BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst013i04 (892 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001073415.1| Oryza sativa (japonica cultivar-group) Os12g... 502 e-138 dbj|AK073732.1| Oryza sativa (japonica cultivar-group) cDNA clon... 494 e-136 gb|AY105110.1| Zea mays PCO079612 mRNA sequence 442 e-120 gb|DQ244411.1| Zea mays clone 7242 mRNA sequence 400 e-108 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 228 3e-56 >ref|NM_001073415.1| Oryza sativa (japonica cultivar-group) Os12g0514600 (Os12g0514600) mRNA, complete cds Length = 924 Score = 502 bits (253), Expect = e-138 Identities = 346/377 (91%) Strand = Plus / Plus Query: 230 agggagatgatccgtgggcggtcgccggagccgctggatttcttcatctggactgtcgag 289 |||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 234 agggagatgagccgggggcggtcgccggagccgctggatttcttcatctggacagtcgag 293 Query: 290 gatgttggattgtggcttgaagagataaatcttggtagctacagacaagtgtttgaagaa 349 ||||||||||| ||||||||||||||||| ||||| |||||||| ||||| ||||| ||| Sbjct: 294 gatgttggattatggcttgaagagataaaccttggcagctacaggcaagtttttgaggaa 353 Query: 350 aatggtgtcaatggagagtacctagaaagcttgtcgatgtttactacggagcagattctg 409 || ||||||||||||||||| || |||||| |||||||||||||||| || ||||||||| Sbjct: 354 aacggtgtcaatggagagtatcttgaaagcctgtcgatgtttactacagaacagattctg 413 Query: 410 cggtttatcaggcgatgccatatgaaatggggagactttatcgcattatgcaaagagttg 469 |||||||||||| | |||||||||||||||||||| || || |||| |||||||||||| Sbjct: 414 cggtttatcaggaggtgccatatgaaatggggagatttcattacattgtgcaaagagttg 473 Query: 470 aggcgcattaaagtcgcctgcctgaaaggggagcaagaggtccggaggccatggtgggcg 529 |||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 474 aggcgcatcaaagtggcctgcctgaaaggggagcaagaagtccgcaggccatggtgggcg 533 Query: 530 ccgtcgtgcctgtcggtggtgtttgtgagggcggccaagcggaaccggcagtcccgagtt 589 ||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 534 ccgtcatgcctatcggtggtgttcgtgagggcggccaagcggaaccggcagtcccgagtc 593 Query: 590 gtctccttgaagctgga 606 |||||| |||||||||| Sbjct: 594 gtctccctgaagctgga 610 >dbj|AK073732.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060I15, full insert sequence Length = 925 Score = 494 bits (249), Expect = e-136 Identities = 345/377 (91%) Strand = Plus / Plus Query: 230 agggagatgatccgtgggcggtcgccggagccgctggatttcttcatctggactgtcgag 289 |||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 235 agggagatgagccgggggcggtcgccggagccgctggatttcttcatctggacagtcgag 294 Query: 290 gatgttggattgtggcttgaagagataaatcttggtagctacagacaagtgtttgaagaa 349 |||||||| || ||||||||||||||||| ||||| |||||||| ||||| ||||| ||| Sbjct: 295 gatgttgggttatggcttgaagagataaaccttggcagctacaggcaagtttttgaggaa 354 Query: 350 aatggtgtcaatggagagtacctagaaagcttgtcgatgtttactacggagcagattctg 409 || ||||||||||||||||| || |||||| |||||||||||||||| || ||||||||| Sbjct: 355 aacggtgtcaatggagagtatcttgaaagcctgtcgatgtttactacagaacagattctg 