BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst012m07
         (660 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CR855155.1| Oryza sativa genomic DNA, chromosome 4, BAC clon...   157   7e-35
ref|NM_001059327.1| Oryza sativa (japonica cultivar-group) Os04g...   157   7e-35
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...   157   7e-35
dbj|AK111485.1| Oryza sativa (japonica cultivar-group) cDNA clon...   157   7e-35
emb|AL731628.4|OSJN00282 Oryza sativa genomic DNA, chromosome 4,...   145   3e-31

>emb|CR855155.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0525E10, complete
              sequence
          Length = 116856

 Score =  157 bits (79), Expect = 7e-35
 Identities = 88/91 (96%)
 Strand = Plus / Minus

                                                                          
Query: 345    cgagcaccgccttcatcagcagcagcccggcggtgccgctccccgccggcgtcacggact 404
              ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 108224 cgagcacggccttcatcagcagcagcccggcggtgccgctccccgccggcgtcaccgact 108165

                                             
Query: 405    cggccaccgtcctgcccatgcccacccccgg 435
              | |||||||||||||||||||||||||||||
Sbjct: 108164 ccgccaccgtcctgcccatgcccacccccgg 108134


>ref|NM_001059327.1| Oryza sativa (japonica cultivar-group) Os04g0422700 (Os04g0422700)
           mRNA, complete cds
          Length = 1062

 Score =  157 bits (79), Expect = 7e-35
 Identities = 88/91 (96%)
 Strand = Plus / Plus

                                                                       
Query: 345 cgagcaccgccttcatcagcagcagcccggcggtgccgctccccgccggcgtcacggact 404
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 439 cgagcacggccttcatcagcagcagcccggcggtgccgctccccgccggcgtcaccgact 498

                                          
Query: 405 cggccaccgtcctgcccatgcccacccccgg 435
           | |||||||||||||||||||||||||||||
Sbjct: 499 ccgccaccgtcctgcccatgcccacccccgg 529


>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score =  157 bits (79), Expect = 7e-35
 Identities = 88/91 (96%)
 Strand = Plus / Minus

                                                                            
Query: 345      cgagcaccgccttcatcagcagcagcccggcggtgccgctccccgccggcgtcacggact 404
                ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 20913583 cgagcacggccttcatcagcagcagcccggcggtgccgctccccgccggcgtcaccgact 20913524

                                               
Query: 405      cggccaccgtcctgcccatgcccacccccgg 435
                | |||||||||||||||||||||||||||||
Sbjct: 20913523 ccgccaccgtcctgcccatgcccacccccgg 20913493


>dbj|AK111485.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-G05, full
           insert sequence
          Length = 1070

 Score =  157 bits (79), Expect = 7e-35
 Identities = 88/91 (96%)
 Strand = Plus / Plus

                                                                       
Query: 345 cgagcaccgccttcatcagcagcagcccggcggtgccgctccccgccggcgtcacggact 404
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 447 cgagcacggccttcatcagcagcagcccggcggtgccgctccccgccggcgtcaccgact 506

                                          
Query: 405 cggccaccgtcctgcccatgcccacccccgg 435
           | |||||||||||||||||||||||||||||
Sbjct: 507 ccgccaccgtcctgcccatgcccacccccgg 537


>emb|AL731628.4|OSJN00282 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0088C09,
             complete sequence
          Length = 96079

 Score =  145 bits (73), Expect = 3e-31
 Identities = 82/85 (96%)
 Strand = Plus / Minus

                                                                         
Query: 345   cgagcaccgccttcatcagcagcagcccggcggtgccgctccccgccggcgtcacggact 404
             ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 16807 cgagcacggccttcatcagcagcagcccggcggtgccgctccccgccggcgtcaccgact 16748

                                      
Query: 405   cggccaccgtcctgcccatgcccac 429
             | |||||||||||||||||||||||
Sbjct: 16747 ccgccaccgtcctgcccatgcccac 16723