BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst014d20 (881 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001051111.1| Oryza sativa (japonica cultivar-group) Os01g... 212 2e-51 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 212 2e-51 dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic D... 212 2e-51 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 202 2e-48 gb|AC105258.2| Oryza sativa (japonica cultivar-group) chromosome... 202 2e-48 >ref|NM_001051111.1| Oryza sativa (japonica cultivar-group) Os01g0808900 (Os01g0808900) mRNA, complete cds Length = 555 Score = 212 bits (107), Expect = 2e-51 Identities = 119/123 (96%) Strand = Plus / Plus Query: 313 aagaagccgatcaaggtggtgtacatctccaaccccatgcgggtcaagaccagcgccgcg 372 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106 aagaagccgatcaaggtggtgtacatctccaaccccatgcgggtcaagaccagcgccgcc 165 Query: 373 ggcttccgcgccctcgtgcaggagctcaccggccgccacgccgacccctccaagtacagc 432 || ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 166 gggttccgcgccctcgtgcaggagctcaccggccgcaacgccgacccttccaagtacagc 225 Query: 433 ccc 435 ||| Sbjct: 226 ccc 228 Score = 133 bits (67), Expect = 1e-27 Identities = 88/95 (92%) Strand = Plus / Plus Query: 604 gacgaggaggacgacatcttcaggtcacagctgctggacaacaactactcggtgttctcg 663 ||||| || ||||||||||||||||| ||||||||||||| || |||||||||||||||| Sbjct: 454 gacgacgacgacgacatcttcaggtcgcagctgctggacaccagctactcggtgttctcg 513 Query: 664 ccgtcgacgctgctctacgaccacccggacagcaa 698 ||| ||||||||||||||||||||||| ||||||| Sbjct: 514 ccgccgacgctgctctacgaccacccgcacagcaa 548 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 212 bits (107), Expect = 2e-51 Identities = 119/123 (96%) Strand = Plus / Plus Query: 313 aagaagccgatcaaggtggtgtacatctccaaccccatgcgggtcaagaccagcgccgcg 372 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34350260 aagaagccgatcaaggtggtgtacatctccaaccccatgcgggtcaagaccagcgccgcc 34350319 Query: 373 ggcttccgcgccctcgtgcaggagctcaccggccgccacgccgacccctccaagtacagc 432 || ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 34350320 gggttccgcgccctcgtgcaggagctcaccggccgcaacgccgacccttccaagtacagc 34350379 Query: 433 ccc 435 ||| Sbjct: 34350380 ccc 34350382 Score = 133 bits (67), Expect = 1e-27 Identities = 88/95 (92%) Strand = Plus / Plus Query: 604 gacgaggaggacgacatcttcaggtcacagctgctggacaacaactactcggtgttctcg 663 ||||| || ||||||||||||||||| ||||||||||||| || |||||||||||||||| Sbjct: 34350608 gacgacgacgacgacatcttcaggtcgcagctgctggacaccagctactcggtgttctcg 34350667 Query: 664 ccgtcgacgctgctctacgaccacccggacagcaa 698 ||| ||||||||||||||||||||||| ||||||| Sbjct: 34350668 ccgccgacgctgctctacgaccacccgcacagcaa 34350702 >dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0468B07 Length = 169071 Score = 212 bits (107), Expect = 2e-51 Identities = 119/123 (96%) Strand = Plus / Plus Query: 313 aagaagccgatcaaggtggtgtacatctccaaccccatgcgggtcaagaccagcgccgcg 372 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32604 aagaagccgatcaaggtggtgtacatctccaaccccatgcgggtcaagaccagcgccgcc 32663 Query: 373 ggcttccgcgccctcgtgcaggagctcaccggccgccacgccgacccctccaagtacagc 432 || ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 32664 gggttccgcgccctcgtgcaggagctcaccggccgcaacgccgacccttccaagtacagc 32723 Query: 433 ccc 435 ||| Sbjct: 32724 ccc 32726 Score = 133 bits (67), Expect = 1e-27 Identities = 88/95 (92%) Strand = Plus / Plus Query: 604 gacgaggaggacgacatcttcaggtcacagctgctggacaacaactactcggtgttctcg 663 ||||| || ||||||||||||||||| ||||||||||||| || |||||||||||||||| Sbjct: 32952 gacgacgacgacgacatcttcaggtcgcagctgctggacaccagctactcggtgttctcg 33011 Query: 664 ccgtcgacgctgctctacgaccacccggacagcaa 