BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst012i19 (668 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001050334.1| Oryza sativa (japonica cultivar-group) Os01g... 359 9e-96 dbj|AK064663.1| Oryza sativa (japonica cultivar-group) cDNA clon... 359 9e-96 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 84 8e-13 dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic D... 84 8e-13 >ref|NM_001050334.1| Oryza sativa (japonica cultivar-group) Os01g0666200 (Os01g0666200) mRNA, partial cds Length = 713 Score = 359 bits (181), Expect = 9e-96 Identities = 303/343 (88%), Gaps = 8/343 (2%) Strand = Plus / Plus Query: 222 cgccgccccaagaagccgcccaccgccttcttctacttcatggaggatttccggaaaact 281 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 240 cgccgccccaagaagccgcccaccgccttcttctacttcatggaggattttcggaaaact 299 Query: 282 tttaaagaagaaaatccaagtgtaaaatcaatgcaggaaatagggaaggcatgcggcgag 341 | || ||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 300 tacaaggaagaaaatccaagtgtaaaatcaatgcaagaagtagggaaggcatgtggcgag 359 Query: 342 aaatggaatgcaatgacatttgaggaaaaggtgaagtactatgacctagctactgagagg 401 ||||||||| |||||||||||||||||| |||||||| ||||| |||| || |||| | Sbjct: 360 aaatggaatacaatgacatttgaggaaagagtgaagtattatgatatagcaaccgagaag 419 Query: 402 cgcgcagagtttgagaaggcgatggctgaatataacaagaaaaaggaaagcggtgaattg 461 || ||||||| |||||||||| ||||||||| | |||||||||||||||||||||||||| Sbjct: 420 cgtgcagagtatgagaaggcggtggctgaatttgacaagaaaaaggaaagcggtgaattg 479 Query: 462 tctgaggaatcagattacgactagaagtgaacattg---tgttgttctgatggttcacc- 517 || |||||||||||||||||||||| |||||| | | ||||||| ||||||||||| Sbjct: 480 tccgaggaatcagattacgactagaggtgaacgtcgggtagttgttccgatggttcaccc 539 Query: 518 ----aactggatgaaccaattaattgtgtattacagaactgag 556 || |||||| || ||| |||||| ||||||||||||||| Sbjct: 540 aagtaattggatggacgaatcaattgtatattacagaactgag 582 >dbj|AK064663.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-A10, full insert sequence Length = 722 Score = 359 bits (181), Expect = 9e-96 Identities = 303/343 (88%), Gaps = 8/343 (2%) Strand = Plus / Plus Query: 222 cgccgccccaagaagccgcccaccgccttcttctacttcatggaggatttccggaaaact 281 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 249 cgccgccccaagaagccgcccaccgccttcttctacttcatggaggattttcggaaaact 308 Query: 282 tttaaagaagaaaatccaagtgtaaaatcaatgcaggaaatagggaaggcatgcggcgag 341 | || ||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 309 tacaaggaagaaaatccaagtgtaaaatcaatgcaagaagtagggaaggcatgtggcgag 368 Query: 342 aaatggaatgcaatgacatttgaggaaaaggtgaagtactatgacctagctactgagagg 401 ||||||||| |||||||||||||||||| |||||||| ||||| |||| || |||| | Sbjct: 369 aaatggaatacaatgacatttgaggaaagagtgaagtattatgatatagcaaccgagaag 428 Query: 402 cgcgcagagtttgagaaggcgatggctgaatataacaagaaaaaggaaagcggtgaattg 461 || ||||||| |||||||||| ||||||||| | |||||||||||||||||||||||||| Sbjct: 429 cgtgcagagtatgagaaggcggtggctgaatttgacaagaaaaaggaaagcggtgaattg 488 Query: 462 tctgaggaatcagattacgactagaagtgaacattg---tgttgttctgatggttcacc- 517 || |||||||||||||||||||||| |||||| | | ||||||| ||||||||||| Sbjct: 489 tccgaggaatcagattacgactagaggtgaacgtcgggtagttgttccgatggttcaccc 548 Query: 518 ----aactggatgaaccaattaattgtgtattacagaactgag 556 || |||||| || ||| |||||| ||||||||||||||| Sbjct: 549 aagtaattggatggacgaatcaattgtatattacagaactgag 591 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 83.8 bits (42), Expect = 8e-13 Identities = 42/42 (100%) Strand = Plus / Plus Query: 222 cgccgccccaagaagccgcccaccgccttcttctacttcatg 263 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 27230016 cgccgccccaagaagccgcccaccgccttcttctacttcatg 27230057 Score = 83.8 bits (42), Expect = 8e-13 Identities = 101/120 (84%), Gaps = 8/120 (6%) Strand = Plus / Plus Query: 445 aggaaagcggtgaattgtctgaggaatcagattacgactagaagtgaacattg---tgtt 501 ||||||||||||||||||| |||||||||||||||||||||| |||||| | | ||| Sbjct: 27232882 aggaaagcggtgaattgtccgaggaatcagattacgactagaggtgaacgtcgggtagtt 27232941 Query: 502 gttctgatggttcacc-----aactggatgaaccaattaattgtgtattacagaactgag 556 |||| ||||||||||| || |||||| || ||| |||||| ||||||||||||||| Sbjct: 27232942 gttccgatggttcacccaagtaattggatggacgaatcaattgtatattacagaactgag 27233001 >dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0063G05 Length = 182681 Score = 83.8 bits (42), Expect = 8e-13 Identities = 42/42 (100%) Strand = Plus / Plus Query: 222 cgccgccccaagaagccgcccaccgccttcttctacttcatg 263 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 10533 cgccgccccaagaagccgcccaccgccttcttctacttcatg 10574 Score = 83.8 bits (42), Expect = 8e-13 Identities = 101/120 (84%), Gaps = 8/120 (6%) Strand = Plus / Plus Query: 445 aggaaagcggtgaattgtctgaggaatcagattacgactagaagtgaacattg---tgtt 501 ||||||||||||||||||| |||||||||||||||||||||| |||||| | | ||| Sbjct: 13399 aggaaagcggtgaattgtccgaggaatcagattacgactagaggtgaacgtcgggtagtt 13458 Query: 502 gttctgatggttcacc-----aactggatgaaccaattaattgtgtattacagaactgag 556 |||| ||||||||||| || |||||| || ||| |||||| ||||||||||||||| Sbjct: 13459 gttccgatggttcacccaagtaattggatggacgaatcaattgtatattacagaactgag 13518