BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst012l18 (1235 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AY360386.1| Oryza sativa (japonica cultivar-group) chromosome... 196 1e-46 dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 196 1e-46 dbj|AP005832.2| Oryza sativa (japonica cultivar-group) genomic D... 196 1e-46 dbj|AP004228.2| Oryza sativa (japonica cultivar-group) genomic D... 196 1e-46 emb|CT830878.1| Oryza sativa (indica cultivar-group) cDNA clone:... 88 1e-13 >gb|AY360386.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0017M13, complete sequence Length = 161902 Score = 196 bits (99), Expect = 1e-46 Identities = 168/191 (87%) Strand = Plus / Minus Query: 548 gattagtgcaacttcagaaagtgtcccttgtcctgagaaccttccatcagatggttcaga 607 |||| ||||| |||||||||||| |||||||||||||||| |||| ||| |||| ||||| Sbjct: 111246 gattggtgcaccttcagaaagtgccccttgtcctgagaactttccgtcaaatggctcaga 111187 Query: 608 atgggttgagcttcttgtgaatgagatggcaagcgcttctaacatggacgatgcaaaggc 667 |||||| ||||| ||||||||||||||| ||| |||||||||||||| ||||||||| | Sbjct: 111186 atgggtcgagctacttgtgaatgagatgacaactgcttctaacatggatgatgcaaagtc 111127 Query: 668 tcgtgcctccagagcgctggaggtttttgagaaggctgtgatatctcgtgtcaatgcaca 727 ||||||| |||||| |||||||| |||||||||||||||| | |||| ||||||||| || Sbjct: 111126 tcgtgccaccagagtgctggaggcttttgagaaggctgtggtgtctcatgtcaatgctca 111067 Query: 728 agcaccgcatg 738 || ||| |||| Sbjct: 111066 aggacctcatg 111056 Score = 117 bits (59), Expect = 1e-22 Identities = 83/91 (91%) Strand = Plus / Minus Query: 385 tgattgaaaaggctctggaagaatctggaaatgatttggattcagcaataaagagtttgg 444 ||||||||||||||||||| ||||||||||| || ||||||||||||||| ||||||| Sbjct: 114712 tgattgaaaaggctctggacaaatctggaaataatgtggattcagcaataaggagtttgc 114653 Query: 445 ttaatctacatttggaatctgtagaaaataa 475 |||||||||||||||||||||| ||||||| Sbjct: 114652 ttaatctacatttggaatctgtgcaaaataa 114622 Score = 113 bits (57), Expect = 2e-21 Identities = 149/179 (83%), Gaps = 3/179 (1%) Strand = Plus / Minus Query: 748 aggaaaatacagtgcttaaggagcaactggattcacttataagagagaacgccatcctga 807 |||||||| |||||||||||| |||| |||| || |||| |||||| ||| |||| |||| Sbjct: 110832 aggaaaatgcagtgcttaaggggcaaatggaatcgcttacaagagaaaacaccattctga 110773 Query: 808 agagagcattcgtgatacagcatgaacagcaaaaggactatgatgagaagaatgaagaac 867 |||||||||| | |||||||||||| | || |||||||||||| ||||||| |||||| Sbjct: 110772 agagagcatttgcgatacagcatgagcggc---aggactatgatgcgaagaatcaagaac 110716 Query: 868 tccatcaaatgaagcagctcgttgctcagtaccaagaacaagttaggaaccttgaggta 926 | || | ||| |||| | ||||| ||| ||||||||||||||| |||||||||||| Sbjct: 110715 tacaggatgagaaacagcgcattgctgagttccaagaacaagttagaaaccttgaggta 110657 Score = 105 bits (53), Expect = 4e-19 Identities = 68/73 (93%) Strand = Plus / Minus Query: 939 ttgaacatgcaccttaggcaagctcagcagggcagctcaattccagggcgcttccacccg 998 |||| ||||| |||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 110133 ttgagcatgctccttaggcaagctcagcagggcagctcaattccagggcgctttaatccg 110074 Query: 999 gatgttttctaag 1011 ||||||||||||| Sbjct: 110073 gatgttttctaag 110061 Score = 79.8 bits (40), Expect = 2e-11 Identities = 43/44 (97%) Strand = Plus / Minus Query: 1107 gcaaatcttaagcttaaatttttgttgtggacgtgtaaatttat 