BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst012n03 (1196 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001064089.1| Oryza sativa (japonica cultivar-group) Os06g... 694 0.0 dbj|AK121989.1| Oryza sativa (japonica cultivar-group) cDNA clon... 694 0.0 gb|AY847062.1| Avena sativa Aux/IAA1 mRNA, partial cds 379 e-101 dbj|AK063854.1| Oryza sativa (japonica cultivar-group) cDNA clon... 351 4e-93 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 293 8e-76 >ref|NM_001064089.1| Oryza sativa (japonica cultivar-group) Os06g0335500 (Os06g0335500) mRNA, complete cds Length = 1273 Score = 694 bits (350), Expect = 0.0 Identities = 497/546 (91%) Strand = Plus / Plus Query: 430 gaggaggaagaggagaagaagaaggaacaggcgccggcggcaaaggcacaggtggtagga 489 |||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 434 gaggaggaggaggagaagaagaaggcgcaggcgccggcggcgaaggcacaggtggtagga 493 Query: 490 tggccaccaatccgcagttacaggaagaacacgatggcgatgaacctgcctggtccgaaa 549 ||||||||||||||||| |||||||||||||| |||||||||| || ||||| || |||| Sbjct: 494 tggccaccaatccgcagctacaggaagaacaccatggcgatgagccagcctgctctgaaa 553 Query: 550 agcaaagacgatgatgaggcgaagcaggcgccagcgccggggtgcctctatgtcaaggtt 609 |||||||||| | |||||||||||||| || || | || ||||||||||||||||| Sbjct: 554 ggcaaagacgacggcgaggcgaagcaggctccggcatccggttgcctctatgtcaaggtg 613 Query: 610 agcatggatggtgctccttacctcaggaaggtggaccttaagatgtacaagaactacaag 669 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 614 agcatggatggtgctccttacctcaggaaggtggacctcaagatgtacaagaactacaag 673 Query: 670 gagttctcgctggcgctggagaagatgttcagctgcttcaccgttggtcataatgaatca 729 ||| |||| |||| ||||||||||||||||||||||| ||||| |||||| ||||||| Sbjct: 674 gagctctctttggctctggagaagatgttcagctgctttaccgtcggtcatggtgaatca 733 Query: 730 aatgggaaatcggggagagatggattatctgattgccgactgatggatcttaaaaatggg 789 |||||||| || |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 734 aatgggaagtcagggagagatggattatctgattgccgcctgatggatcttaaaaatgga 793 Query: 790 actgaacttgtgttcacttatgaggacaaggatggcgattggatgcttgttggtgatgtt 849 || ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 794 acagaacttgtgctcacttatgaggacaaggatgaagattggatgcttgttggtgatgtt 853 Query: 850 ccatggggaatgttcacggacagctgtaggaggctgaggatcatgaaggggtcagatgca 909 || ||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 854 ccgtggcgaatgttcacagacagctgtaggaggctgaggattatgaaggggtcagatgca 913 Query: 910 gtgggccttgctccaagagccaccgagaagagcaagaatcggaactagtcaaacgatgaa 969 ||||||||||||||||||||||| || |||||||| |||||||||| |||| |||||| Sbjct: 914 gtgggccttgctccaagagccactgacaagagcaaaaatcggaactgagcaaaagatgaa 973 Query: 970 cccaat 975 |||||| Sbjct: 974 cccaat 979 Score = 105 bits (53), Expect = 4e-19 Identities = 95/109 (87%) Strand = Plus / Plus Query: 316 ccgctgacgctggagcttctgcccaagggaggggcgaagcgcgggtttgcggacgccatc 375 ||||||||||| ||||| ||||||||||| ||||| ||||||||||| |||||||||||| Sbjct: 305 ccgctgacgctcgagctgctgcccaagggcggggccaagcgcgggttcgcggacgccatc 364 