BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst013m05 (1058 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001048972.1| Oryza sativa (japonica cultivar-group) Os01g... 906 0.0 dbj|AK072778.1| Oryza sativa (japonica cultivar-group) cDNA clon... 906 0.0 gb|AY106923.1| Zea mays PCO133385 mRNA sequence 688 0.0 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 238 4e-59 dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic D... 238 4e-59 >ref|NM_001048972.1| Oryza sativa (japonica cultivar-group) Os01g0222500 (Os01g0222500) mRNA, complete cds Length = 1161 Score = 906 bits (457), Expect = 0.0 Identities = 637/697 (91%) Strand = Plus / Plus Query: 61 ccgcgaagatgaacgacggcgatgtggtgcggcagctcaagcagatgacggacttcatcc 120 |||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 116 ccgcgatgatgaacgacggcgatgtggcgcggcagctgaagcagatgacggacttcatcc 175 Query: 121 gccaggaggccgttgagaaggccgccgagatcgaggccgccgctgccgaggaatttcaaa 180 ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 176 gccaggaggccgtcgagaaggccgccgagatcgaggccgccgccgccgaggaatttcaaa 235 Query: 181 ttgagaagctacaactggtggaagctgaaaagaagaagatcaggcaggaatatgaacgga 240 | ||||| ||||| |||||||||||||||||||||| ||||||| ||||| |||||||| Sbjct: 236 tcgagaaactacagctggtggaagctgaaaagaagaggatcaggttggaatttgaacgga 295 Query: 241 aagagaagcaagttggtatcaagaagaaaattgaatactcaatgcagctcaatgcttccc 300 | |||||||||| || |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 296 acgagaagcaaggtgatatcaagaagaaaattgaatactcaaagcagctcaatgcttccc 355 Query: 301 gaattgaagttctgcaagctcaagatgatttagtaaagtcaatgatggaggcagcaggga 360 || |||||||||||||||||||||||||||||| | ||| ||| ||||||||||||||| Sbjct: 356 gacttgaagttctgcaagctcaagatgatttagcgatgtctatgttggaggcagcaggga 415 Query: 361 aagagctactgtacataagccgagaacaccaaacttacaagaaacttctcaggatactta 420 |||||||||||||||||| |||||| ||||| |||||||| ||||| |||||| ||| Sbjct: 416 aagagctactgtacataacccgagatcaccatgtatacaagaatcttcttaggatattta 475 Query: 421 ttgttcagagcttgctgcgtctgaaagagtcggctgtggttctccgctgcaggaaggagg 480 |||||||||||||||||||| |||| ||| | |||||| |||| |||||||||||||||| Sbjct: 476 ttgttcagagcttgctgcgtttgaaggagccagctgtgattctgcgctgcaggaaggagg 535 Query: 481 atcttgagcttgttgaatcagttttggagtcggcaaagaatgaatatgcagaaaaagcga 540 ||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||| | Sbjct: 536 atcgtgagcttgttgaatcagttttggagtctgcaaagaatgaatatgcagacaaagcaa 595 Query: 541 atgtatatcctcttgaaatagtggtagaccgtcatgtctatctgccgtctgctccccgtc 600 || ||||||||| ||||||| ||||||||||| ||||||||||||| |||||||| ||| Sbjct: 596 atatatatcctcctgaaataatggtagaccgtaatgtctatctgcctcctgctcccagtc 655 Query: 601 attatcagccacatggcccctcctgctctggtggagttgtactagcttcccgagatggaa 660 ||||| || ||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 656 attatgaggcacatggaccctcctgctctggtggagttgtgctagcttcccgagatggaa 715 Query: 661 agatcgtctgtgaaaacacgttggatgctagactggaagtggtattcagaaagaagctac 720 |||| ||||||||||| || |||||||||||||| || ||||| |||||||||||||||| Sbjct: 716 agatagtctgtgaaaatacattggatgctagactagaggtggttttcagaaagaagctac 775 Query: 721 cagagatccgtcgaagccttattgggcaggtagctgc 757 ||||||| |||||||||||| |||||||||||||||| Sbjct: 776 cagagattcgtcgaagccttcttgggcaggtagctgc 812 >dbj|AK072778.