BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst013j05 (867 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AK242198.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 599 e-168 gb|BT019071.1| Zea mays clone Contig637.F mRNA sequence 410 e-111 gb|AY112385.1| Zea mays CL7234_1 mRNA sequence 329 1e-86 ref|NM_001055787.1| Oryza sativa (japonica cultivar-group) Os03g... 319 1e-83 gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome... 254 5e-64 >dbj|AK242198.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J075166C21, full insert sequence Length = 920 Score = 599 bits (302), Expect = e-168 Identities = 509/575 (88%), Gaps = 6/575 (1%) Strand = Plus / Plus Query: 104 cgacggaggcgcgcccccgccgcccctagccgccgcccccgtcgtctgcctcctccggtc 163 |||||| |||||| | ||||| ||||| |||||||| |||| ||| ||| || |||| || Sbjct: 94 cgacgggggcgcgtctccgcctcccctcgccgccgcgcccgccgtatgcttcatccgctc 153 Query: 164 cgccggagacttcgccggcggcgccttcgtcggatctatcgtcggatatggacaaggttt 223 |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 154 cgccggagacttcgccggtggcgccttcatcggatctatcgtcggatatggacaaggttt 213 Query: 224 gatcactaagaagggcttcaagggctcattcagcaattcagggtcttctgccaagacttt 283 | ||||||||||||| || |||||||||||||||| |||||||||||||||||||||| Sbjct: 214 gttcactaagaagggatttaagggctcattcagcaccgcagggtcttctgccaagacttt 273 Query: 284 tgcagttctctctggcgtccagagtttggtcgtgtgcttattgagaaggctgcgtgggaa 343 ||||||||||||||||||||||||| |||| |||||||| |||||||||||||| || || Sbjct: 274 tgcagttctctctggcgtccagagtctggttgtgtgcttgttgagaaggctgcgcggcaa 333 Query: 344 agatgatattgtcaattctggcattgctggttgctgcactggccttgcgttgagctttcc 403 |||||| ||||| ||| |||| || |||||||| |||||||||||||| ||||||||||| Sbjct: 334 agatgacattgttaatgctgggatagctggttgttgcactggccttgctttgagctttcc 393 Query: 404 aggagcacctcaagcattgcttcagagctgcgccacctttgcagcattctcttgcatcat 463 |||| |||| ||||| ||||| || ||||| || ||||||||||||||||| |||||||| Sbjct: 394 aggaacaccacaagccttgctccaaagctgtgcaacctttgcagcattctcatgcatcat 453 Query: 464 ggaggggctcaacaagcagcaggctgcaatggcacacacacttggtgggaacgctttgac 523 ||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 454 ggaggggctcaacaaacagcaggctgcaatggcacagacacttggtgggagtgctttgac 513 Query: 524 cgtt---gggcagaaaggtggcgttcttcccccgttcacacttccaccacttcttgatgc 580 |||| ||||| ||||||||||| || || ||||| || ||||||||||||||||| Sbjct: 514 cgtttcacaccagaatggtggcgttctcccaccattcactctgccaccacttcttgatgc 573 Query: 581 atcggatgctttagcttcgtgctgccaatccatagtactaaagcctaagcactaga--ct 638 ||| ||||||||| |||| |||||||| || ||||||||||||| |||||||||| || Sbjct: 574 atcagatgctttatcttcatgctgccagcccttagtactaaagccgaagcactagactct 633 Query: 639 acagcatagggagaa-gagatgctcaagaaagcta 672 |||||||||||||| ||||||||||||||||||| Sbjct: 634 tcagcatagggagaaggagatgctcaagaaagcta 668 >gb|BT019071.1| Zea mays clone Contig637.F mRNA sequence Length = 951 Score = 410 bits (207), Expect = e-111 Identities = 354/403 (87%) Strand = Plus / Minus Query: 111 ggcgcgcccccgccgcccctagccgccgcccccgtcgtctgcctcctccggtccgccgga 170 |||||| | ||||||||||||||||||||||| ||||| ||||||||||| |||||||| Sbjct: 818 ggcgcgactccgccgcccctagccgccgcccctgtcgtatgcctcctccgctccgccggg 759 Query: 171 gacttcgccggcggcgccttcgtcggatctatcgtcggatatggacaaggtttgatcact 230 ||||||| |||||||||||||| ||||| ||| |||||||||||||||| |||||||| Sbjct: 758 gacttcggtggcggcgccttcgttggatccatcttcggatatggacaaggcttgatcacc 699 Query: 231 aagaagggcttcaagggctcattcagcaattcagggtcttctgccaagacttttgcagtt 290 |||||||| || |||||||||||||||||| ||||||| |||||||||||||||||| || Sbjct: 698 aagaagggttttaagggctcattcagcaatgcagggtcctctgccaagacttttgcaatt 639 Query: 291 ctctctggcgtccagagtttggtcgtgtgcttattgagaaggctgcgtgggaaagatgat 350 ||||||||||| ||||||||||| ||||||| ||| ||||||| ||||| || ||||| Sbjct: 638 ctctctggcgttcagagtttggttttgtgcttgttgcgaaggctacgtggcaaggatgac 579 Query: 351 attgtcaattctggcattgctggttgctgcactggccttgcgttgagctttccaggagca 410 ||||||||| |||| || |||||||| || |||||||| || ||| |||||||||| || Sbjct: 578 attgtcaatgctggtatagctggttgttgtactggcctcgctttgggctttccaggggcg 519 Query: 411 cctcaagcattgcttcagagctgcgccacctttgcagcattctcttgcatcatggagggg 470 || || |||||||| || ||||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 518 ccacaggcattgctccaaagctgtgccaccttcgcagcattctcatgcatcatggagggg 459 Query: 471 ctcaacaagcagcaggctgcaatggcacacacacttggtggga 513 ||||| |||||||||||||||||||| | ||| ||||| |||| Sbjct: 458 ctcaataagcagcaggctgcaatggctcgcacgcttggaggga 416 Score = 87.7 bits (44), Expect = 7e-14 Identities = 94/110 (85%), Gaps = 3/110 (2%) Strand = Plus / Minus Query: 532 agaaaggtggcgttcttcccccgttcacacttccaccacttcttgatgcatcggatgctt 591 ||||| |||| ||||| ||||||||||| |||||||| ||||||||||||| ||||||| Sbjct: 394 agaaatgtggtgttctgcccccgttcacgcttccacctattcttgatgcatctgatgctt 335 Query: 592 tagcttcgtgctgccaatccatagtactaaagcctaagcactagactaca 641 ||||||| |||||| | | ||| ||||||||||||||||||||||| Sbjct: 334 tagcttcatgctgcttagcgttag---taaagcctaagcactagactaca 288 >gb|AY112385.1| Zea mays CL7234_1 mRNA sequence Length = 729 Score = 329 bits (166), Expect = 1e-86 Identities = 292/334 (87%) Strand = Plus / Plus Query: 180 ggcggcgccttcgtcggatctatcgtcggatatggacaaggtttgatcactaagaagggc 239 |||||||||||||| ||||| ||| |||||||||||||||| |||||||| |||||||| Sbjct: 145 ggcggcgccttcgttggatccatcttcggatatggacaaggcttgatcaccaagaagggt 204 Query: 240 ttcaagggctcattcagcaattcagggtcttctgccaagacttttgcagttctctctggc 299 || |||||||||||||||||| ||||| | |||||||||||||||||||||||||||||| Sbjct: 205 tttaagggctcattcagcaatgcaggggcctctgccaagacttttgcagttctctctggc 264 Query: 300 gtccagagtttggtcgtgtgcttattgagaaggctgcgtgggaaagatgatattgtcaat 359 || ||||||||||| || |||| ||| ||||||| ||||| || ||||| ||||||||| Sbjct: 265 gttcagagtttggttttgcgcttgttgcgaaggctacgtggcaaggatgacattgtcaat 324 Query: 360 tctggcattgctggttgctgcactggccttgcgttgagctttccaggagcacctcaagca 419 |||| || |||||||| ||||||||||| || ||| |||||||||| || || || ||| Sbjct: 325 gctggtatagctggttgttgcactggcctcgctttgggctttccaggggcgccacaggca 384 Query: 420 ttgcttcagagctgcgccacctttgcagcattctcttgcatcatggaggggctcaacaag 479 ||||| || ||||| || ||||| ||||||||||| |||||||||||||||||||| ||| Sbjct: 385 ttgctccaaagctgtgctaccttcgcagcattctcgtgcatcatggaggggctcaataag 444 Query: 480 cagcaggctgcaatggcacacacacttggtggga 513 ||||||||||||||||| | ||| ||||| |||| Sbjct: 445 cagcaggctgcaatggctcgcacgcttggaggga 478 >ref|NM_001055787.1| Oryza sativa (japonica cultivar-group) Os03g0194500 (Os03g0194500) mRNA, complete cds Length = 585 Score = 319 bits (161), Expect = 1e-83 Identities = 292/335 (87%), Gaps = 3/335 (0%) Strand = Plus / Plus Query: 304 agagtttggtcgtgtgcttattgagaaggctgcgtgggaaagatgatattgtcaattctg 363 ||||| |||| |||||||| |||||||||||||| || |||||||| ||||| ||| ||| Sbjct: 251 agagtctggttgtgtgcttgttgagaaggctgcgcggcaaagatgacattgttaatgctg 310 Query: 364 gcattgctggttgctgcactggccttgcgttgagctttccaggagcacctcaagcattgc 423 | || |||||||| |||||||||||||| ||||||||||||||| |||| ||||| |||| Sbjct: 311 ggatagctggttgttgcactggccttgctttgagctttccaggaacaccacaagccttgc 370 Query: 424 ttcagagctgcgccacctttgcagcattctcttgcatcatggaggggctcaacaagcagc 483 | || ||||| || ||||||||||||||||| ||||||||||||||||||||||| |||| Sbjct: 371 tccaaagctgtgcaacctttgcagcattctcatgcatcatggaggggctcaacaaacagc 430 Query: 484 aggctgcaatggcacacacacttggtgggaacgctttgaccgtt---gggcagaaaggtg 540 |||||||||||||||| ||||||||||||| |||||||||||| ||||| |||| Sbjct: 