698 ||| ||||||||||||||||||||||| ||||||| Sbjct: 33012 ccgccgacgctgctctacgaccacccgcacagcaa 33046 >dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 202 bits (102), Expect = 2e-48 Identities = 132/141 (93%), Gaps = 2/141 (1%) Strand = Plus / Minus Query: 295 ggcggcggcgccgggggcaagaagccgatcaaggtggtgtacatctccaaccccatgcgg 354 |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 18815047 ggcggcggcggcgggg--aagaagccgatcaaggtggtgtacatctccaaccccatgcgg 18814990 Query: 355 gtcaagaccagcgccgcgggcttccgcgccctcgtgcaggagctcaccggccgccacgcc 414 || | |||||||||||| || ||||||||||||||||||||||||||||||||| ||||| Sbjct: 18814989 gtgaggaccagcgccgccgggttccgcgccctcgtgcaggagctcaccggccgcaacgcc 18814930 Query: 415 gacccctccaagtacagcccc 435 ||||| ||||||||||||||| Sbjct: 18814929 gacccttccaagtacagcccc 18814909 Score = 129 bits (65), Expect = 2e-26 Identities = 98/109 (89%) Strand = Plus / Minus Query: 321 gatcaaggtggtgtacatctccaaccccatgcgggtcaagaccagcgccgcgggcttccg 380 ||||||||||||||||||| ||||||| |||||||| | ||||||| | ||||||||| Sbjct: 24026568 gatcaaggtggtgtacatcgccaacccgatgcgggtgaccaccagcgaggagggcttccg 24026509 Query: 381 cgccctcgtgcaggagctcaccggccgccacgccgacccctccaagtac 429 ||| ||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 24026508 cgcgctcgtgcaggagctcaccggccggcacgccgacccgtccaagtac 24026460 Score = 105 bits (53), Expect = 3e-19 Identities = 74/81 (91%) Strand = Plus / Minus Query: 604 gacgaggaggacgacatcttcaggtcacagctgctggacaacaactactcggtgttctcg 663 ||||| || |||||| |||||||||| ||||||||||||| || |||||||||||||||| Sbjct: 18814746 gacgacgacgacgacgtcttcaggtcgcagctgctggacaccagctactcggtgttctcg 18814687 Query: 664 ccgtcgacgctgctctacgac 684 ||| ||||||||||||||||| Sbjct: 18814686 ccgccgacgctgctctacgac 18814666 Score = 81.8 bits (41), Expect = 4e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 616 gacatcttcaggtcacagctgctggacaacaactactcggtgttctcgccgtcgacgctg 675 ||||||||||||| ||||||||||||| || ||||||||||||||||||| |||| ||| Sbjct: 18818187 gacatcttcaggtggcagctgctggacaccagctactcggtgttctcgccgccgacactg 18818128 Query: 676 ctctacgac 684 ||| ||||| Sbjct: 18818127 ctcgacgac 18818119 >gb|AC105258.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1057_G07, complete sequence Length = 71145 Score = 202 bits (102), Expect = 2e-48 Identities = 132/141 (93%), Gaps = 2/141 (1%) Strand = Plus / Minus Query: 295 ggcggcggcgccgggggcaagaagccgatcaaggtggtgtacatctccaaccccatgcgg 354 |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 37413 ggcggcggcggcgggg--aagaagccgatcaaggtggtgtacatctccaaccccatgcgg 37356 Query: 355 gtcaagaccagcgccgcgggcttccgcgccctcgtgcaggagctcaccggccgccacgcc 414 || | |||||||||||| || ||||||||||||||||||||||||||||||||| ||||| Sbjct: 37355 gtgaggaccagcgccgccgggttccgcgccctcgtgcaggagctcaccggccgcaacgcc 37296 Query: 415 gacccctccaagtacagcccc 435 ||||| ||||||||||||||| Sbjct: 37295 gacccttccaagtacagcccc 37275 Score = 105 bits (53), Expect = 3e-19 Identities = 74/81 (91%) Strand = Plus / Minus Query: 604 gacgaggaggacgacatcttcaggtcacagctgctggacaacaactactcggtgttctcg 663 ||||| || |||||| |||||||||| ||||||||||||| || |||||||||||||||| Sbjct: 37112 gacgacgacgacgacgtcttcaggtcgcagctgctggacaccagctactcggtgttctcg 37053 Query: 664 ccgtcgacgctgctctacgac 684 ||| ||||||||||||||||| Sbjct: 37052 ccgccgacgctgctctacgac 37032 Score = 81.8 bits (41), Expect = 4e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 616 gacatcttcaggtcacagctgctggacaacaactactcggtgttctcgccgtcgacgctg 675 ||||||||||||| ||||||||||||| || ||||||||||||||||||| |||| ||| Sbjct: 40553 gacatcttcaggtggcagctgctggacaccagctactcggtgttctcgccgccgacactg 40494 Query: 676 ctctacgac 684 ||| ||||| Sbjct: 40493 ctcgacgac 40485