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139P14, full insert sequence Length = 1162 Score = 906 bits (457), Expect = 0.0 Identities = 637/697 (91%) Strand = Plus / Plus Query: 61 ccgcgaagatgaacgacggcgatgtggtgcggcagctcaagcagatgacggacttcatcc 120 |||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 117 ccgcgatgatgaacgacggcgatgtggcgcggcagctgaagcagatgacggacttcatcc 176 Query: 121 gccaggaggccgttgagaaggccgccgagatcgaggccgccgctgccgaggaatttcaaa 180 ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 177 gccaggaggccgtcgagaaggccgccgagatcgaggccgccgccgccgaggaatttcaaa 236 Query: 181 ttgagaagctacaactggtggaagctgaaaagaagaagatcaggcaggaatatgaacgga 240 | ||||| ||||| |||||||||||||||||||||| ||||||| ||||| |||||||| Sbjct: 237 tcgagaaactacagctggtggaagctgaaaagaagaggatcaggttggaatttgaacgga 296 Query: 241 aagagaagcaagttggtatcaagaagaaaattgaatactcaatgcagctcaatgcttccc 300 | |||||||||| || |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 297 acgagaagcaaggtgatatcaagaagaaaattgaatactcaaagcagctcaatgcttccc 356 Query: 301 gaattgaagttctgcaagctcaagatgatttagtaaagtcaatgatggaggcagcaggga 360 || |||||||||||||||||||||||||||||| | ||| ||| ||||||||||||||| Sbjct: 357 gacttgaagttctgcaagctcaagatgatttagcgatgtctatgttggaggcagcaggga 416 Query: 361 aagagctactgtacataagccgagaacaccaaacttacaagaaacttctcaggatactta 420 |||||||||||||||||| |||||| ||||| |||||||| ||||| |||||| ||| Sbjct: 417 aagagctactgtacataacccgagatcaccatgtatacaagaatcttcttaggatattta 476 Query: 421 ttgttcagagcttgctgcgtctgaaagagtcggctgtggttctccgctgcaggaaggagg 480 |||||||||||||||||||| |||| ||| | |||||| |||| |||||||||||||||| Sbjct: 477 ttgttcagagcttgctgcgtttgaaggagccagctgtgattctgcgctgcaggaaggagg 536 Query: 481 atcttgagcttgttgaatcagttttggagtcggcaaagaatgaatatgcagaaaaagcga 540 ||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||| | Sbjct: 537 atcgtgagcttgttgaatcagttttggagtctgcaaagaatgaatatgcagacaaagcaa 596 Query: 541 atgtatatcctcttgaaatagtggtagaccgtcatgtctatctgccgtctgctccccgtc 600 || ||||||||| ||||||| ||||||||||| ||||||||||||| |||||||| ||| Sbjct: 597 atatatatcctcctgaaataatggtagaccgtaatgtctatctgcctcctgctcccagtc 656 Query: 601 attatcagccacatggcccctcctgctctggtggagttgtactagcttcccgagatggaa 660 ||||| || ||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 657 attatgaggcacatggaccctcctgctctggtggagttgtgctagcttcccgagatggaa 716 Query: 661 agatcgtctgtgaaaacacgttggatgctagactggaagtggtattcagaaagaagctac 720 |||| ||||||||||| || |||||||||||||| || ||||| |||||||||||||||| Sbjct: 717 agatagtctgtgaaaatacattggatgctagactagaggtggttttcagaaagaagctac 776 Query: 721 cagagatccgtcgaagccttattgggcaggtagctgc 757 ||||||| |||||||||||| |||||||||||||||| Sbjct: 777 cagagattcgtcgaagccttcttgggcaggtagctgc 813 >gb|AY106923.1| Zea mays PCO133385 mRNA sequence Length = 1211 Score = 688 bits (347), Expect = 0.0 Identities = 590/671 (87%) Strand = Plus / Plus Query: 89 gcggcagctcaagcagatgacggacttcatccgccaggaggccgttgagaaggccgccga 148 ||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||| Sbjct: 227 gcggcagctgaagcagatgacgaacttcatccgccaggaggccgtcgagaaggccgccga 286 Query: 149 gatcgaggccgccgctgccgaggaatttcaaattgagaagctacaactggtggaagctga 208 ||||||||||||||| |||||||| || ||||| || ||| | || |||||||||||||| Sbjct: 287 gatcgaggccgccgccgccgaggagttccaaatagaaaagttgcagctggtggaagctga 346 Query: 209 aaagaagaagatcaggcaggaatatgaacggaaagagaagcaagttggtatcaagaagaa 268 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 347 aaagaagaagatcaggcaggaatatgaccggaaagagaagcaagttggcatcaagaagaa 406 Query: 269 aattgaatactcaatgcagctcaatgcttcccgaattgaagttctgcaagctcaagatga 328 |||||| ||||| |||||||||||||||||| ||||| |||| || |||||||| ||||| Sbjct: 407 aattgattactcgatgcagctcaatgcttccagaattaaagtccttcaagctcaggatga 466 Query: 329 tttagtaaagtcaatgatggaggcagcagggaaagagctactgtacataagccgagaaca 388 ||| |||| ||| ||||| ||||| ||||||||||||||| |||||| |||| || Sbjct: 467 tttggtaacagatatgttggagtcagcaaggaaagagctactgtgcataagtagagatca 526 Query: 389 ccaaacttacaagaaacttctcaggatacttattgttcagagcttgctgcgtctgaaaga 448 || ||||||||||| || |||| || ||||||||||||||| |||||||| |||||||| Sbjct: 527 ccccacttacaagaagctcctcaagacacttattgttcagagtttgctgcgcctgaaaga 586 Query: 449 gtcggctgtggttctccgctgcaggaaggaggatcttgagcttgttgaatcagttttgga 508 | |||||| |||||||||||||||||||||||||| | |||||||| | ||||||||| Sbjct: 587 accagctgtgcttctccgctgcaggaaggaggatcttcaacttgttgatttagttttgga 646 Query: 509 gtcggcaaagaatgaatatgcagaaaaagcgaatgtatatcctcttgaaatagtggtaga 568 || |||| |||||| |||||||| ||||| || |||||||||| ||| ||||||||||| Sbjct: 647 atctgcaaggaatgagtatgcagataaagcaaaagtatatcctcctgagatagtggtaga 706 Query: 569 ccgtcatgtctatctgccgtctgctccccgtcattatcagccacatggcccctcctgctc 628 ||||| |||||||||| ||||||||| ||||||||||| ||| ||||||||| ||||| Sbjct: 707 tcgtcaaatctatctgccatctgctcccagtcattatcaggcacctggcccctcatgctc 766 Query: 629 tggtggagttgtactagcttcccgagatggaaagatcgtctgtgaaaacacgttggatgc 688 ||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 767 cggtggagttgtgctagcttcccgagatggaaagattgtctgtgaaaacacactggatgc 826 Query: 689 tagactggaagtggtattcagaaagaagctaccagagatccgtcgaagccttattgggca 748 |||| || |||| || |||||||||||||| |||||||| |||| |||||| | ||||| Sbjct: 827 tagattgcaagtagttttcagaaagaagctgccagagattcgtcagagccttttcgggca 886 Query: 749 ggtagctgcgt 759 ||||||||||| Sbjct: 887 ggtagctgcgt 897 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 238 bits (120), Expect = 4e-59 Identities = 180/200 (90%) Strand = Plus / Minus Query: 426 cagagcttgctgcgtctgaaagagtcggctgtggttctccgctgcaggaaggaggatctt 485 ||||||||||||||| |||| ||| | |||||| |||| ||||||||||||||||||| | Sbjct: 6700251 cagagcttgctgcgtttgaaggagccagctgtgattctgcgctgcaggaaggaggatcgt 6700192 Query: 486 gagcttgttgaatcagttttggagtcggcaaagaatgaatatgcagaaaaagcgaatgta 545 |||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||| || Sbjct: 