BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst013c17
         (508 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|AK241085.1| Oryza sativa (japonica cultivar-group) cDNA, clo...   186   6e-44
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...   153   8e-34
gb|AC091733.3| Genomic sequence for Oryza sativa, Nipponbare str...   153   8e-34
gb|DQ245953.1| Zea mays clone 93208 mRNA sequence                     123   7e-25
gb|AY108415.1| Zea mays PCO116645 mRNA sequence                       107   4e-20

>dbj|AK241085.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065073P03,
           full insert sequence
          Length = 471

 Score =  186 bits (94), Expect = 6e-44
 Identities = 136/150 (90%)
 Strand = Plus / Plus

                                                                       
Query: 105 agttcctctcctggaagcagcgaagggatgcagaggaagctgcaagaaaagctgaagcag 164
           |||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||
Sbjct: 147 agttcctctcctggaagcagcggaaggatgcagaggaagctgcaaggaaagctgaagcag 206

                                                                       
Query: 165 cttagaagcgagcagcagatgtagcttcagcagcagtgcaaatgaatggccgagagctgt 224
           |  |||||||||  |||||| ||||||||| |||||| ||||||||||| ||||||||||
Sbjct: 207 cacagaagcgagaggcagatatagcttcaggagcagtacaaatgaatgggcgagagctgt 266

                                         
Query: 225 tccagcatgaaccatgggtgtttgacaata 254
           || |||||||||| ||||| ||||||||||
Sbjct: 267 tcaagcatgaaccctgggtctttgacaata 296


>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score =  153 bits (77), Expect = 8e-34
 Identities = 113/125 (90%)
 Strand = Plus / Minus

                                                                            
Query: 130      ggatgcagaggaagctgcaagaaaagctgaagcagcttagaagcgagcagcagatgtagc 189
                ||||||||||||||||||||| ||||||||||||||  |||||||||  |||||| ||||
Sbjct: 15128417 ggatgcagaggaagctgcaaggaaagctgaagcagcacagaagcgagaggcagatatagc 15128358

                                                                            
Query: 190      ttcagcagcagtgcaaatgaatggccgagagctgttccagcatgaaccatgggtgtttga 249
                ||||| |||||| ||||||||||| |||||||||||| |||||||||| ||||| |||||
Sbjct: 15128357 ttcaggagcagtacaaatgaatgggcgagagctgttcaagcatgaaccctgggtctttga 15128298

                     
Query: 250      caata 254
                |||||
Sbjct: 15128297 caata 15128293



 Score =  147 bits (74), Expect = 5e-32
 Identities = 113/126 (89%)
 Strand = Plus / Minus

                                                                            
Query: 130      ggatgcagaggaagctgcaagaaaagctgaagcagcttagaagcgagcagcagatgtagc 189
                ||||||||||||||||||||| ||||||||||||||  |||||||||  || |||  |||
Sbjct: 15122522 ggatgcagaggaagctgcaaggaaagctgaagcagcacagaagcgagaggctgatagagc 15122463

                                                                            
Query: 190      ttcagcagcagtgcaaatgaatggccgagagctgttccagcatgaaccatgggtgtttga 249
                ||||| |||||||||||||||||||||| |||||||| |||||||||| ||||| |||||
Sbjct: 15122462 ttcaggagcagtgcaaatgaatggccgatagctgttcaagcatgaaccctgggtctttga 15122403

                      
Query: 250      caataa 255
                ||||||
Sbjct: 15122402 caataa 15122397


>gb|AC091733.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0048F08, from chromosome 3, complete sequence
          Length = 155790

 Score =  153 bits (77), Expect = 8e-34
 Identities = 113/125 (90%)
 Strand = Plus / Plus

                                                                         
Query: 130   ggatgcagaggaagctgcaagaaaagctgaagcagcttagaagcgagcagcagatgtagc 189
             ||||||||||||||||||||| ||||||||||||||  |||||||||  |||||| ||||
Sbjct: 20890 ggatgcagaggaagctgcaaggaaagctgaagcagcacagaagcgagaggcagatatagc 20949