414 Query: 410 cggtttatcaggcgatgccatatgaaatggggagactttatcgcattatgcaaagagttg 469 |||||||||||| | |||||||||||||||||||| || || |||| |||||||||||| Sbjct: 415 cggtttatcaggaggtgccatatgaaatggggagatttcattacattgtgcaaagagttg 474 Query: 470 aggcgcattaaagtcgcctgcctgaaaggggagcaagaggtccggaggccatggtgggcg 529 |||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 475 aggcgcatcaaagtggcctgcctgaaaggggagcaagaagtccgcaggccatggtgggcg 534 Query: 530 ccgtcgtgcctgtcggtggtgtttgtgagggcggccaagcggaaccggcagtcccgagtt 589 ||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 535 ccgtcatgcctatcggtggtgttcgtgagggcggccaagcggaaccggcagtcccgagtc 594 Query: 590 gtctccttgaagctgga 606 |||||| |||||||||| Sbjct: 595 gtctccctgaagctgga 611 >gb|AY105110.1| Zea mays PCO079612 mRNA sequence Length = 1023 Score = 442 bits (223), Expect = e-120 Identities = 343/383 (89%) Strand = Plus / Plus Query: 227 aggagggagatgatccgtgggcggtcgccggagccgctggatttcttcatctggactgtc 286 |||| ||||||| |||||||||||||||||| ||||| ||||||||||| ||||||||| Sbjct: 318 aggaaggagatgggccgtgggcggtcgccggaaccgctcgatttcttcatatggactgtc 377 Query: 287 gaggatgttggattgtggcttgaagagataaatcttggtagctacagacaagtgtttgaa 346 |||||||||||||| ||||| ||||| || || |||||| ||||||||||||| |||||| Sbjct: 378 gaggatgttggattatggctggaagaaattaaccttggtggctacagacaagtatttgaa 437 Query: 347 gaaaatggtgtcaatggagagtacctagaaagcttgtcgatgtttactacggagcagatt 406 |||||||||||||| ||||| || |||||||||||||| ||||||||||| ||||||||| Sbjct: 438 gaaaatggtgtcaacggagaatatctagaaagcttgtccatgtttactactgagcagatt 497 Query: 407 ctgcggtttatcaggcgatgccatatgaaatggggagactttatcgcattatgcaaagag 466 ||||| ||||| ||||| ||||||||||||||||||||||||||| || | ||||||||| Sbjct: 498 ctgcgttttattaggcggtgccatatgaaatggggagactttatcacactgtgcaaagag 557 Query: 467 ttgaggcgcattaaagtcgcctgcctgaaaggggagcaagaggtccggaggccatggtgg 526 |||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||| Sbjct: 558 ttgaggcgcattaaagtcgcctgcctcaaaggggagcaagaagtccgcaggccatggtgg 617 Query: 527 gcgccgtcgtgcctgtcggtggtgtttgtgagggcggccaagcggaaccggcagtcccga 586 |||||| | ||||| || | ||||| |||||||| ||||||| |||| || ||||||| Sbjct: 618 gcgccggcatgcctctccatagtgttcgtgagggcagccaagcagaacaggaagtcccgt 677 Query: 587 gttgtctccttgaagctggaacc 609 || |||||||||||||||||||| Sbjct: 678 gtcgtctccttgaagctggaacc 700 >gb|DQ244411.1| Zea mays clone 7242 mRNA sequence Length = 787 Score = 400 bits (202), Expect = e-108 Identities = 340/386 (88%) Strand = Plus / Plus Query: 224 gggaggagggagatgatccgtgggcggtcgccggagccgctggatttcttcatctggact 283 ||||||||||||||| ||| | ||| |||||||| ||||| |||| |||||| |||||| Sbjct: 101 gggaggagggagatgggccgggcgcgatcgccggaaccgctcgattacttcatatggact 160 Query: 284 gtcgaggatgttggattgtggcttgaagagataaatcttggtagctacagacaagtgttt 343 ||||||||||||||||| ||||| ||||| |||||||||||| ||||||||||||| ||| Sbjct: 161 gtcgaggatgttggattatggctggaagaaataaatcttggtggctacagacaagtattt 