Query: 376 gtcgggacgcccgccgggctgcggcgggaggcaacggggggcaaggcgg 424 || ||| |||||||| | |||||||||||| | ||||||||||||| Sbjct: 365 gttgggggtcccgccggccagcggcgggaggcggccgggggcaaggcgg 413 Score = 79.8 bits (40), Expect = 2e-11 Identities = 49/52 (94%) Strand = Plus / Plus Query: 191 cgccgtcactggagcgggactacatcgggctgtcgccggcagcggcggcggc 242 ||||| ||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 165 cgccgccacaggagcgggactacatcgggctgtcgccggcggcggcggcggc 216 >dbj|AK121989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109C03, full insert sequence Length = 1277 Score = 694 bits (350), Expect = 0.0 Identities = 497/546 (91%) Strand = Plus / Plus Query: 430 gaggaggaagaggagaagaagaaggaacaggcgccggcggcaaaggcacaggtggtagga 489 |||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 438 gaggaggaggaggagaagaagaaggcgcaggcgccggcggcgaaggcacaggtggtagga 497 Query: 490 tggccaccaatccgcagttacaggaagaacacgatggcgatgaacctgcctggtccgaaa 549 ||||||||||||||||| |||||||||||||| |||||||||| || ||||| || |||| Sbjct: 498 tggccaccaatccgcagctacaggaagaacaccatggcgatgagccagcctgctctgaaa 557 Query: 550 agcaaagacgatgatgaggcgaagcaggcgccagcgccggggtgcctctatgtcaaggtt 609 |||||||||| | |||||||||||||| || || | || ||||||||||||||||| Sbjct: 558 ggcaaagacgacggcgaggcgaagcaggctccggcatccggttgcctctatgtcaaggtg 617 Query: 610 agcatggatggtgctccttacctcaggaaggtggaccttaagatgtacaagaactacaag 669 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 618 agcatggatggtgctccttacctcaggaaggtggacctcaagatgtacaagaactacaag 677 Query: 670 gagttctcgctggcgctggagaagatgttcagctgcttcaccgttggtcataatgaatca 729 ||| |||| |||| ||||||||||||||||||||||| ||||| |||||| ||||||| Sbjct: 678 gagctctctttggctctggagaagatgttcagctgctttaccgtcggtcatggtgaatca 737 Query: 730 aatgggaaatcggggagagatggattatctgattgccgactgatggatcttaaaaatggg 789 |||||||| || |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 738 aatgggaagtcagggagagatggattatctgattgccgcctgatggatcttaaaaatgga 797 Query: 790 actgaacttgtgttcacttatgaggacaaggatggcgattggatgcttgttggtgatgtt 849 || ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 798 acagaacttgtgctcacttatgaggacaaggatgaagattggatgcttgttggtgatgtt 857 Query: 850 ccatggggaatgttcacggacagctgtaggaggctgaggatcatgaaggggtcagatgca 909 || ||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 858 ccgtggcgaatgttcacagacagctgtaggaggctgaggattatgaaggggtcagatgca 917 Query: 910 gtgggccttgctccaagagccaccgagaagagcaagaatcggaactagtcaaacgatgaa 969 ||||||||||||||||||||||| || |||||||| |||||||||| |||| |||||| Sbjct: 918 gtgggccttgctccaagagccactgacaagagcaaaaatcggaactgagcaaaagatgaa 977 Query: 970 cccaat 975 |||||| Sbjct: 978 cccaat 983 Score = 105 bits (53), Expect = 4e-19 Identities = 95/109 (87%) Strand = Plus / Plus Query: 316 ccgctgacgctggagcttctgcccaagggaggggcgaagcgcgggtttgcggacgccatc 375 ||||||||||| ||||| ||||||||||| ||||| ||||||||||| |||||||||||| Sbjct: 306 ccgctgacgctcgagctgctgcccaagggcggggccaagcgcgggttcgcggacgccatc 365 Query: 376 gtcgggacgcccgccgggctgcggcgggaggcaacggggggcaaggcgg 