BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst012h21 (980 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001051628.1| Oryza sativa (japonica cultivar-group) Os01g... 170 7e-39 dbj|AK240683.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 163 2e-36 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 98 8e-17 dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic D... 98 8e-17 dbj|AP003418.2| Oryza sativa (japonica cultivar-group) genomic D... 98 8e-17 >ref|NM_001051628.1| Oryza sativa (japonica cultivar-group) Os01g0898400 (Os01g0898400) mRNA, complete cds Length = 795 Score = 170 bits (86), Expect = 7e-39 Identities = 199/236 (84%), Gaps = 3/236 (1%) Strand = Plus / Plus Query: 221 ggagggaaggctactgcagcaggaagcgtggggggatca---aagaatgtggtgaagcct 277 |||||||| ||||||||||||| || || |||||||| |||||| ||||||||||| Sbjct: 343 ggagggaaagctactgcagcagccagtgttgggggatctggtaagaatctggtgaagcct 402 Query: 278 ggctatcttagtgatgaggagtggatgaagtgttgcgagtgggctaagggtggaattgaa 337 |||| || || |||||||| |||||||| || ||||||||||| |||| ||| ||||| Sbjct: 403 agctacctgagcgatgaggattggatgaaatgctgcgagtgggcgaaggatggggttgaa 462 Query: 338 attgccagttacacgggaaatgatatgcagaaactgatcggcgataagcgagaagagcgc 397 | |||||||| || || || ||||||||||||||| || | ||||||| ||||||||| Sbjct: 463 actgccagttttactgggaacgatatgcagaaactgctcagtgataagctggaagagcgc 522 Query: 398 atacggaagaaggtggagaaggcaatgggcactttgcagctctccatggacagtct 453 |||| |||||||||||||||||||||||| || |||| ||||||||||||||||| Sbjct: 523 atacagaagaaggtggagaaggcaatggggacgatgcaactctccatggacagtct 578 Score = 103 bits (52), Expect = 1e-18 Identities = 73/80 (91%) Strand = Plus / Plus Query: 49 gatggcttcgcgggctccaatcatcatccaaaacgagaacttaccgatctttcgaggcat 108 |||||||||||||||||||||| |||||||||||||||| | ||||||||||| || || Sbjct: 180 gatggcttcgcgggctccaatcgccatccaaaacgagaacctgccgatctttcgcgggat 239 Query: 109 tgatggcaagaaggccgggg 128 ||||||||||||||||||| Sbjct: 240 cgatggcaagaaggccgggg 259 Score = 97.6 bits (49), Expect = 8e-17 Identities = 139/169 (82%) Strand = Plus / Plus Query: 483 tggtggatccagatgataaagcaaaattggagcttgatcctgagtttctgccttcaacga 542 |||||||||| || |||||| || || |||| |||||| | || ||||| ||| ||| | Sbjct: 611 tggtggatcctgaagataaaacagaactggatcttgatacagaatttcttcctccaatgt 670 Query: 543 cacacttaagctcaagaataggtgaacaagatgccaactatctcctttctgacttggaaa 602 || |||||||||||||| |||||||||| | ||||| || | ||||||||||||||| Sbjct: 671 catacttaagctcaagactaggtgaacacaacgccaatcatgttctttctgacttggaat 730 Query: 603 ttgaacacgaaccatttgcttattgcagtttcgacctgaagctcaagga 651 | ||||| ||| |||||||| |||||| ||| ||| ||||||||||||| Sbjct: 731 tcgaacatgaaacatttgctaattgcaatttagacttgaagctcaagga 779 >dbj|AK240683.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J043001N02, full insert sequence Length = 916 Score = 163 bits (82), Expect = 2e-36 Identities = 198/236 (83%), Gaps = 3/236 (1%) Strand = Plus / Plus Query: 221 ggagggaaggctactgcagcaggaagcgtggggggatca---aagaatgtggtgaagcct 277 |||||||| ||||||||||||| || || |||||||| |||||| ||||||||||| Sbjct: 191 ggagggaaagctactgcagcagccagtgttgggggatctggtaagaatctggtgaagcct 250 Query: 278 ggctatcttagtgatgaggagtggatgaagtgttgcgagtgggctaagggtggaattgaa 337 |||| || || ||||| || |||||||| || ||||||||||| |||| ||| ||||| Sbjct: 251 agctacctgagcgatgacgattggatgaaatgctgcgagtgggcgaaggatggggttgaa 310 Query: 338 attgccagttacacgggaaatgatatgcagaaactgatcggcgataagcgagaagagcgc 397 | |||||||| || || || ||||||||||||||| || | ||||||| ||||||||| Sbjct: 311 actgccagttttactgggaacgatatgcagaaactgctcagtgataagctggaagagcgc 370 Query: 398 atacggaagaaggtggagaaggcaatgggcactttgcagctctccatggacagtct 453 |||| |||||||||||||||||||||||| || |||| ||||||||||||||||| Sbjct: 371 