220 Query: 344 gaagaaaatggtgtcaatggagagtacctagaaagcttgtcgatgtttactacggagcag 403 |||||||| ||||||||||||| || |||||||||||||| ||||||||||| |||||| Sbjct: 221 caagaaaatagtgtcaatggagaatatctagaaagcttgtccatgtttactactgagcag 280 Query: 404 attctgcggtttatcaggcgatgccatatgaaatggggagactttatcgcattatgcaaa 463 |||||||| ||||| ||||| ||||||||||||||||||||||||||| || | |||||| Sbjct: 281 attctgcgctttattaggcggtgccatatgaaatggggagactttatcacactgtgcaaa 340 Query: 464 gagttgaggcgcattaaagtcgcctgcctgaaaggggagcaagaggtccggaggccatgg 523 |||||||||||||||||||| || ||||| |||||||||||||| ||||| ||||||||| Sbjct: 341 gagttgaggcgcattaaagtggcgtgccttaaaggggagcaagaagtccgcaggccatgg 400 Query: 524 tgggcgccgtcgtgcctgtcggtggtgtttgtgagggcggccaagcggaaccggcagtcc 583 ||||||||| | ||||| || || || || |||||||| | ||||| |||| || ||||| Sbjct: 401 tgggcgccggcatgcctctccgtagttttcgtgagggcagacaagcagaacaggaagtcc 460 Query: 584 cgagttgtctccttgaagctggaacc 609 || || ||||| |||||||||||||| Sbjct: 461 cgtgtagtctcgttgaagctggaacc 486 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 228 bits (115), Expect = 3e-56 Identities = 175/195 (89%) Strand = Plus / Minus Query: 288 aggatgttggattgtggcttgaagagataaatcttggtagctacagacaagtgtttgaag 347 ||||||||||||| ||||||||||||||||| ||||| |||||||| ||||| ||||| | Sbjct: 19970960 aggatgttggattatggcttgaagagataaaccttggcagctacaggcaagtttttgagg 19970901 Query: 348 aaaatggtgtcaatggagagtacctagaaagcttgtcgatgtttactacggagcagattc 407 |||| ||||||||||||||||| || |||||| |||||||||||||||| || ||||||| Sbjct: 19970900 aaaacggtgtcaatggagagtatcttgaaagcctgtcgatgtttactacagaacagattc 19970841 Query: 408 tgcggtttatcaggcgatgccatatgaaatggggagactttatcgcattatgcaaagagt 467 |||||||||||||| | |||||||||||||||||||| || || |||| |||||||||| Sbjct: 19970840 tgcggtttatcaggaggtgccatatgaaatggggagatttcattacattgtgcaaagagt 19970781 Query: 468 tgaggcgcattaaag 482 |||||||||| |||| Sbjct: 19970780 tgaggcgcatcaaag 19970766 Score = 186 bits (94), Expect = 1e-43 Identities = 115/122 (94%) Strand = Plus / Minus Query: 485 gcctgcctgaaaggggagcaagaggtccggaggccatggtgggcgccgtcgtgcctgtcg 544 ||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||| ||| Sbjct: 19969728 gcctgcctgaaaggggagcaagaagtccgcaggccatggtgggcgccgtcatgcctatcg 19969669 Query: 545 gtggtgtttgtgagggcggccaagcggaaccggcagtcccgagttgtctccttgaagctg 604 |||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 19969668 gtggtgttcgtgagggcggccaagcggaaccggcagtcccgagtcgtctccctgaagctg 19969609 Query: 605 ga 606 || Sbjct: 19969608 ga 19969607 Score = 97.6 bits (49), Expect = 7e-17 Identities = 58/61 (95%) Strand = Plus / Minus Query: 230 agggagatgatccgtgggcggtcgccggagccgctggatttcttcatctggactgtcgag 289 |||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 19973280 agggagatgagccgggggcggtcgccggagccgctggatttcttcatctggacagtcgag 19973221 Query: 290 g 290 | Sbjct: 19973220 g 19973220