaaggaaagggg 519 ||||||||| |||| |||||||| || || ||||||||||| |||||| |||| Sbjct: 422 gaggaggaagaaaagatcattccagctcccagggcaaatggcaaagttgaagggaaggaa 481 Query: 520 aaggagcagaaaagtcaggtgaagattgatgctgcagcttccaaatcaaaggctg 574 || |||||||||| || | |||| ||| || ||||||| ||||||||||||| Sbjct: 482 aatgagcagaaaaaacaaggcaagacagattcttcagcttcaaaatcaaaggctg 536 Score = 214 bits (108), Expect = 7e-52 Identities = 197/228 (86%), Gaps = 9/228 (3%) Strand = Plus / Plus Query: 690 tgaggaggattccagtgaagatgatgaggatgagagtgatgaggatgacaaagaagaaac 749 |||||| |||||||| ||||||||||||||||||||||| ||||| ||| || Sbjct: 628 tgaggatgattccagcgaagatgatgaggatgagagtgacgagga---------agatac 678 Query: 750 tcccaagaagccagagactgggaagaagagagcagctgaaagtgcgttgaagacacctgc 809 ||||||||||||||||||||| |||| || || |||||||| || ||||||||||||| | Sbjct: 679 tcccaagaagccagagactggaaagaggaaagtagctgaaattgtgttgaagacaccttc 738 Query: 810 gtctgataagaaggcaaaggttggaacaccatctggccagaagacaggcgccaagaaggg 869 |||||||||||| |||||| ||| ||||| || |||||||||||||| | ||||||||| Sbjct: 739 gtctgataagaaagcaaagattgctacaccgtcaggccagaagacaggtgacaagaaggg 798 Query: 870 tgtccatgtggcaactccacatccggcgaagcaggcgagcaagacccc 917 ||||||||| ||||||||||||||||| |||||||| ||||||||||| Sbjct: 799 tgtccatgtagcaactccacatccggcaaagcaggctagcaagacccc 846 >gb|AF255711.1|AF255711 Oryza sativa putative histone deacetylase HD2 mRNA, complete cds Length = 894 Score = 438 bits (221), Expect = e-119 Identities = 394/451 (87%), Gaps = 3/451 (0%) Strand = Plus / Plus Query: 127 atggagttctggggtctcgaagtcaagcctggacagactgttaagtgtgagcctgaagat 186 ||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||| Sbjct: 1 atggagttctggggtcttgaagtcaagcctggacagactgtcaaatgtgagcctgaagat 60 Query: 187 gaccactttttgcacctttctcaggctgcacttggggaatcaaagaaagcaagtgacagc 246 || | |||||||||||||||||||||||| ||||||||||||||||||| | ||||| Sbjct: 61 gaacgctttttgcacctttctcaggctgctcttggggaatcaaagaaaggatctgacaat 120 Query: 247 acgttgatgtatgttaaagttgatgatcagaagctagccattggaaccctctcagctgag 306 | | |||||||||||| ||||||||| ||||||| ||||||||||||||||||||| Sbjct: 121 gcagtaatgtatgttaaaactgatgatcaaaagctagtcattggaaccctctcagctgac 180 Query: 307 aggttccctcaaatccaatttgatttggtcttcgataaagagtttgaactatcacacact 366 | ||||||||||||||| |||||||||||||| || ||||||||||| || ||||||||| Sbjct: 181 aagttccctcaaatccagtttgatttggtctttgacaaagagtttgagctgtcacacact 240 Query: 367 tcaaagactgccagtgtgttcttttctggttacaaggtttaccagccagctgagggagat 426 ||||||||||| ||||||||||||||||| ||||| |||| |||||| ||||||| |||| Sbjct: 241 tcaaagactgctagtgtgttcttttctggctacaaagtttcccagccggctgaggaagat 300 Query: 427 gaaatggattttgattctgaagaagttgaagatgaagaggaggaa---aagaacattcca 483 ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 301 gaaatggattttgattctgaagaagttgaagatgaagaggaggaagaaaagatcattcca 360 Query: 484 gtgatcaaggaaaatggcaaagctgaaggaaaggggaaggagcagaaaagtcaggtgaag 543 | || || ||||||||||| |||||| |||| || |||||||||| || | ||| Sbjct: 361 gctcccagggcaaatggcaaagttgaagggaaggaaaatgagcagaaaaaacaaggcaag 420 Query: 544 attgatgctgcagcttccaaatcaaaggctg 574 | ||| || ||||||| ||||||||||||| Sbjct: 421 acagattcttcagcttcaaaatcaaaggctg 451 