1150 |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 109995 gcaaatcttaagcttaaatttttgttgtggacgtgtaagtttat 109952 >dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 196 bits (99), Expect = 1e-46 Identities = 168/191 (87%) Strand = Plus / Minus Query: 548 gattagtgcaacttcagaaagtgtcccttgtcctgagaaccttccatcagatggttcaga 607 |||| ||||| |||||||||||| |||||||||||||||| |||| ||| |||| ||||| Sbjct: 13386773 gattggtgcaccttcagaaagtgccccttgtcctgagaactttccgtcaaatggctcaga 13386714 Query: 608 atgggttgagcttcttgtgaatgagatggcaagcgcttctaacatggacgatgcaaaggc 667 |||||| ||||| ||||||||||||||| ||| |||||||||||||| ||||||||| | Sbjct: 13386713 atgggtcgagctacttgtgaatgagatgacaactgcttctaacatggatgatgcaaagtc 13386654 Query: 668 tcgtgcctccagagcgctggaggtttttgagaaggctgtgatatctcgtgtcaatgcaca 727 ||||||| |||||| |||||||| |||||||||||||||| | |||| ||||||||| || Sbjct: 13386653 tcgtgccaccagagtgctggaggcttttgagaaggctgtggtgtctcatgtcaatgctca 13386594 Query: 728 agcaccgcatg 738 || ||| |||| Sbjct: 13386593 aggacctcatg 13386583 Score = 117 bits (59), Expect = 1e-22 Identities = 83/91 (91%) Strand = Plus / Minus Query: 385 tgattgaaaaggctctggaagaatctggaaatgatttggattcagcaataaagagtttgg 444 ||||||||||||||||||| ||||||||||| || ||||||||||||||| ||||||| Sbjct: 13390239 tgattgaaaaggctctggacaaatctggaaataatgtggattcagcaataaggagtttgc 13390180 Query: 445 ttaatctacatttggaatctgtagaaaataa 475 |||||||||||||||||||||| ||||||| Sbjct: 13390179 ttaatctacatttggaatctgtgcaaaataa 13390149 Score = 113 bits (57), Expect = 2e-21 Identities = 149/179 (83%), Gaps = 3/179 (1%) Strand = Plus / Minus Query: 748 aggaaaatacagtgcttaaggagcaactggattcacttataagagagaacgccatcctga 807 |||||||| |||||||||||| |||| |||| || |||| |||||| ||| |||| |||| Sbjct: 13386359 aggaaaatgcagtgcttaaggggcaaatggaatcgcttacaagagaaaacaccattctga 13386300 Query: 808 agagagcattcgtgatacagcatgaacagcaaaaggactatgatgagaagaatgaagaac 867 |||||||||| | |||||||||||| | || |||||||||||| ||||||| |||||| Sbjct: 13386299 agagagcatttgcgatacagcatgagcggc---aggactatgatgcgaagaatcaagaac 13386243 Query: 868 tccatcaaatgaagcagctcgttgctcagtaccaagaacaagttaggaaccttgaggta 926 | || | ||| |||| | ||||| ||| ||||||||||||||| |||||||||||| Sbjct: 13386242 tacaggatgagaaacagcgcattgctgagttccaagaacaagttagaaaccttgaggta 13386184 Score = 105 bits (53), Expect = 4e-19 Identities = 68/73 (93%) Strand = Plus / Minus Query: 939 ttgaacatgcaccttaggcaagctcagcagggcagctcaattccagggcgcttccacccg 998 |||| ||||| |||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 13385660 ttgagcatgctccttaggcaagctcagcagggcagctcaattccagggcgctttaatccg 13385601 Query: 999 gatgttttctaag 1011 ||||||||||||| Sbjct: 13385600 gatgttttctaag 13385588 Score = 79.8 bits (40), Expect = 2e-11 Identities = 43/44 (97%) Strand = Plus / Minus Query: 1107 gcaaatcttaagcttaaatttttgttgtggacgtgtaaatttat 1150 |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 13385522 gcaaatcttaagcttaaatttttgttgtggacgtgtaagtttat 13385479 >dbj|AP005832.