424 || ||| |||||||| | |||||||||||| | ||||||||||||| Sbjct: 366 gttgggggtcccgccggccagcggcgggaggcggccgggggcaaggcgg 414 Score = 79.8 bits (40), Expect = 2e-11 Identities = 49/52 (94%) Strand = Plus / Plus Query: 191 cgccgtcactggagcgggactacatcgggctgtcgccggcagcggcggcggc 242 ||||| ||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 166 cgccgccacaggagcgggactacatcgggctgtcgccggcggcggcggcggc 217 >gb|AY847062.1| Avena sativa Aux/IAA1 mRNA, partial cds Length = 552 Score = 379 bits (191), Expect = e-101 Identities = 339/387 (87%), Gaps = 1/387 (0%) Strand = Plus / Plus Query: 429 ggaggaggaagaggagaagaagaaggaacaggcgccggcggcaaaggcacaggtggtagg 488 ||||||||| || ||||||||||||| |||| |||||| |||||||||||||||||||| Sbjct: 155 ggaggaggacgacgagaagaagaaggcgcagg-gccggccgcaaaggcacaggtggtagg 213 Query: 489 atggccaccaatccgcagttacaggaagaacacgatggcgatgaacctgcctggtccgaa 548 ||||||||||||||||||||| |||||||||| ||||||| || ||| ||| ||| | Sbjct: 214 atggccaccaatccgcagttatcggaagaacaccatggcgacgagcctatctgctccaag 273 Query: 549 aagcaaagacgatgatgaggcgaagcaggcgccagcgccggggtgcctctatgtcaaggt 608 |||||||||||| | ||||| ||||||||||| | | | |||||||| ||||||||||| Sbjct: 274 aagcaaagacgaggtcgaggcaaagcaggcgcccgtggcagggtgcctatatgtcaaggt 333 Query: 609 tagcatggatggtgctccttacctcaggaaggtggaccttaagatgtacaagaactacaa 668 ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 334 tagcatggatggtgcgccttacctcaggaaggtggatcttaagatgtacaagaactacaa 393 Query: 669 ggagttctcgctggcgctggagaagatgttcagctgcttcaccgttggtcataatgaatc 728 ||| |||| |||| ||||||||| | |||||||||||| || ||||||||| |||||| Sbjct: 394 ggacctctctctggagctggagaaaaagttcagctgctttactgttggtcatggtgaatc 453 Query: 729 aaatgggaaatcggggagagatggattatctgattgccgactgatggatcttaaaaatgg 788 |||||| |||||||| |||||||| ||||||||||||||||||||||| | ||||| || Sbjct: 454 aaatggaaaatcgggaagagatggcttatctgattgccgactgatggaccctaaaagcgg 513 Query: 789 gactgaacttgtgttcacttatgagga 815 | ||||||||||| |||| || ||||| Sbjct: 514 ggctgaacttgtgctcacatacgagga 540 >dbj|AK063854.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-D03, full insert sequence Length = 552 Score = 351 bits (177), Expect = 4e-93 Identities = 234/253 (92%) Strand = Plus / Plus Query: 723 tgaatcaaatgggaaatcggggagagatggattatctgattgccgactgatggatcttaa 782 ||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||| Sbjct: 6 tgaatcaaatgggaagtcagggagagatggattatctgattgccgcctgatggatcttaa 65 Query: 783 aaatgggactgaacttgtgttcacttatgaggacaaggatggcgattggatgcttgttgg 842 |||||| || ||||||||| ||||||||||||||||||||| ||||||||||||||||| Sbjct: 66 aaatggaacagaacttgtgctcacttatgaggacaaggatgaagattggatgcttgttgg 125 Query: 843 tgatgttccatggggaatgttcacggacagctgtaggaggctgaggatcatgaaggggtc 902 ||||||||| ||| |||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 126 tgatgttccgtggcgaatgttcacagacagctgtaggaggctgaggattatgaaggggtc 185 Query: 903 agatgcagtgggccttgctccaagagccaccgagaagagcaagaatcggaactagtcaaa 962 |||||||||||||||||||||||||||||| || |||||||| |||||||||| |||| Sbjct: 186 agatgcagtgggccttgctccaagagccactgacaagagcaaaaatcggaactgagcaaa 245 Query: 963 cgatgaacccaat 975 |||||||||||| Sbjct: 246 agatgaacccaat 258 >dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 293 bits (148), Expect = 8e-76 Identities = 217/240 (90%) Strand = Plus / Plus Query: 474 ggcacaggtggtaggatggccaccaatccgcagttacaggaagaacacgatggcgatgaa 533 ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 13189404 ggcacaggtggtaggatggccaccaatccgcagctacaggaagaacaccatggcgatgag 13189463 Query: 534 cctgcctggtccgaaaagcaaagacgatgatgaggcgaagcaggcgccagcgccggggtg 593 || ||||| || |||| |||||||||| | |||||||||||||| || || | || || Sbjct: 13189464 ccagcctgctctgaaaggcaaagacgacggcgaggcgaagcaggctccggcatccggttg 13189523 Query: 594 cctctatgtcaaggttagcatggatggtgctccttacctcaggaaggtggaccttaagat 653 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 13189524 cctctatgtcaaggtgagcatggatggtgctccttacctcaggaaggtggacctcaagat 13189583 Query: 654 gtacaagaactacaaggagttctcgctggcgctggagaagatgttcagctgcttcaccgt 713 ||||||||||||||||||| |||| |||| ||||||||||||||||||||||| ||||| Sbjct: 13189584 gtacaagaactacaaggagctctctttggctctggagaagatgttcagctgctttaccgt 13189643 Score = 192 bits (97), Expect = 2e-45 Identities = 121/129 (93%) Strand = Plus / Plus Query: 723 tgaatcaaatgggaaatcggggagagatggattatctgattgccgactgatggatcttaa 782 ||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||| Sbjct: 13190341 tgaatcaaatgggaagtcagggagagatggattatctgattgccgcctgatggatcttaa 13190400 Query: 783 aaatgggactgaacttgtgttcacttatgaggacaaggatggcgattggatgcttgttgg 842 |||||| || ||||||||| ||||||||||||||||||||| ||||||||||||||||| Sbjct: 13190401 aaatggaacagaacttgtgctcacttatgaggacaaggatgaagattggatgcttgttgg 13190460 Query: 843 tgatgttcc 851 ||||||||| Sbjct: 13190461 tgatgttcc 13190469 Score = 109 bits (55), Expect = 3e-20 Identities = 61/63 (96%) Strand = Plus / Plus Query: 857 gaatgttcacggacagctgtaggaggctgaggatcatgaaggggtcagatgcagtgggcc 916 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 13191083 gaatgttcacagacagctgtaggaggctgaggattatgaaggggtcagatgcagtgggcc 13191142 Query: 917 ttg 919 ||| Sbjct: 13191143 ttg 13191145 Score = 105 bits (53), Expect = 4e-19 Identities = 95/109 (87%) Strand = Plus / Plus Query: 316 ccgctgacgctggagcttctgcccaagggaggggcgaagcgcgggtttgcggacgccatc 375 ||||||||||| ||||| ||||||||||| ||||| ||||||||||| |||||||||||| Sbjct: 13188448 ccgctgacgctcgagctgctgcccaagggcggggccaagcgcgggttcgcggacgccatc 13188507 Query: 376 gtcgggacgcccgccgggctgcggcgggaggcaacggggggcaaggcgg 424 || ||| |||||||| | |||||||||||| | ||||||||||||| Sbjct: 13188508 gttgggggtcccgccggccagcggcgggaggcggccgggggcaaggcgg 13188556 Score = 79.8 bits (40), Expect = 2e-11 Identities = 49/52 (94%) Strand = Plus / Plus Query: 191 cgccgtcactggagcgggactacatcgggctgtcgccggcagcggcggcggc 242 ||||| ||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 13188308 cgccgccacaggagcgggactacatcgggctgtcgccggcggcggcggcggc 13188359