431 aggctgcaatggcacagacacttggtgggagtgctttgaccgtttcacaccagaatggtg 490 Query: 541 gcgttcttcccccgttcacacttccaccacttcttgatgcatcggatgctttagcttcgt 600 ||||||| || || ||||| || |||||||||||||||||||| ||||||||| |||| | Sbjct: 491 gcgttctcccaccattcactctgccaccacttcttgatgcatcagatgctttatcttcat 550 Query: 601 gctgccaatccatagtactaaagcctaagcactag 635 ||||||| || ||||||||||||| ||||||||| Sbjct: 551 gctgccagcccttagtactaaagccgaagcactag 585 Score = 198 bits (100), Expect = 3e-47 Identities = 157/176 (89%) Strand = Plus / Plus Query: 104 cgacggaggcgcgcccccgccgcccctagccgccgcccccgtcgtctgcctcctccggtc 163 |||||| |||||| | ||||| ||||| |||||||| |||| ||| ||| || |||| || Sbjct: 78 cgacgggggcgcgtctccgcctcccctcgccgccgcgcccgccgtatgcttcatccgctc 137 Query: 164 cgccggagacttcgccggcggcgccttcgtcggatctatcgtcggatatggacaaggttt 223 |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 138 cgccggagacttcgccggtggcgccttcatcggatctatcgtcggatatggacaaggttt 197 Query: 224 gatcactaagaagggcttcaagggctcattcagcaattcagggtcttctgccaaga 279 | ||||||||||||| || |||||||||||||||| |||||||||||||||||| Sbjct: 198 gttcactaagaagggatttaagggctcattcagcaccgcagggtcttctgccaaga 253 >gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0064E16, complete sequence Length = 159092 Score = 254 bits (128), Expect = 5e-64 Identities = 242/277 (87%), Gaps = 6/277 (2%) Strand = Plus / Minus Query: 402 ccaggagcacctcaagcattgcttcagagctgcgccacctttgcagcattctcttgcatc 461 |||||| |||| ||||| ||||| || ||||| || ||||||||||||||||| |||||| Sbjct: 115436 ccaggaacaccacaagccttgctccaaagctgtgcaacctttgcagcattctcatgcatc 115377 Query: 462 atggaggggctcaacaagcagcaggctgcaatggcacacacacttggtgggaacgctttg 521 ||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||| Sbjct: 115376 atggaggggctcaacaaacagcaggctgcaatggcacagacacttggtgggagtgctttg 115317 Query: 522 accgtt---gggcagaaaggtggcgttcttcccccgttcacacttccaccacttcttgat 578 |||||| ||||| ||||||||||| || || ||||| || ||||||||||||||| Sbjct: 115316 accgtttcacaccagaatggtggcgttctcccaccattcactctgccaccacttcttgat 115257 Query: 579 gcatcggatgctttagcttcgtgctgccaatccatagtactaaagcctaagcactaga-- 636 ||||| ||||||||| |||| |||||||| || ||||||||||||| |||||||||| Sbjct: 115256 gcatcagatgctttatcttcatgctgccagcccttagtactaaagccgaagcactagact 115197 Query: 637 ctacagcatagggagaa-gagatgctcaagaaagcta 672 || |||||||||||||| ||||||||||||||||||| Sbjct: 115196 cttcagcatagggagaaggagatgctcaagaaagcta 115160 Score = 117 bits (59), Expect = 8e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 104 cgacggaggcgcgcccccgccgcccctagccgccgcccccgtcgtctgcctcctccggtc 163 |||||| |||||| | ||||| ||||| |||||||| |||| ||| ||| || |||| || Sbjct: 117485 cgacgggggcgcgtctccgcctcccctcgccgccgcgcccgccgtatgcttcatccgctc 117426 Query: 164 cgccggagacttcgccggcggcgccttcgtcggatctatcgtcggatatgg 214 |||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 117425 cgccggagacttcgccggtggcgccttcatcggatctatcgtcggatatgg 117375 Score = 105 bits (53), Expect = 3e-19 Identities = 68/73 (93%) Strand = Plus / Minus Query: 277 agacttttgcagttctctctggcgtccagagtttggtcgtgtgcttattgagaaggctgc 336 |||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||| Sbjct: 116795 agacttttgcagttctctctggcgtccagagtctggttgtgtgcttgttgagaaggctgc 116736 Query: 337 gtgggaaagatga 349 | || |||||||| Sbjct: 116735 gcggcaaagatga 116723 Score = 83.8 bits (42), Expect = 1e-12 Identities = 60/66 (90%) Strand = Plus / Minus Query: 213 ggacaaggtttgatcactaagaagggcttcaagggctcattcagcaattcagggtcttct 272 |||||||||||| ||||||||||||| || |||||||||||||||| ||||||||||| Sbjct: 116943 ggacaaggtttgttcactaagaagggatttaagggctcattcagcaccgcagggtcttct 116884 Query: 273 gccaag 278 |||||| Sbjct: 116883 gccaag 116878