BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst013g10 (941 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001050601.1| Oryza sativa (japonica cultivar-group) Os01g... 369 1e-98 dbj|AK063369.1| Oryza sativa (japonica cultivar-group) cDNA clon... 369 1e-98 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 305 2e-79 dbj|AP003408.3| Oryza sativa (japonica cultivar-group) genomic D... 305 2e-79 dbj|AP003288.3| Oryza sativa (japonica cultivar-group) genomic D... 305 2e-79 >ref|NM_001050601.1| Oryza sativa (japonica cultivar-group) Os01g0715800 (Os01g0715800) mRNA, complete cds Length = 1247 Score = 369 bits (186), Expect = 1e-98 Identities = 297/334 (88%) Strand = Plus / Plus Query: 176 ggaagcctggatcagaggcggcggccgcgcctgaggtggaggtgcagctattccgacggg 235 ||||||||||||| |||||||||||| ||| ||||| ||||||||||| ||||| || | Sbjct: 175 ggaagcctggatcggaggcggcggccaagccggaggtcgaggtgcagctgttccggcgtg 234 Query: 236 gttgggggccgggggccgtgttccggtcgtggctgggcgggtggacacaggaccagctgg 295 | ||||||||| |||||||||||||||| ||||||||||| || ||||||||||||| Sbjct: 235 ggcgggggccggtggccgtgttccggtcgccgctgggcgggtacacgcaggaccagctgg 294 Query: 296 acgtgggcgacatcctggagcagcacggcctcaagtccgtcttcgccttcgaccccgcct 355 | ||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 295 aggtgggggacatcctggagcagcacggcctcaagtccgtcttcgtcttccaccccgcct 354 Query: 356 cctgcacccggcgcgtcgccatccgcttccacccccgtaatggccgctccctcctcacct 415 || ||||||| ||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 355 cccgcacccgcggcgtcgccatccgcttccacccccgcaacggccgctccctcctcacct 414 Query: 416 atgccccaggctccaccatctttgtcgacggcgagcccaaggattctttgctgaagccca 475 | | | | || ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 415 acgtcgctggttccaccatcttcctcgacggcgagcccaaggattctttgctgaagcccg 474 Query: 476 tcaccaaggtgatgattggcgtcgccgctatgac 509 |||| |||||||||||||| || || |||||||| Sbjct: 475 tcacgaaggtgatgattggtgtggcagctatgac 508 Score = 133 bits (67), Expect = 1e-27 Identities = 85/91 (93%) Strand = Plus / Plus Query: 544 atgggtgctggcttgcatagtcattgtgttcatgaggctccggaagagaaccaaggatgt 603 |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 593 atgggtactggcttgcatggtcattgtgttcatgaggctccggaagagaaccaaggatgc 652 Query: 604 catgaagaagtttggctgggcctcatgaggt 634 |||||| |||||||||||| | ||||||||| Sbjct: 653 catgaaaaagtttggctggtcttcatgaggt 683 >dbj|AK063369.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-E01, full insert sequence Length = 1248 Score = 369 bits (186), Expect = 1e-98 Identities = 297/334 (88%) Strand = Plus / Plus Query: 176 ggaagcctggatcagaggcggcggccgcgcctgaggtggaggtgcagctattccgacggg 235 ||||||||||||| |||||||||||| ||| ||||| ||||||||||| ||||| || | Sbjct: 175 ggaagcctggatcggaggcggcggccaagccggaggtcgaggtgcagctgttccggcgtg 234 Query: 236 gttgggggccgggggccgtgttccggtcgtggctgggcgggtggacacaggaccagctgg 295 | ||||||||| |||||||||||||||| ||||||||||| || ||||||||||||| Sbjct: 235 ggcgggggccggtggccgtgttccggtcgccgctgggcgggtacacgcaggaccagctgg 294 Query: 296 acgtgggcgacatcctggagcagcacggcctcaagtccgtcttcgccttcgaccccgcct 