BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst012h24
         (939 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NM_001073703.1| Oryza sativa (japonica cultivar-group) Os12g...   186   1e-43
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...   168   3e-38
emb|AL831797.4|CNS08CAA Oryza sativa chromosome 12, . BAC OSJNBa...   168   3e-38
gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence      105   3e-19

>ref|NM_001073703.1| Oryza sativa (japonica cultivar-group) Os12g0592200 (Os12g0592200)
           mRNA, complete cds
          Length = 309

 Score =  186 bits (94), Expect = 1e-43
 Identities = 112/118 (94%)
 Strand = Plus / Plus

                                                                       
Query: 351 cggccgcacggccgctggctgcgatgatggggtcgccgttgacggcggcggcggtgctgg 410
           ||||||||||||||||||| |||||||||||||||||| ||||| |||||||| ||||||
Sbjct: 158 cggccgcacggccgctggcggcgatgatggggtcgccgctgacgacggcggcgttgctgg 217

                                                                     
Query: 411 ctcggctgacggcgcacccggcggccagcgcgcgggcgtgctgcgagctctcccaggg 468
           | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 218 cgcggctgacggcgcacccggcggccagcgcgcgggcctgctgcgagctctcccaggg 275



 Score = 99.6 bits (50), Expect = 2e-17
 Identities = 59/62 (95%)
 Strand = Plus / Plus

                                                                       
Query: 200 atggcgtggcgcggcgtcgcctcccgcaccgtcctcgccgccgtccgccgcccggcgccc 259
           |||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 1   atggcgtggcgcggcgccgcctcccgcaccgtcctcgcggccgtccgccgcccggggccc 60

             
Query: 260 tc 261
           ||
Sbjct: 61  tc 62


>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score =  168 bits (85), Expect = 3e-38
 Identities = 103/109 (94%)
 Strand = Plus / Plus

                                                                            
Query: 360      ggccgctggctgcgatgatggggtcgccgttgacggcggcggcggtgctggctcggctga 419
                |||||||||| |||||||||||||||||| ||||| |||||||| ||||||| |||||||
Sbjct: 24849213 ggccgctggcggcgatgatggggtcgccgctgacgacggcggcgttgctggcgcggctga 24849272

                                                                 
Query: 420      cggcgcacccggcggccagcgcgcgggcgtgctgcgagctctcccaggg 468
                |||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 24849273 cggcgcacccggcggccagcgcgcgggcctgctgcgagctctcccaggg 24849321



 Score =  125 bits (63), Expect = 3e-25
 Identities = 150/175 (85%), Gaps = 8/175 (4%)
 Strand = Plus / Plus

                                                                            
Query: 535      gtacttgaagttaccatgtggattcatttgtcctttggaaaaggatacaactcttcttgg 594
                ||||||||||||||||||| |||||| | |||||||| ||||||||||||||||||||||
Sbjct: 24850711 gtacttgaagttaccatgtagattcact-gtcctttg-aaaaggatacaactcttcttgg 24850768

                                                                            
Query: 595      atgcgtctttggggaagctattctggcgtttcatccttttaactgcaaagttagaagaat 654
                |||||||||| || | ||| |||||| ||||    |  |||||| |||||||||||||| 
Sbjct: 24850769 atgcgtcttttggaaggctgttctggtgttt----cgattaacttcaaagttagaagaaa 24850824

                                                                       
Query: 655      ttctccagcagtagctcgtctctcaaagtttctagcctagacagataaataattt 709
                 |||||||   |||||||  |||||||||||||||| |||||||| |||||||||
Sbjct: 24850825 ctctccagtgatagctcg--tctcaaagtttctagcttagacagagaaataattt 24850877



 Score =  121 bits (61), Expect = 5e-24
 Identities = 70/73 (95%)
 Strand = Plus / Plus

                                                                            
Query: 189      aaaccctagccatggcgtggcgcggcgtcgcctcccgcaccgtcctcgccgccgtccgcc 248
                ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 24848936 aaaccctagccatggcgtggcgcggcgccgcctcccgcaccgtcctcgcggccgtccgcc 24848995

                             
Query: 249      gcccggcgccctc 261
                |||||| ||||||
Sbjct: 24848996 gcccggggccctc 24849008


>emb|AL831797.4|CNS08CAA Oryza sativa chromosome 12, . BAC OSJNBa0010M16 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 132741

 Score =  168 bits (85), Expect = 3e-38
 Identities = 103/109 (94%)
 Strand = Plus / Minus

                                                                          
Query: 360    ggccgctggctgcgatgatggggtcgccgttgacggcggcggcggtgctggctcggctga 419
              |||||||||| |||||||||||||||||| ||||| |||||||| ||||||| |||||||
Sbjct: 115655 ggccgctggcggcgatgatggggtcgccgctgacgacggcggcgttgctggcgcggctga 115596

                                                               
Query: 420    cggcgcacccggcggccagcgcgcgggcgtgctgcgagctctcccaggg 468
              |||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 115595 cggcgcacccggcggccagcgcgcgggcctgctgcgagctctcccaggg 115547



 Score =  125 bits (63), Expect = 3e-25
 Identities = 150/175 (85%), Gaps = 8/175 (4%)
 Strand = Plus / Minus

                                                                          
Query: 535    gtacttgaagttaccatgtggattcatttgtcctttggaaaaggatacaactcttcttgg 594
              ||||||||||||||||||| |||||| | |||||||| ||||||||||||||||||||||
Sbjct: 114157 gtacttgaagttaccatgtagattcact-gtcctttg-aaaaggatacaactcttcttgg 114100

                                                                          
Query: 595    atgcgtctttggggaagctattctggcgtttcatccttttaactgcaaagttagaagaat 654
              |||||||||| || | ||| |||||| ||||    |  |||||| |||||||||||||| 
Sbjct: 114099 atgcgtcttttggaaggctgttctggtgttt----cgattaacttcaaagttagaagaaa 114044

                                                                     
Query: 655    ttctccagcagtagctcgtctctcaaagtttctagcctagacagataaataattt 709
               |||||||   |||||||  |||||||||||||||| |||||||| |||||||||
Sbjct: 114043 ctctccagtgatagctcg--tctcaaagtttctagcttagacagagaaataattt 113991



 Score =  121 bits (61), Expect = 5e-24
 Identities = 70/73 (95%)
 Strand = Plus / Minus

                                                                          
Query: 189    aaaccctagccatggcgtggcgcggcgtcgcctcccgcaccgtcctcgccgccgtccgcc 248
              ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 115932 aaaccctagccatggcgtggcgcggcgccgcctcccgcaccgtcctcgcggccgtccgcc 115873

                           
Query: 249    gcccggcgccctc 261
              |||||| ||||||
Sbjct: 115872 gcccggggccctc 115860


>gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence
          Length = 204120

 Score =  105 bits (53), Expect = 3e-19
 Identities = 95/109 (87%)
 Strand = Plus / Minus

                                                                          
Query: 360    ggccgctggctgcgatgatggggtcgccgttgacggcggcggcggtgctggctcggctga 419
              |||| ||||| ||| |||||||||| ||| |||||| ||| |||||| |||| || || |
Sbjct: 179608 ggcctctggcggcgttgatggggtccccggtgacggtggccgcggtgatggcgcgtctca 179549

                                                               
Query: 420    cggcgcacccggcggccagcgcgcgggcgtgctgcgagctctcccaggg 468
              |||||||||| |  |||||||||||||||||||||||||||||||||||
Sbjct: 179548 cggcgcaccccggtgccagcgcgcgggcgtgctgcgagctctcccaggg 179500