                                                                         
Query: 190   ttcagcagcagtgcaaatgaatggccgagagctgttccagcatgaaccatgggtgtttga 249
             ||||| |||||| ||||||||||| |||||||||||| |||||||||| ||||| |||||
Sbjct: 20950 ttcaggagcagtacaaatgaatgggcgagagctgttcaagcatgaaccctgggtctttga 21009

                  
Query: 250   caata 254
             |||||
Sbjct: 21010 caata 21014



 Score =  147 bits (74), Expect = 5e-32
 Identities = 113/126 (89%)
 Strand = Plus / Plus

                                                                         
Query: 130   ggatgcagaggaagctgcaagaaaagctgaagcagcttagaagcgagcagcagatgtagc 189
             ||||||||||||||||||||| ||||||||||||||  |||||||||  || |||  |||
Sbjct: 26785 ggatgcagaggaagctgcaaggaaagctgaagcagcacagaagcgagaggctgatagagc 26844

                                                                         
Query: 190   ttcagcagcagtgcaaatgaatggccgagagctgttccagcatgaaccatgggtgtttga 249
             ||||| |||||||||||||||||||||| |||||||| |||||||||| ||||| |||||
Sbjct: 26845 ttcaggagcagtgcaaatgaatggccgatagctgttcaagcatgaaccctgggtctttga 26904

                   
Query: 250   caataa 255
             ||||||
Sbjct: 26905 caataa 26910


>gb|DQ245953.1| Zea mays clone 93208 mRNA sequence
          Length = 614

 Score =  123 bits (62), Expect = 7e-25
 Identities = 134/158 (84%)
 Strand = Plus / Plus

                                                                       
Query: 107 ttcctctcctggaagcagcgaagggatgcagaggaagctgcaagaaaagctgaagcagct 166
           |||||||||||||||||||| | ||||||||||| ||| ||||| |||||||||||||||
Sbjct: 142 ttcctctcctggaagcagcgcaaggatgcagaggtagccgcaaggaaagctgaagcagct 201

                                                                       
Query: 167 tagaagcgagcagcagatgtagcttcagcagcagtgcaaatgaatggccgagagctgttc 226
            |||||||||| |  ||| | ||||| | ||| | ||| ||||| ||||| |||||||||
Sbjct: 202 gagaagcgagctgatgatatcgcttcgggagcggcgcagatgaacggccgcgagctgttc 261

                                                 
Query: 227 cagcatgaaccatgggtgtttgacaataacattcactg 264
           || ||||| || |||||||| ||||| |||||| ||||
Sbjct: 262 caacatgagccctgggtgttcgacaacaacatttactg 299


>gb|AY108415.1| Zea mays PCO116645 mRNA sequence
          Length = 533

 Score =  107 bits (54), Expect = 4e-20
 Identities = 136/161 (84%), Gaps = 3/161 (1%)
 Strand = Plus / Plus

                                                                       
Query: 107 ttcctctcctggaagcagcg-aag--ggatgcagaggaagctgcaagaaaagctgaagca 163
           |||||||||||||||||||| |||  ||||||||||| ||| ||||| ||||||||||||
Sbjct: 99  ttcctctcctggaagcagcgcaagtaggatgcagaggtagccgcaaggaaagctgaagca 158

                                                                       
Query: 164 gcttagaagcgagcagcagatgtagcttcagcagcagtgcaaatgaatggccgagagctg 223
           ||| |||||||||| |  ||| | ||||| | ||| | ||| ||||| ||||| ||||||
Sbjct: 159 gctgagaagcgagctgatgatatcgcttcgggagcggcgcagatgaacggccgcgagctg 218

                                                    
Query: 224 ttccagcatgaaccatgggtgtttgacaataacattcactg 264
           ||||| ||||| || |||||||| ||||| |||||| ||||
Sbjct: 219 ttccaacatgagccctgggtgttcgacaacaacatttactg 259