BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst012h13 (886 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT833086.1| Oryza sativa (indica cultivar-group) cDNA clone:... 262 2e-66 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 254 5e-64 emb|AL606657.4|OSJN00101 Oryza sativa genomic DNA, chromosome 4,... 254 5e-64 ref|NM_001060556.1| Oryza sativa (japonica cultivar-group) Os04g... 248 3e-62 emb|CT833087.1| Oryza sativa (indica cultivar-group) cDNA clone:... 240 8e-60 >emb|CT833086.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA110G20, full insert sequence Length = 1513 Score = 262 bits (132), Expect = 2e-66 Identities = 302/356 (84%), Gaps = 17/356 (4%) Strand = Plus / Plus Query: 547 ggagtagaagaggaggaagatgaccaggacaacgaggacgagggggaagatgatgatgaa 606 |||||||| ||||| || || || |||||||| ||||| || | |||||||||||||||| Sbjct: 1159 ggagtagatgaggaagaggaagatcaggacaatgaggatgatgaggaagatgatgatgaa 1218 Query: 607 gactcactccagcccccaaagaagaggaagaagtgaagctcttc-tgcggctttagttac 665 |||||||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||| Sbjct: 1219 gactcacttcagcccccaaagaagaggaagaagtgaatatcttcatgcggctatagttac 1278 Query: 666 ca--------tgcgctgagccgtggatagttttcgtcatgttctcggaatcgaacttgcc 717 || |||||||||| ||| | ||||||||||||||||||||||||||||||| Sbjct: 1279 caacttaccatgcgctgagctgtgcttggttttcgtcatgttctcggaatcgaacttgca 1338 Query: 718 ttttagagt------aaaaaggctccacacgatcagtacgtgtgggcttgtaggagcttt 771 || |||| |||| ||||||||||| ||||||||||||| ||||||||||||| Sbjct: 1339 ttagggagttaagaaaaaagggctccacacgttcagtacgtgtggatttgtaggagcttt 1398 Query: 772 atgatttgaagcaattggagagaactct-atgccatcggtacttgcttctgtggagttga 830 ||||||| |||||||| || |||||||| || ||| | | ||||||||||||||||||| Sbjct: 1399 atgatttcaagcaattagacagaactctgttgtcattgttgcttgcttctgtggagttga 1458 Query: 831 acagatgtttcgctaacataattcggccctgagtggtgaaagcctcgagattgaat 886 |||||||||||||||||||||||| | ||||| |||||||||||| ||||||||| Sbjct: 1459 acagatgtttcgctaacataattc-gacctgaatggtgaaagcctgaagattgaat 1513 Score = 212 bits (107), Expect = 2e-51 Identities = 244/289 (84%), Gaps = 3/289 (1%) Strand = Plus / Plus Query: 179 ccgtcgccgccgagggtcctatctgtgatatgcctgacttcaagatgggtggaaagaaga 238 |||| ||| ||||||||||| | | ||||||||||||||||||||||||||| ||||||| Sbjct: 812 ccgtagccaccgagggtcctgtatttgatatgcctgacttcaagatgggtgggaagaaga 871 Query: 239 gtggtgactctactcctactgatgctggcgatgaagatggtggtggtgatgacggggatg 298 ||| ||| || |||| |||||||| || |||||||||||||||| |||||||||||| | Sbjct: 872 gtgatgatgctgctcccactgatgccggggatgaagatggtggtgatgatgacggggacg 931 Query: 299 aagatggtgactttggggagggtgaagaggacatctcggaaggagaggcgtatgaaaatc 358 | ||||||||||||||||| || ||||||||| | || ||||| |||| ||||| |||| Sbjct: 932 aggatggtgactttggggaaggcgaagaggacgtttcagaaggtgagggatatgataatc 991 Query: 359 ctaagggtaatgataacaataagaaacaaagaggtgagggtgaggagaacggcgaggagg 418 | || || | |||||||| |||| ||||||||||| |||||| || || ||||||| Sbjct: 