6700191 gagcttgttgaatcagttttggagtctgcaaagaatgaatatgcagacaaagcaaatata 6700132 Query: 546 tatcctcttgaaatagtggtagaccgtcatgtctatctgccgtctgctccccgtcattat 605 ||||||| ||||||| ||||||||||| ||||||||||||| |||||||| |||||||| Sbjct: 6700131 tatcctcctgaaataatggtagaccgtaatgtctatctgcctcctgctcccagtcattat 6700072 Query: 606 cagccacatggcccctcctg 625 || ||||||| |||||||| Sbjct: 6700071 gaggcacatggaccctcctg 6700052 Score = 184 bits (93), Expect = 5e-43 Identities = 141/157 (89%) Strand = Plus / Minus Query: 272 tgaatactcaatgcagctcaatgcttcccgaattgaagttctgcaagctcaagatgattt 331 ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 6701188 tgaatactcaaagcagctcaatgcttcccgacttgaagttctgcaagctcaagatgattt 6701129 Query: 332 agtaaagtcaatgatggaggcagcagggaaagagctactgtacataagccgagaacacca 391 || | ||| ||| ||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 6701128 agcgatgtctatgttggaggcagcagggaaagagctactgtacataacccgagatcacca 6701069 Query: 392 aacttacaagaaacttctcaggatacttattgttcag 428 |||||||| ||||| |||||| ||||||||||| Sbjct: 6701068 tgtatacaagaatcttcttaggatatttattgttcag 6701032 Score = 180 bits (91), Expect = 8e-42 Identities = 106/111 (95%) Strand = Plus / Minus Query: 61 ccgcgaagatgaacgacggcgatgtggtgcggcagctcaagcagatgacggacttcatcc 120 |||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 6702256 ccgcgatgatgaacgacggcgatgtggcgcggcagctgaagcagatgacggacttcatcc 6702197 Query: 121 gccaggaggccgttgagaaggccgccgagatcgaggccgccgctgccgagg 171 ||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 6702196 gccaggaggccgtcgagaaggccgccgagatcgaggccgccgccgccgagg 6702146 Score = 145 bits (73), Expect = 4e-31 Identities = 94/101 (93%) Strand = Plus / Minus Query: 625 gctctggtggagttgtactagcttcccgagatggaaagatcgtctgtgaaaacacgttgg 684 |||||||||||||||| ||||||||||||||||||||||| ||||||||||| || |||| Sbjct: 6699319 gctctggtggagttgtgctagcttcccgagatggaaagatagtctgtgaaaatacattgg 6699260 Query: 685 atgctagactggaagtggtattcagaaagaagctaccagag 725 |||||||||| || ||||| ||||||||||||||||||||| Sbjct: 6699259 atgctagactagaggtggttttcagaaagaagctaccagag 6699219 Score = 125 bits (63), Expect = 4e-25 Identities = 93/103 (90%) Strand = Plus / Minus Query: 169 aggaatttcaaattgagaagctacaactggtggaagctgaaaagaagaagatcaggcagg 228 ||||||||||||| ||||| ||||| |||||||||||||||||||||| ||||||| || Sbjct: 6701524 aggaatttcaaatcgagaaactacagctggtggaagctgaaaagaagaggatcaggttgg 6701465 Query: 229 aatatgaacggaaagagaagcaagttggtatcaagaagaaaat 271 ||| ||||||||| |||||||||| || ||||||||||||||| Sbjct: 6701464 aatttgaacggaacgagaagcaaggtgatatcaagaagaaaat 6701422 Score = 99.6 bits (50), Expect = 2e-17 Identities = 68/74 (91%) Strand = Plus / Plus Query: 180 attgagaagctacaactggtggaagctgaaaagaagaagatcaggcaggaatatgaacgg 239 ||||||||||| ||||| || |||||||| || |||||||||||||| |||||||||||| Sbjct: 26807139 attgagaagcttcaacttgttgaagctgagaaaaagaagatcaggcaagaatatgaacgg 26807198 Query: 240 aaagagaagcaagt 253 |||||||||||||| Sbjct: 26807199 aaagagaagcaagt 26807212 >dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E05 