355 | ||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 295 aggtgggggacatcctggagcagcacggcctcaagtccgtcttcgtcttccaccccgcct 354 Query: 356 cctgcacccggcgcgtcgccatccgcttccacccccgtaatggccgctccctcctcacct 415 || ||||||| ||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 355 cccgcacccgcggcgtcgccatccgcttccacccccgcaacggccgctccctcctcacct 414 Query: 416 atgccccaggctccaccatctttgtcgacggcgagcccaaggattctttgctgaagccca 475 | | | | || ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 415 acgtcgctggttccaccatcttcctcgacggcgagcccaaggattctttgctgaagcccg 474 Query: 476 tcaccaaggtgatgattggcgtcgccgctatgac 509 |||| |||||||||||||| || || |||||||| Sbjct: 475 tcacgaaggtgatgattggtgtggcagctatgac 508 Score = 133 bits (67), Expect = 1e-27 Identities = 85/91 (93%) Strand = Plus / Plus Query: 544 atgggtgctggcttgcatagtcattgtgttcatgaggctccggaagagaaccaaggatgt 603 |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 593 atgggtactggcttgcatggtcattgtgttcatgaggctccggaagagaaccaaggatgc 652 Query: 604 catgaagaagtttggctgggcctcatgaggt 634 |||||| |||||||||||| | ||||||||| Sbjct: 653 catgaaaaagtttggctggtcttcatgaggt 683 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 305 bits (154), Expect = 2e-79 Identities = 250/282 (88%) Strand = Plus / Minus Query: 176 ggaagcctggatcagaggcggcggccgcgcctgaggtggaggtgcagctattccgacggg 235 ||||||||||||| |||||||||||| ||| ||||| ||||||||||| ||||| || | Sbjct: 29779038 ggaagcctggatcggaggcggcggccaagccggaggtcgaggtgcagctgttccggcgtg 29778979 Query: 236 gttgggggccgggggccgtgttccggtcgtggctgggcgggtggacacaggaccagctgg 295 | ||||||||| |||||||||||||||| ||||||||||| || ||||||||||||| Sbjct: 29778978 ggcgggggccggtggccgtgttccggtcgccgctgggcgggtacacgcaggaccagctgg 29778919 Query: 296 acgtgggcgacatcctggagcagcacggcctcaagtccgtcttcgccttcgaccccgcct 355 | ||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 29778918 aggtgggggacatcctggagcagcacggcctcaagtccgtcttcgtcttccaccccgcct 29778859 Query: 356 cctgcacccggcgcgtcgccatccgcttccacccccgtaatggccgctccctcctcacct 415 || ||||||| ||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 29778858 cccgcacccgcggcgtcgccatccgcttccacccccgcaacggccgctccctcctcacct 29778799 Query: 416 atgccccaggctccaccatctttgtcgacggcgagcccaagg 457 | | | | || ||||||||||| |||||||||||||||||| Sbjct: 29778798 acgtcgctggttccaccatcttcctcgacggcgagcccaagg 29778757 Score = 135 bits (68), Expect = 4e-28 Identities = 86/92 (93%) Strand = Plus / Minus Query: 544 atgggtgctggcttgcatagtcattgtgttcatgaggctccggaagagaaccaaggatgt 603 |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 29778510 atgggtactggcttgcatggtcattgtgttcatgaggctccggaagagaaccaaggatgc 29778451 Query: 604 catgaagaagtttggctgggcctcatgaggta 635 |||||| |||||||||||| | |||||||||| Sbjct: 29778450 catgaaaaagtttggctggtcttcatgaggta 29778419 >dbj|AP003408.