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1136D08 Length = 176635 Score = 196 bits (99), Expect = 1e-46 Identities = 168/191 (87%) Strand = Plus / Minus Query: 548 gattagtgcaacttcagaaagtgtcccttgtcctgagaaccttccatcagatggttcaga 607 |||| ||||| |||||||||||| |||||||||||||||| |||| ||| |||| ||||| Sbjct: 138242 gattggtgcaccttcagaaagtgccccttgtcctgagaactttccgtcaaatggctcaga 138183 Query: 608 atgggttgagcttcttgtgaatgagatggcaagcgcttctaacatggacgatgcaaaggc 667 |||||| ||||| ||||||||||||||| ||| |||||||||||||| ||||||||| | Sbjct: 138182 atgggtcgagctacttgtgaatgagatgacaactgcttctaacatggatgatgcaaagtc 138123 Query: 668 tcgtgcctccagagcgctggaggtttttgagaaggctgtgatatctcgtgtcaatgcaca 727 ||||||| |||||| |||||||| |||||||||||||||| | |||| ||||||||| || Sbjct: 138122 tcgtgccaccagagtgctggaggcttttgagaaggctgtggtgtctcatgtcaatgctca 138063 Query: 728 agcaccgcatg 738 || ||| |||| Sbjct: 138062 aggacctcatg 138052 Score = 117 bits (59), Expect = 1e-22 Identities = 83/91 (91%) Strand = Plus / Minus Query: 385 tgattgaaaaggctctggaagaatctggaaatgatttggattcagcaataaagagtttgg 444 ||||||||||||||||||| ||||||||||| || ||||||||||||||| ||||||| Sbjct: 141708 tgattgaaaaggctctggacaaatctggaaataatgtggattcagcaataaggagtttgc 141649 Query: 445 ttaatctacatttggaatctgtagaaaataa 475 |||||||||||||||||||||| ||||||| Sbjct: 141648 ttaatctacatttggaatctgtgcaaaataa 141618 Score = 113 bits (57), Expect = 2e-21 Identities = 149/179 (83%), Gaps = 3/179 (1%) Strand = Plus / Minus Query: 748 aggaaaatacagtgcttaaggagcaactggattcacttataagagagaacgccatcctga 807 |||||||| |||||||||||| |||| |||| || |||| |||||| ||| |||| |||| Sbjct: 137828 aggaaaatgcagtgcttaaggggcaaatggaatcgcttacaagagaaaacaccattctga 137769 Query: 808 agagagcattcgtgatacagcatgaacagcaaaaggactatgatgagaagaatgaagaac 867 |||||||||| | |||||||||||| | || |||||||||||| ||||||| |||||| Sbjct: 137768 agagagcatttgcgatacagcatgagcggc---aggactatgatgcgaagaatcaagaac 137712 Query: 868 tccatcaaatgaagcagctcgttgctcagtaccaagaacaagttaggaaccttgaggta 926 | || | ||| |||| | ||||| ||| ||||||||||||||| |||||||||||| Sbjct: 137711 tacaggatgagaaacagcgcattgctgagttccaagaacaagttagaaaccttgaggta 137653 Score = 105 bits (53), Expect = 4e-19 Identities = 68/73 (93%) Strand = Plus / Minus Query: 939 ttgaacatgcaccttaggcaagctcagcagggcagctcaattccagggcgcttccacccg 998 |||| ||||| |||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 137129 ttgagcatgctccttaggcaagctcagcagggcagctcaattccagggcgctttaatccg 137070 Query: 999 gatgttttctaag 1011 ||||||||||||| Sbjct: 137069 gatgttttctaag 137057 Score = 79.8 bits (40), Expect = 2e-11 Identities = 43/44 (97%) Strand = Plus / Minus Query: 1107 gcaaatcttaagcttaaatttttgttgtggacgtgtaaatttat 1150 |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 136991 gcaaatcttaagcttaaatttttgttgtggacgtgtaagtttat 136948 >dbj|AP004228.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1120_B07 Length = 118763 Score = 196 bits (99), Expect = 1e-46 Identities = 168/191 (87%) Strand = Plus / Minus Query: 548 gattagtgcaacttcagaaagtgtcccttgtcctgagaaccttccatcagatggttcaga 607 |||| ||||| |||||||||||| |||||||||||||||| |||| ||| |||| ||||| Sbjct: 23500 gattggtgcaccttcagaaagtgccccttgtcctgagaactttccgtcaaatggctcaga 23441 Query: 608 atgggttgagcttcttgtgaatgagatggcaagcgcttctaacatggacgatgcaaaggc 667 |||||| ||||| ||||||||||||||| ||| |||||||||||||| ||||||||| | Sbjct: 23440 atgggtcgagctacttgtgaatgagatgacaactgcttctaacatggatgatgcaaagtc 23381 Query: 668 