BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst013o04
         (627 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CT836426.1| Oryza sativa (indica cultivar-group) cDNA clone:...   161   4e-36
gb|AC093956.2| Oryza sativa (japonica cultivar-group) chromosome...   153   1e-33
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...   153   1e-33
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...    80   1e-11
dbj|AP003347.3| Oryza sativa (japonica cultivar-group) genomic D...    80   1e-11

>emb|CT836426.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA008M11, full
           insert sequence
          Length = 675

 Score =  161 bits (81), Expect = 4e-36
 Identities = 200/236 (84%), Gaps = 14/236 (5%)
 Strand = Plus / Plus

                                                                       
Query: 87  caaatggagttcagtgctagctctagaagtaatgcctggccaatgtgtggag---ataca 143
           ||||||||| |||||| ||||| |||||||| || |||||||||||||||||   |||||
Sbjct: 96  caaatggagctcagtggtagctgtagaagtactggctggccaatgtgtggaggagataca 155

                                                                       
Query: 144 ggcgaggagcccaaaggaaggccgcacagatagga----gaaagcgtgcgtttggctccc 199
           || ||||||||  |||| | ||| ||||||||||     || || || ||||||||||||
Sbjct: 156 ggtgaggagcctgaagggaagcctcacagataggcttgggagagtgtccgtttggctccc 215

                                                                       
Query: 200 actgccggctag---ctctgtttgctccatgagctgagcatgaggacga---agacgcag 253
           ||||| |||||    ||||| ||||||||||||||||||||||||| ||   ||| ||||
Sbjct: 216 actgctggctaagctctctgcttgctccatgagctgagcatgaggaggaggaagatgcag 275

                                                                   
Query: 254 atggtatgagatttgtggggaattgaggcttcatggtccgagatatatatatctct 309
           ||||| |||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 atggtgtgagctt-gtggggaattgaggcttcatggtccgagatatatatatctct 330


>gb|AC093956.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1263_E10,
             complete sequence
          Length = 116469

 Score =  153 bits (77), Expect = 1e-33
 Identities = 199/236 (84%), Gaps = 14/236 (5%)
 Strand = Plus / Plus

                                                                         
Query: 87    caaatggagttcagtgctagctctagaagtaatgcctggccaatgtgtggag---ataca 143
             ||||||||| |||||| ||||| |||||||| || |||||||||||||||||   |||||
Sbjct: 71374 caaatggagctcagtggtagctgtagaagtattgtctggccaatgtgtggaggagataca 71433

                                                                         
Query: 144   ggcgaggagcccaaaggaaggccgcacagatagga----gaaagcgtgcgtttggctccc 199
             || ||||||||  |||| | ||| ||||||||||     || || || ||||||||||||
Sbjct: 71434 ggtgaggagcctgaagggaagcctcacagataggcttgggagagtgtccgtttggctccc 71493

                                                                         
Query: 200   actgccggctag---ctctgtttgctccatgagctgagcatgaggacga---agacgcag 253
             |||||  ||||    ||||| ||||||||||||||||||||||||| ||   ||| ||||
Sbjct: 71494 actgctagctaagctctctgcttgctccatgagctgagcatgaggaggaggaagatgcag 71553

                                                                     
Query: 254   atggtatgagatttgtggggaattgaggcttcatggtccgagatatatatatctct 309
             ||||| |||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71554 atggtgtgagctt-gtggggaattgaggcttcatggtccgagatatatatatctct 71608


>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score =  153 bits (77), Expect = 1e-33
 Identities = 199/236 (84%), Gaps = 14/236 (5%)
 Strand = Plus / Plus

                                                                            
Query: 87       caaatggagttcagtgctagctctagaagtaatgcctggccaatgtgtggag---ataca 143
                ||||||||| |||||| ||||| |||||||| || |||||||||||||||||   |||||
Sbjct: 27358917 caaatggagctcagtggtagctgtagaagtattgtctggccaatgtgtggaggagataca 27358976

                                                                            
Query: 144      ggcgaggagcccaaaggaaggccgcacagatagga----gaaagcgtgcgtttggctccc 199
                || ||||||||  |||| | ||| ||||||||||     || || || ||||||||||||
Sbjct: 27358977 ggtgaggagcctgaagggaagcctcacagataggcttgggagagtgtccgtttggctccc 27359036

                                                                            
Query: 200      actgccggctag---ctctgtttgctccatgagctgagcatgaggacga---agacgcag 253
                |||||  ||||    ||||| ||||||||||||||||||||||||| ||   ||| ||||
Sbjct: 27359037 actgctagctaagctctctgcttgctccatgagctgagcatgaggaggaggaagatgcag 27359096

                                                                        
Query: 254      atggtatgagatttgtggggaattgaggcttcatggtccgagatatatatatctct 309
                ||||| |||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27359097 atggtgtgagctt-gtggggaattgaggcttcatggtccgagatatatatatctct 27359151


>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 55/59 (93%), Gaps = 2/59 (3%)
 Strand = Plus / Minus

                                                                           
Query: 267      tgtggggaattgaggcttcatggtccgagatatat--atatctctaggtatctcaatta 323
                |||||||||||||||| ||||||||||||||||||  |||||||||||||||| |||||
Sbjct: 28147459 tgtggggaattgaggcgtcatggtccgagatatataaatatctctaggtatcttaatta 28147401


>dbj|AP003347.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0445E10
          Length = 145912

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 55/59 (93%), Gaps = 2/59 (3%)
 Strand = Plus / Minus

                                                                        
Query: 267   tgtggggaattgaggcttcatggtccgagatatat--atatctctaggtatctcaatta 323
             |||||||||||||||| ||||||||||||||||||  |||||||||||||||| |||||
Sbjct: 31453 tgtggggaattgaggcgtcatggtccgagatatataaatatctctaggtatcttaatta 31395