Length = 176935 Score = 238 bits (120), Expect = 4e-59 Identities = 180/200 (90%) Strand = Plus / Minus Query: 426 cagagcttgctgcgtctgaaagagtcggctgtggttctccgctgcaggaaggaggatctt 485 ||||||||||||||| |||| ||| | |||||| |||| ||||||||||||||||||| | Sbjct: 52403 cagagcttgctgcgtttgaaggagccagctgtgattctgcgctgcaggaaggaggatcgt 52344 Query: 486 gagcttgttgaatcagttttggagtcggcaaagaatgaatatgcagaaaaagcgaatgta 545 |||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||| || Sbjct: 52343 gagcttgttgaatcagttttggagtctgcaaagaatgaatatgcagacaaagcaaatata 52284 Query: 546 tatcctcttgaaatagtggtagaccgtcatgtctatctgccgtctgctccccgtcattat 605 ||||||| ||||||| ||||||||||| ||||||||||||| |||||||| |||||||| Sbjct: 52283 tatcctcctgaaataatggtagaccgtaatgtctatctgcctcctgctcccagtcattat 52224 Query: 606 cagccacatggcccctcctg 625 || ||||||| |||||||| Sbjct: 52223 gaggcacatggaccctcctg 52204 Score = 184 bits (93), Expect = 5e-43 Identities = 141/157 (89%) Strand = Plus / Minus Query: 272 tgaatactcaatgcagctcaatgcttcccgaattgaagttctgcaagctcaagatgattt 331 ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 53340 tgaatactcaaagcagctcaatgcttcccgacttgaagttctgcaagctcaagatgattt 53281 Query: 332 agtaaagtcaatgatggaggcagcagggaaagagctactgtacataagccgagaacacca 391 || | ||| ||| ||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 53280 agcgatgtctatgttggaggcagcagggaaagagctactgtacataacccgagatcacca 53221 Query: 392 aacttacaagaaacttctcaggatacttattgttcag 428 |||||||| ||||| |||||| ||||||||||| Sbjct: 53220 tgtatacaagaatcttcttaggatatttattgttcag 53184 Score = 180 bits (91), Expect = 8e-42 Identities = 106/111 (95%) Strand = Plus / Minus Query: 61 ccgcgaagatgaacgacggcgatgtggtgcggcagctcaagcagatgacggacttcatcc 120 |||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 54408 ccgcgatgatgaacgacggcgatgtggcgcggcagctgaagcagatgacggacttcatcc 54349 Query: 121 gccaggaggccgttgagaaggccgccgagatcgaggccgccgctgccgagg 171 ||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 54348 gccaggaggccgtcgagaaggccgccgagatcgaggccgccgccgccgagg 54298 Score = 145 bits (73), Expect = 4e-31 Identities = 94/101 (93%) Strand = Plus / Minus Query: 625 gctctggtggagttgtactagcttcccgagatggaaagatcgtctgtgaaaacacgttgg 684 |||||||||||||||| ||||||||||||||||||||||| ||||||||||| || |||| Sbjct: 51471 gctctggtggagttgtgctagcttcccgagatggaaagatagtctgtgaaaatacattgg 51412 Query: 685 atgctagactggaagtggtattcagaaagaagctaccagag 725 |||||||||| || ||||| ||||||||||||||||||||| Sbjct: 51411 atgctagactagaggtggttttcagaaagaagctaccagag 51371 Score = 125 bits (63), Expect = 4e-25 Identities = 93/103 (90%) Strand = Plus / Minus Query: 169 aggaatttcaaattgagaagctacaactggtggaagctgaaaagaagaagatcaggcagg 228 ||||||||||||| ||||| ||||| |||||||||||||||||||||| ||||||| || Sbjct: 53676 aggaatttcaaatcgagaaactacagctggtggaagctgaaaagaagaggatcaggttgg 53617 Query: 229 aatatgaacggaaagagaagcaagttggtatcaagaagaaaat 271 ||| ||||||||| |||||||||| || ||||||||||||||| Sbjct: 53616 aatttgaacggaacgagaagcaaggtgatatcaagaagaaaat 53574