tcgtgcctccagagcgctggaggtttttgagaaggctgtgatatctcgtgtcaatgcaca 727 ||||||| |||||| |||||||| |||||||||||||||| | |||| ||||||||| || Sbjct: 23380 tcgtgccaccagagtgctggaggcttttgagaaggctgtggtgtctcatgtcaatgctca 23321 Query: 728 agcaccgcatg 738 || ||| |||| Sbjct: 23320 aggacctcatg 23310 Score = 117 bits (59), Expect = 1e-22 Identities = 83/91 (91%) Strand = Plus / Minus Query: 385 tgattgaaaaggctctggaagaatctggaaatgatttggattcagcaataaagagtttgg 444 ||||||||||||||||||| ||||||||||| || ||||||||||||||| ||||||| Sbjct: 26966 tgattgaaaaggctctggacaaatctggaaataatgtggattcagcaataaggagtttgc 26907 Query: 445 ttaatctacatttggaatctgtagaaaataa 475 |||||||||||||||||||||| ||||||| Sbjct: 26906 ttaatctacatttggaatctgtgcaaaataa 26876 Score = 113 bits (57), Expect = 2e-21 Identities = 149/179 (83%), Gaps = 3/179 (1%) Strand = Plus / Minus Query: 748 aggaaaatacagtgcttaaggagcaactggattcacttataagagagaacgccatcctga 807 |||||||| |||||||||||| |||| |||| || |||| |||||| ||| |||| |||| Sbjct: 23086 aggaaaatgcagtgcttaaggggcaaatggaatcgcttacaagagaaaacaccattctga 23027 Query: 808 agagagcattcgtgatacagcatgaacagcaaaaggactatgatgagaagaatgaagaac 867 |||||||||| | |||||||||||| | || |||||||||||| ||||||| |||||| Sbjct: 23026 agagagcatttgcgatacagcatgagcggc---aggactatgatgcgaagaatcaagaac 22970 Query: 868 tccatcaaatgaagcagctcgttgctcagtaccaagaacaagttaggaaccttgaggta 926 | || | ||| |||| | ||||| ||| ||||||||||||||| |||||||||||| Sbjct: 22969 tacaggatgagaaacagcgcattgctgagttccaagaacaagttagaaaccttgaggta 22911 Score = 105 bits (53), Expect = 4e-19 Identities = 68/73 (93%) Strand = Plus / Minus Query: 939 ttgaacatgcaccttaggcaagctcagcagggcagctcaattccagggcgcttccacccg 998 |||| ||||| |||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 22387 ttgagcatgctccttaggcaagctcagcagggcagctcaattccagggcgctttaatccg 22328 Query: 999 gatgttttctaag 1011 ||||||||||||| Sbjct: 22327 gatgttttctaag 22315 Score = 79.8 bits (40), Expect = 2e-11 Identities = 43/44 (97%) Strand = Plus / Minus Query: 1107 gcaaatcttaagcttaaatttttgttgtggacgtgtaaatttat 1150 |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22249 gcaaatcttaagcttaaatttttgttgtggacgtgtaagtttat 22206 >emb|CT830878.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA113L12, full insert sequence Length = 1802 Score = 87.7 bits (44), Expect = 1e-13 Identities = 98/116 (84%) Strand = Plus / Plus Query: 879 aagcagctcgttgctcagtaccaagaacaagttaggaaccttgaggtaaataactacgcg 938 |||||||| ||||||||||||||||| ||| |||| | ||| |||||||| ||||| || Sbjct: 788 aagcagctggttgctcagtaccaagagcaaattagaagcctggaggtaaacaactatgca 847 Query: 939 ttgaacatgcaccttaggcaagctcagcagggcagctcaattccagggcgcttcca 994 || |||||| ||||||||||||||||| | || ||| |||||||||| |||||| Sbjct: 848 ctgtccatgcatcttaggcaagctcagcaagccaactcgattccagggcacttcca 903 Score = 81.8 bits (41), Expect = 6e-12 Identities = 80/93 (86%) Strand = Plus / Plus Query: 609 tgggttgagcttcttgtgaatgagatggcaagcgcttctaacatggacgatgcaaaggct 668 ||||||||| |||||||||| |||||| | | || ||||||||||| |||||||||||| Sbjct: 524 tgggttgagattcttgtgaacgagatgactaatgcctctaacatggatgatgcaaaggct 583 Query: 669 cgtgcctccagagcgctggaggtttttgagaag 701 |||||||| |||| ||||||| ||||||||| Sbjct: 584 cgtgcctctagagtattggaggtgtttgagaag 616