992 caaaaggcatcgataacaacaaga---aaagaggtgagcctgaggaaaatggtgaggagg 1048 Query: 419 atgaggaagaacatgaagatccggagggtggtggaggtgatgatgacga 467 |||||||||| | ||||| | ||||||||||||||||||||| ||||| Sbjct: 1049 atgaggaagagcctgaaggccaggagggtggtggaggtgatgacgacga 1097 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 254 bits (128), Expect = 5e-64 Identities = 301/356 (84%), Gaps = 17/356 (4%) Strand = Plus / Minus Query: 547 ggagtagaagaggaggaagatgaccaggacaacgaggacgagggggaagatgatgatgaa 606 |||||||| ||||| || || || |||||||| ||||| || | |||||||||||||||| Sbjct: 32418251 ggagtagatgaggaagaggaagatcaggacaatgaggatgatgaggaagatgatgatgaa 32418192 Query: 607 gactcactccagcccccaaagaagaggaagaagtgaagctcttc-tgcggctttagttac 665 |||||||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||| Sbjct: 32418191 gactcacttcagcccccaaagaagaggaagaagtgaatatcttcatgcggctatagttac 32418132 Query: 666 ca--------tgcgctgagccgtggatagttttcgtcatgttctcggaatcgaacttgcc 717 || |||||||||| ||| | ||||||||||||||||||||||||||||||| Sbjct: 32418131 caacttaccatgcgctgagctgtgcttggttttcgtcatgttctcggaatcgaacttgca 32418072 Query: 718 ttttagagt------aaaaaggctccacacgatcagtacgtgtgggcttgtaggagcttt 771 || |||| |||| ||||||||||| |||||| |||||| ||||||||||||| Sbjct: 32418071 ttagggagttaagaaaaaagggctccacacgttcagtaagtgtggatttgtaggagcttt 32418012 Query: 772 atgatttgaagcaattggagagaactctat-gccatcggtacttgcttctgtggagttga 830 ||||||| |||||||| || |||||||| | | ||| | | ||||||||||||||||||| Sbjct: 32418011 atgatttcaagcaattagacagaactctgttgtcattgttgcttgcttctgtggagttga 32417952 Query: 831 acagatgtttcgctaacataattcggccctgagtggtgaaagcctcgagattgaat 886 |||||||||||||||||||||||| | ||||| |||||||||||| ||||||||| Sbjct: 32417951 acagatgtttcgctaacataattc-gacctgaatggtgaaagcctgaagattgaat 32417897 Score = 208 bits (105), Expect = 3e-50 Identities = 239/283 (84%), Gaps = 3/283 (1%) Strand = Plus / Minus Query: 191 agggtcctatctgtgatatgcctgacttcaagatgggtggaaagaagagtggtgactcta 250 |||||||| | | ||||||||||||||||||||||||||| |||||||||| ||| || Sbjct: 32418586 agggtcctgtatttgatatgcctgacttcaagatgggtgggaagaagagtgatgatgctg 32418527 Query: 251 ctcctactgatgctggcgatgaagatggtggtggtgatgacggggatgaagatggtgact 310 |||| |||||||| || |||||||||||||||| |||||||||||| || |||||||||| Sbjct: 32418526 ctcccactgatgccggggatgaagatggtggtgatgatgacggggacgaggatggtgact 32418467 Query: 311 ttggggagggtgaagaggacatctcggaaggagaggcgtatgaaaatcctaagggtaatg 370 ||||||| || ||||||||| | || ||||| |||| ||||| ||||| || || | | Sbjct: 32418466 ttggggaaggcgaagaggacgtttcagaaggtgagggatatgataatccaaaaggcatcg 32418407 Query: 371 ataacaataagaaacaaagaggtgagggtgaggagaacggcgaggaggatgaggaagaac 430 ||||||| |||| ||||||||||| |||||| || || ||||||||||||||||| | Sbjct: 32418406 ataacaacaaga---aaagaggtgagcctgaggaaaatggtgaggaggatgaggaagagc 32418350 Query: 431 atgaagatccggagggtggtggaggtgatgatgacgacgacga 473 ||||| | ||||||||||||||||||||| ||||| ||||| Sbjct: 32418349 