BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst013a23 (901 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001061616.1| Oryza sativa (japonica cultivar-group) Os05g... 545 e-151 dbj|AK105351.1| Oryza sativa (japonica cultivar-group) cDNA clon... 545 e-151 gb|AC145273.2| Oryza sativa (japonica cultivar-group) chromosome... 486 e-134 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 486 e-134 gb|DQ647625.1| Hordeum vulgare subsp. vulgare germin-like protei... 226 1e-55 >ref|NM_001061616.1| Oryza sativa (japonica cultivar-group) Os05g0277500 (Os05g0277500) mRNA, complete cds Length = 840 Score = 545 bits (275), Expect = e-151 Identities = 527/611 (86%) Strand = Plus / Plus Query: 85 ctcctccccccaccgtccatcgccggcgatcccgatttgctccaggacatctgcgtcgcc 144 ||||||||| | ||||||| ||||||||| || || |||||||||||||||||||||| Sbjct: 81 ctcctccccacgccgtccaccgccggcgaccctgacctgctccaggacatctgcgtcgct 140 Query: 145 gatctcacatcagccgtgaaggtgaatgggttcgcttgcaagaccactgtgacggaggat 204 || ||||| |||||||||||||||||||||||||| |||||| | | ||||||||||| Sbjct: 141 gacctcacctcagccgtgaaggtgaatgggttcgcgtgcaaggcggcggtgacggaggac 200 Query: 205 gacttctacttcaaggggctgggcaccgcaggcaacaccaacaacacatacggctccctg 264 |||||||||||||||||||| | | |||| ||||||||||||||||| |||||||| || Sbjct: 201 gacttctacttcaaggggcttgccgccgccggcaacaccaacaacacgtacggctcggtg 260 Query: 265 gtcacgggcgcgaacgtcgagaagttgcctgggctcaacaccctgggcgtgtcaatgtcg 324 || || ||||| ||||| ||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 261 gtgaccggcgccaacgtggagaagttgccggggctcaacaccctgggcgtgtccatgtcc 320 Query: 325 cgcatcgattacgcgccggccggcctcaacccgccgcacacccacccgcgcgccaccgag 384 || ||||| ||||| || | |||||||||||||||||||||||||||||||||||||||| Sbjct: 321 cggatcgactacgcccccggcggcctcaacccgccgcacacccacccgcgcgccaccgag 380 Query: 385 atggtcttcgtcctgcagggcatcctcgatgttggcttcataacaactggaaacaagctc 444 ||||| |||||||||||||||| |||||| || |||||||| || || | |||||||| Sbjct: 381 atggtgttcgtcctgcagggcaccctcgacgtcggcttcatcaccaccgccaacaagctg 440 Query: 445 attgcgaagaccatctcggctggtgatgtcttcgtcttcccccgaggtctggttcacttc 504 | ||||||||||| || || || |||||||||||||| || || ||| | |||||| Sbjct: 441 tacaccaagaccatctctgccggcgacgtcttcgtcttcccgcgcggcctgctccacttc 500 Query: 505 cagaagaacaacggcgacacccccgcctccgtcatctcggccttcaatagccaactgccc 564 ||||||||||||||||||||||||||| |||||||||| |||||||| ||||| |||||| Sbjct: 501 cagaagaacaacggcgacacccccgccgccgtcatctccgccttcaacagccagctgccc 560 Query: 565 ggcacacagtccattgccatgacactcttcttggccacgccggaagtgccaaacaatgtg 624 ||||| |||||| | |||||||| |||||| ||| ||||||| ||||| || ||| Sbjct: 561 ggcacgcagtccctcgccatgacgctcttcgcggcgtcgccggaggtgcccgacggcgtg 620 Query: 625 ctcaccaaggcgttccaggttggcactaaggaggtggagaagatcaagtccaaccttgcc 684 ||||||||||| |||||||||||||| |||||||||||||||||||| |||| ||||| Sbjct: 621 ctcaccaaggccttccaggttggcaccaaggaggtggagaagatcaaatccaggcttgca 680 Query: 685 cccaaaaagag 695 ||||| ||||| Sbjct: 681 cccaagaagag 691 >dbj|AK105351.