BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst013o08 (965 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001050407.1| Oryza sativa (japonica cultivar-group) Os01g... 630 e-177 dbj|AK067914.1| Oryza sativa (japonica cultivar-group) cDNA clon... 630 e-177 gb|DQ244971.1| Zea mays clone 11994 mRNA sequence 444 e-121 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 222 2e-54 dbj|AP003335.4| Oryza sativa (japonica cultivar-group) genomic D... 222 2e-54 >ref|NM_001050407.1| Oryza sativa (japonica cultivar-group) Os01g0680400 (Os01g0680400) mRNA, partial cds Length = 886 Score = 630 bits (318), Expect = e-177 Identities = 390/414 (94%) Strand = Plus / Plus Query: 325 gaggaggaccacatggaggtcgacctcgacaagctgccctccggcagcagcgaccccgtc 384 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 250 gaggaggaccacatggaggtcgacctcgacaagctgccctccggcaccagcgaccccgac 309 Query: 385 aagctcgccaagatgaatgctataatgtcccaatttacagaagaccagatgaaccggtat 444 |||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||| Sbjct: 310 aagctcgccaagatgaatgccatactgtctcaatttacagaagaccagatgaaccggtat 369 Query: 445 gaatcattccggagatctggattccagaaatctaacatgaaaaagctattggcgagcatc 504 || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 370 gagtcattccgcagatctggattccagaaatctaacatgaaaaagctattggcgagcatt 429 Query: 505 actggcagtcaaaagatttctgtgccaacgacaattgtagtatcaggaatagcaaagatg 564 ||||||||||||||||||||| | ||||| |||||||||||||||||||| ||||||||| Sbjct: 430 actggcagtcaaaagatttctctaccaacaacaattgtagtatcaggaattgcaaagatg 489 Query: 565 tttgttggtgagctcattgaaacagctagaatagttatgactgagaggaaggattctgga 624 |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 490 tttgttggtgagcttgttgaaacagctagaatagttatgactgagaggaaagattctgga 549 Query: 625 cccatcagaccttgccacatcagagaagcatacagaagattgaagcttgaagggaagatc 684 || | || |||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 550 ccagtaaggccttgccacatcagagaagcctacagaagattgaaacttgaagggaagatc 609 Query: 685 ccacggcgatctgttcctaggctcttccgttagaattgaagcatctctgttgat 738 |||||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 610 ccacggcggactgttcccaggctcttccgttagaattgaagcatctctgttgat 663 Score = 81.8 bits (41), Expect = 5e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 69 ggccatgaaggaccccttcgaagcggccgtagaggagcaggagtctccgccggactcgcc 128 ||||||||||||||| ||||| ||||| || |||||||||||||| |||||||| ||||| Sbjct: 3 ggccatgaaggacccgttcgaggcggcggtggaggagcaggagtcgccgccggagtcgcc 62 Query: 129 ggcgccgcccgatgaggacgc 149 |||| || ||| |||||||| Sbjct: 63 ggcggcgaacgaggaggacgc 83 >dbj|AK067914.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126J05, full insert sequence Length = 888 Score = 630 bits (318), Expect = e-177 Identities = 390/414 (94%) Strand = Plus / Plus Query: 325 gaggaggaccacatggaggtcgacctcgacaagctgccctccggcagcagcgaccccgtc 384 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 252 gaggaggaccacatggaggtcgacctcgacaagctgccctccggcaccagcgaccccgac 311 Query: 385 aagctcgccaagatgaatgctataatgtcccaatttacagaagaccagatgaaccggtat 444 |||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||| Sbjct: 312 aagctcgccaagatgaatgccatactgtctcaatttacagaagaccagatgaaccggtat 371 Query: 445 gaatcattccggagatctggattccagaaatctaacatgaaaaagctattggcgagcatc 504 || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 gagtcattccgcagatctggattccagaaatctaacatgaaaaagctattggcgagcatt 431 Query: 505 actggcagtcaaaagatttctgtgccaacgacaattgtagtatcaggaatagcaaagatg 564 ||||||||||||||||||||| | ||||| |||||||||||||||||||| ||||||||| Sbjct: 432 actggcagtcaaaagatttctctaccaacaacaattgtagtatcaggaattgcaaagatg 491 Query: 565 tttgttggtgagctcattgaaacagctagaatagttatgactgagaggaaggattctgga 624 |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 492 tttgttggtgagcttgttgaaacagctagaatagttatgactgagaggaaagattctgga 551 Query: 625 cccatcagaccttgccacatcagagaagcatacagaagattgaagcttgaagggaagatc 684 || | || |||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 552 ccagtaaggccttgccacatcagagaagcctacagaagattgaaacttgaagggaagatc 611 Query: 685 ccacggcgatctgttcctaggctcttccgttagaattgaagcatctctgttgat 738 |||||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 612 ccacggcggactgttcccaggctcttccgttagaattgaagcatctctgttgat 665 Score = 81.8 bits (41), Expect = 5e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 69 ggccatgaaggaccccttcgaagcggccgtagaggagcaggagtctccgccggactcgcc 128 ||||||||||||||| ||||| ||||| || |||||||||||||| |||||||| ||||| Sbjct: 5 ggccatgaaggacccgttcgaggcggcggtggaggagcaggagtcgccgccggagtcgcc 64 Query: 129 ggcgccgcccgatgaggacgc 149 |||| || ||| |||||||| Sbjct: 65 ggcggcgaacgaggaggacgc 85 >gb|DQ244971.1| Zea mays clone 11994 mRNA sequence Length = 1013 Score = 444 bits (224), Expect = e-121 Identities = 397/454 (87%), Gaps = 3/454 (0%) Strand = Plus / Plus Query: 269 cggccgcggccagggccaaggggcgggcccacaaggagcag---gacgatgacgaggagg 325 |||||||||||| ||||||||| |||| ||| | ||||||| || |||||||| || | Sbjct: 238 cggccgcggccaaggccaagggccgggtccagagggagcagcaggaggatgacgacgacg 297 Query: 326 aggaggaccacatggaggtcgacctcgacaagctgccctccggcagcagcgaccccgtca 385 | |||||||| |||||||| |||||||||||||| ||| | ||| ||||||| | || Sbjct: 298 acgaggaccagatggaggttgacctcgacaagcttcccagcagcactggcgaccctgaca 357 Query: 386 agctcgccaagatgaatgctataatgtcccaatttacagaagaccagatgaaccggtatg 445 ||||||||||||||||||||||| ||||||| |||||| || | ||||||||||| || | Sbjct: 358 agctcgccaagatgaatgctatactgtcccagtttacacaacagcagatgaaccgttacg 417 Query: 446 aatcattccggagatctggattccagaaatctaacatgaaaaagctattggcgagcatca 505 | |||||||| ||||| ||||| ||||||||||||||||||| ||||||||| ||||||| Sbjct: 418 agtcattccgaagatccggatttcagaaatctaacatgaaaaggctattggcaagcatca 477 Query: 506 ctggcagtcaaaagatttctgtgccaacgacaattgtagtatcaggaatagcaaagatgt 565 |||| ||||||||||||||| | || || ||||||| ||||||||||||||||| || | Sbjct: 478 ctggaagtcaaaagatttctatccctacatcaattgtggtatcaggaatagcaaaaatat 537 Query: 566 ttgttggtgagctcattgaaacagctagaatagttatgactgagaggaaggattctggac 625 ||||||||||||| ||||||||||| ||| |||| |||| ||||||||||||||| |||| Sbjct: 538 ttgttggtgagctaattgaaacagcaagagtagtcatgagtgagaggaaggattcaggac 597 Query: 626 ccatcagaccttgccacatcagagaagcatacagaagattgaagcttgaagggaagatcc 685 ||||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 598 ccatcaggccttgtcacatcagggaggcatacagaagattgaagcttgaagggaagatcc 657 Query: 686 cacggcgatctgttcctaggctcttccgttagaa 719 ||||||| |||||||||||||||||||| ||||| Sbjct: 658 cacggcgctctgttcctaggctcttccgctagaa 691 Score = 103 bits (52), Expect = 1e-18 Identities = 70/76 (92%) Strand = Plus / Plus Query: 71 ccatgaaggaccccttcgaagcggccgtagaggagcaggagtctccgccggactcgccgg 130 ||||||||||||| ||||| |||||||| ||||||||||| || |||||||||||||||| Sbjct: 70 ccatgaaggacccgttcgaggcggccgtcgaggagcaggactcgccgccggactcgccgg 129 Query: 131 cgccgcccgatgagga 146 |||||||||| ||||| Sbjct: 130 cgccgcccgaggagga 145 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 222 bits (112), Expect = 2e-54 Identities = 142/152 (93%) Strand = Plus / Plus Query: 587 cagctagaatagttatgactgagaggaaggattctggacccatcagaccttgccacatca 646 |||||||||||||||||||||||||||| ||||||||||| | || ||||||||||||| Sbjct: 28004634 cagctagaatagttatgactgagaggaaagattctggaccagtaaggccttgccacatca 28004693 Query: 647 gagaagcatacagaagattgaagcttgaagggaagatcccacggcgatctgttcctaggc 706 ||||||| |||||||||||||| ||||||||||||||||||||||| ||||||| |||| Sbjct: 28004694 gagaagcctacagaagattgaaacttgaagggaagatcccacggcggactgttcccaggc 28004753 Query: 707 tcttccgttagaattgaagcatctctgttgat 738 |||||||||||||||||||||||||||||||| Sbjct: 28004754 tcttccgttagaattgaagcatctctgttgat 28004785 Score = 147 bits (74), Expect = 1e-31 Identities = 95/102 (93%) Strand = Plus / Plus Query: 488 agctattggcgagcatcactggcagtcaaaagatttctgtgccaacgacaattgtagtat 547 |||||||||||||||| ||||||||||||||||||||| | ||||| ||||||||||||| Sbjct: 28004294 