atacagaagaaggtggagaaggcaatggggacgatgcaactctccatggacagtct 426 Score = 103 bits (52), Expect = 1e-18 Identities = 73/80 (91%) Strand = Plus / Plus Query: 49 gatggcttcgcgggctccaatcatcatccaaaacgagaacttaccgatctttcgaggcat 108 |||||||||||||||||||||| |||||||||||||||| | ||||||||||| || || Sbjct: 28 gatggcttcgcgggctccaatcgccatccaaaacgagaacctgccgatctttcgcgggat 87 Query: 109 tgatggcaagaaggccgggg 128 ||||||||||||||||||| Sbjct: 88 cgatggcaagaaggccgggg 107 Score = 97.6 bits (49), Expect = 8e-17 Identities = 139/169 (82%) Strand = Plus / Plus Query: 483 tggtggatccagatgataaagcaaaattggagcttgatcctgagtttctgccttcaacga 542 |||||||||| || |||||| || || |||| |||||| | || ||||| ||| ||| | Sbjct: 459 tggtggatcctgaagataaaacagaactggatcttgatacagaatttcttcctccaatgt 518 Query: 543 cacacttaagctcaagaataggtgaacaagatgccaactatctcctttctgacttggaaa 602 || |||||||||||||| |||||||||| | ||||| || | ||||||||||||||| Sbjct: 519 catacttaagctcaagactaggtgaacacaacgccaatcatgttctttctgacttggaat 578 Query: 603 ttgaacacgaaccatttgcttattgcagtttcgacctgaagctcaagga 651 | ||||| ||| |||||||| |||||| ||| ||| ||||||||||||| Sbjct: 579 tcgaacatgaaacatttgctaattgcaatttagacttgaagctcaagga 627 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 97.6 bits (49), Expect = 8e-17 Identities = 147/179 (82%), Gaps = 3/179 (1%) Strand = Plus / Plus Query: 221 ggagggaaggctactgcagcaggaagcgtggggggatca---aagaatgtggtgaagcct 277 |||||||| ||||||||||||| || || |||||||| |||||| ||||||||||| Sbjct: 39057214 ggagggaaagctactgcagcagccagtgttgggggatctggtaagaatctggtgaagcct 39057273 Query: 278 ggctatcttagtgatgaggagtggatgaagtgttgcgagtgggctaagggtggaattgaa 337 |||| || || |||||||| |||||||| || ||||||||||| |||| ||| ||||| Sbjct: 39057274 agctacctgagcgatgaggattggatgaaatgctgcgagtgggcgaaggatggggttgaa 39057333 Query: 338 attgccagttacacgggaaatgatatgcagaaactgatcggcgataagcgagaagagcg 396 | |||||||| || || || ||||||||||||||| || | ||||||| |||||||| Sbjct: 39057334 actgccagttttactgggaacgatatgcagaaactgctcagtgataagctggaagagcg 39057392 >dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0674H09 Length = 142955 Score = 97.6 bits (49), Expect = 8e-17 Identities = 147/179 (82%), Gaps = 3/179 (1%) Strand = Plus / Plus Query: 221 ggagggaaggctactgcagcaggaagcgtggggggatca---aagaatgtggtgaagcct 277 |||||||| ||||||||||||| || || |||||||| |||||| ||||||||||| Sbjct: 130847 ggagggaaagctactgcagcagccagtgttgggggatctggtaagaatctggtgaagcct 130906 Query: 278 ggctatcttagtgatgaggagtggatgaagtgttgcgagtgggctaagggtggaattgaa 337 |||| || || |||||||| |||||||| || ||||||||||| |||| ||| ||||| Sbjct: 130907 agctacctgagcgatgaggattggatgaaatgctgcgagtgggcgaaggatggggttgaa 130966 Query: 338 attgccagttacacgggaaatgatatgcagaaactgatcggcgataagcgagaagagcg 396 | |||||||| || || || ||||||||||||||| || | ||||||| |||||||| Sbjct: 130967 actgccagttttactgggaacgatatgcagaaactgctcagtgataagctggaagagcg 131025 >dbj|AP003418.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506A10 Length = 145265 Score = 97.6 bits (49), Expect = 8e-17 Identities = 147/179 (82%), Gaps = 3/179 (1%) Strand = Plus / Plus Query: 221 ggagggaaggctactgcagcaggaagcgtggggggatca---aagaatgtggtgaagcct 277 |||||||| ||||||||||||| || || |||||||| |||||| ||||||||||| Sbjct: 75194 ggagggaaagctactgcagcagccagtgttgggggatctggtaagaatctggtgaagcct 75253 Query: 278 ggctatcttagtgatgaggagtggatgaagtgttgcgagtgggctaagggtggaattgaa 337 |||| || || |||||||| |||||||| || ||||||||||| |||| ||| ||||| Sbjct: 75254 agctacctgagcgatgaggattggatgaaatgctgcgagtgggcgaaggatggggttgaa 75313 Query: 338 attgccagttacacgggaaatgatatgcagaaactgatcggcgataagcgagaagagcg 396 | |||||||| || || || ||||||||||||||| || | ||||||| |||||||| Sbjct: 75314 actgccagttttactgggaacgatatgcagaaactgctcagtgataagctggaagagcg 75372