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-A07, full insert sequence Length = 840 Score = 545 bits (275), Expect = e-151 Identities = 527/611 (86%) Strand = Plus / Plus Query: 85 ctcctccccccaccgtccatcgccggcgatcccgatttgctccaggacatctgcgtcgcc 144 ||||||||| | ||||||| ||||||||| || || |||||||||||||||||||||| Sbjct: 81 ctcctccccacgccgtccaccgccggcgaccctgacctgctccaggacatctgcgtcgct 140 Query: 145 gatctcacatcagccgtgaaggtgaatgggttcgcttgcaagaccactgtgacggaggat 204 || ||||| |||||||||||||||||||||||||| |||||| | | ||||||||||| Sbjct: 141 gacctcacctcagccgtgaaggtgaatgggttcgcgtgcaaggcggcggtgacggaggac 200 Query: 205 gacttctacttcaaggggctgggcaccgcaggcaacaccaacaacacatacggctccctg 264 |||||||||||||||||||| | | |||| ||||||||||||||||| |||||||| || Sbjct: 201 gacttctacttcaaggggcttgccgccgccggcaacaccaacaacacgtacggctcggtg 260 Query: 265 gtcacgggcgcgaacgtcgagaagttgcctgggctcaacaccctgggcgtgtcaatgtcg 324 || || ||||| ||||| ||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 261 gtgaccggcgccaacgtggagaagttgccggggctcaacaccctgggcgtgtccatgtcc 320 Query: 325 cgcatcgattacgcgccggccggcctcaacccgccgcacacccacccgcgcgccaccgag 384 || ||||| ||||| || | |||||||||||||||||||||||||||||||||||||||| Sbjct: 321 cggatcgactacgcccccggcggcctcaacccgccgcacacccacccgcgcgccaccgag 380 Query: 385 atggtcttcgtcctgcagggcatcctcgatgttggcttcataacaactggaaacaagctc 444 ||||| |||||||||||||||| |||||| || |||||||| || || | |||||||| Sbjct: 381 atggtgttcgtcctgcagggcaccctcgacgtcggcttcatcaccaccgccaacaagctg 440 Query: 445 attgcgaagaccatctcggctggtgatgtcttcgtcttcccccgaggtctggttcacttc 504 | ||||||||||| || || || |||||||||||||| || || ||| | |||||| Sbjct: 441 tacaccaagaccatctctgccggcgacgtcttcgtcttcccgcgcggcctgctccacttc 500 Query: 505 cagaagaacaacggcgacacccccgcctccgtcatctcggccttcaatagccaactgccc 564 ||||||||||||||||||||||||||| |||||||||| |||||||| ||||| |||||| Sbjct: 501 cagaagaacaacggcgacacccccgccgccgtcatctccgccttcaacagccagctgccc 560 Query: 565 ggcacacagtccattgccatgacactcttcttggccacgccggaagtgccaaacaatgtg 624 ||||| |||||| | |||||||| |||||| ||| ||||||| ||||| || ||| Sbjct: 561 ggcacgcagtccctcgccatgacgctcttcgcggcgtcgccggaggtgcccgacggcgtg 620 Query: 625 ctcaccaaggcgttccaggttggcactaaggaggtggagaagatcaagtccaaccttgcc 684 ||||||||||| |||||||||||||| |||||||||||||||||||| |||| ||||| Sbjct: 621 ctcaccaaggccttccaggttggcaccaaggaggtggagaagatcaaatccaggcttgca 680 Query: 685 cccaaaaagag 695 ||||| ||||| Sbjct: 681 cccaagaagag 691 >gb|AC145273.