agctattggcgagcattactggcagtcaaaagatttctctaccaacaacaattgtagtat 28004353 Query: 548 caggaatagcaaagatgtttgttggtgagctcattgaaacag 589 ||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 28004354 caggaattgcaaagatgtttgttggtgagcttgttgaaacag 28004395 Score = 137 bits (69), Expect = 9e-29 Identities = 75/77 (97%) Strand = Plus / Plus Query: 325 gaggaggaccacatggaggtcgacctcgacaagctgccctccggcagcagcgaccccgtc 384 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 28002558 gaggaggaccacatggaggtcgacctcgacaagctgccctccggcaccagcgaccccgac 28002617 Query: 385 aagctcgccaagatgaa 401 ||||||||||||||||| Sbjct: 28002618 aagctcgccaagatgaa 28002634 Score = 135 bits (68), Expect = 4e-28 Identities = 77/80 (96%) Strand = Plus / Plus Query: 410 tgtcccaatttacagaagaccagatgaaccggtatgaatcattccggagatctggattcc 469 |||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 28003271 tgtctcaatttacagaagaccagatgaaccggtatgagtcattccgcagatctggattcc 28003330 Query: 470 agaaatctaacatgaaaaag 489 |||||||||||||||||||| Sbjct: 28003331 agaaatctaacatgaaaaag 28003350 Score = 81.8 bits (41), Expect = 5e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 69 ggccatgaaggaccccttcgaagcggccgtagaggagcaggagtctccgccggactcgcc 128 ||||||||||||||| ||||| ||||| || |||||||||||||| |||||||| ||||| Sbjct: 28002311 ggccatgaaggacccgttcgaggcggcggtggaggagcaggagtcgccgccggagtcgcc 28002370 Query: 129 ggcgccgcccgatgaggacgc 149 |||| || ||| |||||||| Sbjct: 28002371 ggcggcgaacgaggaggacgc 28002391 >dbj|AP003335.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144G04 Length = 194459 Score = 222 bits (112), Expect = 2e-54 Identities = 142/152 (93%) Strand = Plus / Plus Query: 587 cagctagaatagttatgactgagaggaaggattctggacccatcagaccttgccacatca 646 |||||||||||||||||||||||||||| ||||||||||| | || ||||||||||||| Sbjct: 191315 cagctagaatagttatgactgagaggaaagattctggaccagtaaggccttgccacatca 191374 Query: 647 gagaagcatacagaagattgaagcttgaagggaagatcccacggcgatctgttcctaggc 706 ||||||| |||||||||||||| ||||||||||||||||||||||| ||||||| |||| Sbjct: 191375 gagaagcctacagaagattgaaacttgaagggaagatcccacggcggactgttcccaggc 191434 Query: 707 tcttccgttagaattgaagcatctctgttgat 738 |||||||||||||||||||||||||||||||| Sbjct: 191435 tcttccgttagaattgaagcatctctgttgat 191466 Score = 147 bits (74), Expect = 1e-31 Identities = 95/102 (93%) Strand = Plus / Plus Query: 488 agctattggcgagcatcactggcagtcaaaagatttctgtgccaacgacaattgtagtat 547 |||||||||||||||| ||||||||||||||||||||| | ||||| ||||||||||||| Sbjct: 190975 agctattggcgagcattactggcagtcaaaagatttctctaccaacaacaattgtagtat 191034 Query: 548 caggaatagcaaagatgtttgttggtgagctcattgaaacag 589 ||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 191035 caggaattgcaaagatgtttgttggtgagcttgttgaaacag 191076 Score = 137 bits (69), Expect = 9e-29 Identities = 75/77 (97%) Strand = Plus / Plus Query: 325 gaggaggaccacatggaggtcgacctcgacaagctgccctccggcagcagcgaccccgtc 384 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 189239 gaggaggaccacatggaggtcgacctcgacaagctgccctccggcaccagcgaccccgac 189298 Query: 385 aagctcgccaagatgaa 401 ||||||||||||||||| Sbjct: 189299 aagctcgccaagatgaa 189315 Score = 135 bits (68), Expect = 4e-28 Identities = 77/80 (96%) Strand = Plus / Plus Query: 410 tgtcccaatttacagaagaccagatgaaccggtatgaatcattccggagatctggattcc 469 |||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 189952 tgtctcaatttacagaagaccagatgaaccggtatgagtcattccgcagatctggattcc 190011 Query: 470 agaaatctaacatgaaaaag 489 |||||||||||||||||||| Sbjct: 190012 agaaatctaacatgaaaaag 190031 Score = 81.8 bits (41), Expect = 5e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 69 ggccatgaaggaccccttcgaagcggccgtagaggagcaggagtctccgccggactcgcc 128 ||||||||||||||| ||||| ||||| || |||||||||||||| |||||||| ||||| Sbjct: 188992 ggccatgaaggacccgttcgaggcggcggtggaggagcaggagtcgccgccggagtcgcc 189051 Query: 129 ggcgccgcccgatgaggacgc 149 |||| || ||| |||||||| Sbjct: 189052 ggcggcgaacgaggaggacgc 189072