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1131B07 Length = 109135 Score = 305 bits (154), Expect = 2e-79 Identities = 250/282 (88%) Strand = Plus / Minus Query: 176 ggaagcctggatcagaggcggcggccgcgcctgaggtggaggtgcagctattccgacggg 235 ||||||||||||| |||||||||||| ||| ||||| ||||||||||| ||||| || | Sbjct: 108769 ggaagcctggatcggaggcggcggccaagccggaggtcgaggtgcagctgttccggcgtg 108710 Query: 236 gttgggggccgggggccgtgttccggtcgtggctgggcgggtggacacaggaccagctgg 295 | ||||||||| |||||||||||||||| ||||||||||| || ||||||||||||| Sbjct: 108709 ggcgggggccggtggccgtgttccggtcgccgctgggcgggtacacgcaggaccagctgg 108650 Query: 296 acgtgggcgacatcctggagcagcacggcctcaagtccgtcttcgccttcgaccccgcct 355 | ||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 108649 aggtgggggacatcctggagcagcacggcctcaagtccgtcttcgtcttccaccccgcct 108590 Query: 356 cctgcacccggcgcgtcgccatccgcttccacccccgtaatggccgctccctcctcacct 415 || ||||||| ||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 108589 cccgcacccgcggcgtcgccatccgcttccacccccgcaacggccgctccctcctcacct 108530 Query: 416 atgccccaggctccaccatctttgtcgacggcgagcccaagg 457 | | | | || ||||||||||| |||||||||||||||||| Sbjct: 108529 acgtcgctggttccaccatcttcctcgacggcgagcccaagg 108488 Score = 135 bits (68), Expect = 4e-28 Identities = 86/92 (93%) Strand = Plus / Minus Query: 544 atgggtgctggcttgcatagtcattgtgttcatgaggctccggaagagaaccaaggatgt 603 |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 108241 atgggtactggcttgcatggtcattgtgttcatgaggctccggaagagaaccaaggatgc 108182 Query: 604 catgaagaagtttggctgggcctcatgaggta 635 |||||| |||||||||||| | |||||||||| Sbjct: 108181 catgaaaaagtttggctggtcttcatgaggta 108150 >dbj|AP003288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0683B11 Length = 155955 Score = 305 bits (154), Expect = 2e-79 Identities = 250/282 (88%) Strand = Plus / Minus Query: 176 ggaagcctggatcagaggcggcggccgcgcctgaggtggaggtgcagctattccgacggg 235 ||||||||||||| |||||||||||| ||| ||||| ||||||||||| ||||| || | Sbjct: 23133 ggaagcctggatcggaggcggcggccaagccggaggtcgaggtgcagctgttccggcgtg 23074 Query: 236 gttgggggccgggggccgtgttccggtcgtggctgggcgggtggacacaggaccagctgg 295 | ||||||||| |||||||||||||||| ||||||||||| || ||||||||||||| Sbjct: 23073 ggcgggggccggtggccgtgttccggtcgccgctgggcgggtacacgcaggaccagctgg 23014 Query: 296 acgtgggcgacatcctggagcagcacggcctcaagtccgtcttcgccttcgaccccgcct 355 | ||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 23013 aggtgggggacatcctggagcagcacggcctcaagtccgtcttcgtcttccaccccgcct 22954 Query: 356 cctgcacccggcgcgtcgccatccgcttccacccccgtaatggccgctccctcctcacct 415 || ||||||| ||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 22953 cccgcacccgcggcgtcgccatccgcttccacccccgcaacggccgctccctcctcacct 22894 Query: 416 atgccccaggctccaccatctttgtcgacggcgagcccaagg 457 | | | | || ||||||||||| |||||||||||||||||| Sbjct: 22893 acgtcgctggttccaccatcttcctcgacggcgagcccaagg 22852 Score = 135 bits (68), Expect = 4e-28 Identities = 86/92 (93%) Strand = Plus / Minus Query: 544 atgggtgctggcttgcatagtcattgtgttcatgaggctccggaagagaaccaaggatgt 603 |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 22605 atgggtactggcttgcatggtcattgtgttcatgaggctccggaagagaaccaaggatgc 22546 Query: 604 catgaagaagtttggctgggcctcatgaggta 635 |||||| |||||||||||| | |||||||||| Sbjct: 22545 catgaaaaagtttggctggtcttcatgaggta 22514