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0055E23, complete sequence Length = 156572 Score = 486 bits (245), Expect = e-134 Identities = 467/541 (86%) Strand = Plus / Plus Query: 155 cagccgtgaaggtgaatgggttcgcttgcaagaccactgtgacggaggatgacttctact 214 ||||||||||||||||||||||||| |||||| | | ||||||||||| |||||||||| Sbjct: 92304 cagccgtgaaggtgaatgggttcgcgtgcaaggcggcggtgacggaggacgacttctact 92363 Query: 215 tcaaggggctgggcaccgcaggcaacaccaacaacacatacggctccctggtcacgggcg 274 |||||||||| | | |||| ||||||||||||||||| |||||||| |||| || |||| Sbjct: 92364 tcaaggggcttgccgccgccggcaacaccaacaacacgtacggctcggtggtgaccggcg 92423 Query: 275 cgaacgtcgagaagttgcctgggctcaacaccctgggcgtgtcaatgtcgcgcatcgatt 334 | ||||| ||||||||||| ||||||||||||||||||||||| ||||| || ||||| | Sbjct: 92424 ccaacgtggagaagttgccggggctcaacaccctgggcgtgtccatgtcccggatcgact 92483 Query: 335 acgcgccggccggcctcaacccgccgcacacccacccgcgcgccaccgagatggtcttcg 394 |||| || | ||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 92484 acgcccccggcggcctcaacccgccgcacacccacccgcgcgccaccgagatggtgttcg 92543 Query: 395 tcctgcagggcatcctcgatgttggcttcataacaactggaaacaagctcattgcgaaga 454 |||||||||||| |||||| || |||||||| || || | |||||||| | |||| Sbjct: 92544 tcctgcagggcaccctcgacgtcggcttcatcaccaccgccaacaagctgtacaccaaga 92603 Query: 455 ccatctcggctggtgatgtcttcgtcttcccccgaggtctggttcacttccagaagaaca 514 ||||||| || || || |||||||||||||| || || ||| | |||||||||||||||| Sbjct: 92604 ccatctctgccggcgacgtcttcgtcttcccgcgcggcctgctccacttccagaagaaca 92663 Query: 515 acggcgacacccccgcctccgtcatctcggccttcaatagccaactgcccggcacacagt 574 ||||||||||||||||| |||||||||| |||||||| ||||| ||||||||||| |||| Sbjct: 92664 acggcgacacccccgccgccgtcatctccgccttcaacagccagctgcccggcacgcagt 92723 Query: 575 ccattgccatgacactcttcttggccacgccggaagtgccaaacaatgtgctcaccaagg 634 || | |||||||| |||||| ||| ||||||| ||||| || ||||||||||||| Sbjct: 92724 ccctcgccatgacgctcttcgcggcgtcgccggaggtgcccgacggcgtgctcaccaagg 92783 Query: 635 cgttccaggttggcactaaggaggtggagaagatcaagtccaaccttgcccccaaaaaga 694 | |||||||||||||| |||||||||||||||||||| |||| ||||| ||||| |||| Sbjct: 92784 ccttccaggttggcaccaaggaggtggagaagatcaaatccaggcttgcacccaagaaga 92843 Query: 695 g 695 | Sbjct: 92844 g 92844 >dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 486 bits (245), Expect = e-134 Identities = 467/541 (86%) Strand = Plus / Plus Query: 155 cagccgtgaaggtgaatgggttcgcttgcaagaccactgtgacggaggatgacttctact 214 ||||||||||||||||||||||||| |||||| | | ||||||||||| |||||||||| Sbjct: 11367027 cagccgtgaaggtgaatgggttcgcgtgcaaggcggcggtgacggaggacgacttctact 11367086 Query: 215 tcaaggggctgggcaccgcaggcaacaccaacaacacatacggctccctggtcacgggcg 274 |||||||||| | | |||| ||||||||||||||||| |||||||| |||| || |||| Sbjct: 11367087 tcaaggggcttgccgccgccggcaacaccaacaacacgtacggctcggtggtgaccggcg 11367146 Query: 275 cgaacgtcgagaagttgcctgggctcaacaccctgggcgtgtcaatgtcgcgcatcgatt 334 | ||||| ||||||||||| ||||||||||||||||||||||| ||||| || ||||| | Sbjct: 11367147 ccaacgtggagaagttgccggggctcaacaccctgggcgtgtccatgtcccggatcgact 11367206 Query: 335 acgcgccggccggcctcaacccgccgcacacccacccgcgcgccaccgagatggtcttcg 394 |||| || | ||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 11367207 acgcccccggcggcctcaacccgccgcacacccacccgcgcgccaccgagatggtgttcg 11367266 Query: 395 tcctgcagggcatcctcgatgttggcttcataacaactggaaacaagctcattgcgaaga 