Score = 214 bits (108), Expect = 7e-52 Identities = 197/228 (86%), Gaps = 9/228 (3%) Strand = Plus / Plus Query: 690 tgaggaggattccagtgaagatgatgaggatgagagtgatgaggatgacaaagaagaaac 749 |||||| |||||||| ||||||||||||||||||||||| ||||| ||| || Sbjct: 543 tgaggatgattccagcgaagatgatgaggatgagagtgacgagga---------agatac 593 Query: 750 tcccaagaagccagagactgggaagaagagagcagctgaaagtgcgttgaagacacctgc 809 ||||||||||||||||||||| |||| || || |||||||| || ||||||||||||| | Sbjct: 594 tcccaagaagccagagactggaaagaggaaagtagctgaaattgtgttgaagacaccttc 653 Query: 810 gtctgataagaaggcaaaggttggaacaccatctggccagaagacaggcgccaagaaggg 869 |||||||||||| |||||| ||| ||||| || |||||||||||||| | ||||||||| Sbjct: 654 gtctgataagaaagcaaagattgctacaccgtcaggccagaagacaggtgacaagaaggg 713 Query: 870 tgtccatgtggcaactccacatccggcgaagcaggcgagcaagacccc 917 ||||||||| ||||||||||||||||| |||||||| ||||||||||| Sbjct: 714 tgtccatgtagcaactccacatccggcaaagcaggctagcaagacccc 761 >gb|AC137000.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035I01, complete sequence Length = 147813 Score = 224 bits (113), Expect = 7e-55 Identities = 194/221 (87%) Strand = Plus / Minus Query: 209 aggctgcacttggggaatcaaagaaagcaagtgacagcacgttgatgtatgttaaagttg 268 ||||||| ||||||||||||||||||| | ||||| | | |||||||||||| || Sbjct: 19478 aggctgctcttggggaatcaaagaaaggatctgacaatgcagtaatgtatgttaaaactg 19419 Query: 269 atgatcagaagctagccattggaaccctctcagctgagaggttccctcaaatccaatttg 328 ||||||| ||||||| ||||||||||||||||||||| | ||||||||||||||| |||| Sbjct: 19418 atgatcaaaagctagtcattggaaccctctcagctgacaagttccctcaaatccagtttg 19359 Query: 329 atttggtcttcgataaagagtttgaactatcacacacttcaaagactgccagtgtgttct 388 |||||||||| || ||||||||||| || |||||||||||||||||||| |||||||||| Sbjct: 19358 atttggtctttgacaaagagtttgagctgtcacacacttcaaagactgctagtgtgttct 19299 Query: 389 tttctggttacaaggtttaccagccagctgagggagatgaa 429 ||||||| ||||| |||| |||||| ||||||| ||||||| Sbjct: 19298 tttctggctacaaagtttcccagccggctgaggaagatgaa 19258 Score = 105 bits (53), Expect = 4e-19 Identities = 68/73 (93%) Strand = Plus / Minus Query: 139 ggtctcgaagtcaagcctggacagactgttaagtgtgagcctgaagatgaccactttttg 198 ||||| ||||||||||||||||||||||| || ||||||||||||||||| | ||||||| Sbjct: 19648 ggtcttgaagtcaagcctggacagactgtcaaatgtgagcctgaagatgaacgctttttg 19589 Query: 199 cacctttctcagg 211 ||||||||||||| Sbjct: 19588 cacctttctcagg 19576 Score = 95.6 bits (48), Expect = 4e-16 Identities = 87/100 (87%) Strand = Plus / Minus Query: 758 agccagagactgggaagaagagagcagctgaaagtgcgttgaagacacctgcgtctgata 817 ||||||||||||| |||| || || |||||||| || ||||||||||||| ||||||||| Sbjct: 18457 agccagagactggaaagaggaaagtagctgaaattgtgttgaagacaccttcgtctgata 18398 Query: 818 agaaggcaaaggttggaacaccatctggccagaagacagg 857 |||| |||||| ||| ||||| || |||||||||||||| Sbjct: 18397 agaaagcaaagattgctacaccgtcaggccagaagacagg 18358 Score = 89.7 bits (45), Expect = 3e-14 Identities = 54/57 (94%) Strand = Plus / Minus Query: 861 caagaagggtgtccatgtggcaactccacatccggcgaagcaggcgagcaagacccc 917 |||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||| Sbjct: 18268 caagaagggtgtccatgtagcaactccacatccggcaaagcaggctagcaagacccc 18212