454 |||||||||||| |||||| || |||||||| || || | |||||||| | |||| Sbjct: 11367267 tcctgcagggcaccctcgacgtcggcttcatcaccaccgccaacaagctgtacaccaaga 11367326 Query: 455 ccatctcggctggtgatgtcttcgtcttcccccgaggtctggttcacttccagaagaaca 514 ||||||| || || || |||||||||||||| || || ||| | |||||||||||||||| Sbjct: 11367327 ccatctctgccggcgacgtcttcgtcttcccgcgcggcctgctccacttccagaagaaca 11367386 Query: 515 acggcgacacccccgcctccgtcatctcggccttcaatagccaactgcccggcacacagt 574 ||||||||||||||||| |||||||||| |||||||| ||||| ||||||||||| |||| Sbjct: 11367387 acggcgacacccccgccgccgtcatctccgccttcaacagccagctgcccggcacgcagt 11367446 Query: 575 ccattgccatgacactcttcttggccacgccggaagtgccaaacaatgtgctcaccaagg 634 || | |||||||| |||||| ||| ||||||| ||||| || ||||||||||||| Sbjct: 11367447 ccctcgccatgacgctcttcgcggcgtcgccggaggtgcccgacggcgtgctcaccaagg 11367506 Query: 635 cgttccaggttggcactaaggaggtggagaagatcaagtccaaccttgcccccaaaaaga 694 | |||||||||||||| |||||||||||||||||||| |||| ||||| ||||| |||| Sbjct: 11367507 ccttccaggttggcaccaaggaggtggagaagatcaaatccaggcttgcacccaagaaga 11367566 Query: 695 g 695 | Sbjct: 11367567 g 11367567 >gb|DQ647625.1| Hordeum vulgare subsp. vulgare germin-like protein 6a (GER6a) gene, complete cds Length = 1581 Score = 226 bits (114), Expect = 1e-55 Identities = 345/422 (81%) Strand = Plus / Plus Query: 265 gtcacgggcgcgaacgtcgagaagttgcctgggctcaacaccctgggcgtgtcaatgtcg 324 ||||||||||| ||||| ||||| | || || ||||||||||| ||||| || | || Sbjct: 1094 gtcacgggcgccaacgtggagaaagtcccgggcctcaacaccctcggcgtctccctctct 1153 Query: 325 cgcatcgattacgcgccggccggcctcaacccgccgcacacccacccgcgcgccaccgag 384 |||||||| ||||| || | ||| |||||||||||||||||||||||||||||||||||| Sbjct: 1154 cgcatcgactacgcccccggcgggctcaacccgccgcacacccacccgcgcgccaccgag 1213 Query: 385 atggtcttcgtcctgcagggcatcctcgatgttggcttcataacaactggaaacaagctc 444 | ||||||||||| | ||| ||||| || |||||||| || || | |||||||||| Sbjct: 1214 gtcgtcttcgtcctttacggcgagctcgacgtcggcttcatcaccaccgcaaacaagctc 1273 Query: 445 attgcgaagaccatctcggctggtgatgtcttcgtcttcccccgaggtctggttcacttc 504 |||| ||||||||||| || || ||||||| |||||| ||||| || || |||||| Sbjct: 1274 tttgccaagaccatctcccagggcgacgtcttcgccttcccgcgaggcctcgtgcacttc 1333 Query: 505 cagaagaacaacggcgacacccccgcctccgtcatctcggccttcaatagccaactgccc 564 ||||||||||||||||||| |||||| |||||||||| |||||||| ||||| || ||| Sbjct: 1334 cagaagaacaacggcgacaagcccgccgccgtcatctccgccttcaacagccagctcccc 1393 Query: 565 ggcacacagtccattgccatgacactcttcttggccacgccggaagtgccaaacaatgtg 624 ||||| |||||||| |||||||| |||||| |||| | ||||| || || || | ||| Sbjct: 1394 ggcacgcagtccatcgccatgacgctcttcggggcctccccggaggtacctgacgacgtg 1453 Query: 625 ctcaccaaggcgttccaggttggcactaaggaggtggagaagatcaagtccaaccttgcc 684 ||| ||||||| |||||| | ||||| |||||| || ||||||||| |||| ||||| Sbjct: 1454 ctcgccaaggccttccagatcggcacagtggaggttgacaagatcaaggccaagtttgcc 1513 Query: 685 cc 686 || Sbjct: 1514 cc 1515