ctgaaggccaggagggtggtggaggtgatgacgacgatgacga 32418307 >emb|AL606657.4|OSJN00101 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0034I13, complete sequence Length = 123480 Score = 254 bits (128), Expect = 5e-64 Identities = 301/356 (84%), Gaps = 17/356 (4%) Strand = Plus / Minus Query: 547 ggagtagaagaggaggaagatgaccaggacaacgaggacgagggggaagatgatgatgaa 606 |||||||| ||||| || || || |||||||| ||||| || | |||||||||||||||| Sbjct: 35052 ggagtagatgaggaagaggaagatcaggacaatgaggatgatgaggaagatgatgatgaa 34993 Query: 607 gactcactccagcccccaaagaagaggaagaagtgaagctcttc-tgcggctttagttac 665 |||||||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||| Sbjct: 34992 gactcacttcagcccccaaagaagaggaagaagtgaatatcttcatgcggctatagttac 34933 Query: 666 ca--------tgcgctgagccgtggatagttttcgtcatgttctcggaatcgaacttgcc 717 || |||||||||| ||| | ||||||||||||||||||||||||||||||| Sbjct: 34932 caacttaccatgcgctgagctgtgcttggttttcgtcatgttctcggaatcgaacttgca 34873 Query: 718 ttttagagt------aaaaaggctccacacgatcagtacgtgtgggcttgtaggagcttt 771 || |||| |||| ||||||||||| |||||| |||||| ||||||||||||| Sbjct: 34872 ttagggagttaagaaaaaagggctccacacgttcagtaagtgtggatttgtaggagcttt 34813 Query: 772 atgatttgaagcaattggagagaactctat-gccatcggtacttgcttctgtggagttga 830 ||||||| |||||||| || |||||||| | | ||| | | ||||||||||||||||||| Sbjct: 34812 atgatttcaagcaattagacagaactctgttgtcattgttgcttgcttctgtggagttga 34753 Query: 831 acagatgtttcgctaacataattcggccctgagtggtgaaagcctcgagattgaat 886 |||||||||||||||||||||||| | ||||| |||||||||||| ||||||||| Sbjct: 34752 acagatgtttcgctaacataattc-gacctgaatggtgaaagcctgaagattgaat 34698 Score = 208 bits (105), Expect = 3e-50 Identities = 239/283 (84%), Gaps = 3/283 (1%) Strand = Plus / Minus Query: 191 agggtcctatctgtgatatgcctgacttcaagatgggtggaaagaagagtggtgactcta 250 |||||||| | | ||||||||||||||||||||||||||| |||||||||| ||| || Sbjct: 35387 agggtcctgtatttgatatgcctgacttcaagatgggtgggaagaagagtgatgatgctg 35328 Query: 251 ctcctactgatgctggcgatgaagatggtggtggtgatgacggggatgaagatggtgact 310 |||| |||||||| || |||||||||||||||| |||||||||||| || |||||||||| Sbjct: 35327 ctcccactgatgccggggatgaagatggtggtgatgatgacggggacgaggatggtgact 35268 Query: 311 ttggggagggtgaagaggacatctcggaaggagaggcgtatgaaaatcctaagggtaatg 370 ||||||| || ||||||||| | || ||||| |||| ||||| ||||| || || | | Sbjct: 35267 ttggggaaggcgaagaggacgtttcagaaggtgagggatatgataatccaaaaggcatcg 35208 Query: 371 ataacaataagaaacaaagaggtgagggtgaggagaacggcgaggaggatgaggaagaac 430 ||||||| |||| ||||||||||| |||||| || || ||||||||||||||||| | Sbjct: 35207 ataacaacaaga---aaagaggtgagcctgaggaaaatggtgaggaggatgaggaagagc 35151 Query: 431 atgaagatccggagggtggtggaggtgatgatgacgacgacga 473 ||||| | ||||||||||||||||||||| ||||| ||||| Sbjct: 35150 ctgaaggccaggagggtggtggaggtgatgacgacgatgacga 35108 >ref|NM_001060556.1| Oryza sativa (japonica cultivar-group) Os04g0636800 (Os04g0636800) mRNA, partial cds Length = 928 Score = 248 bits (125), Expect = 3e-62 Identities = 292/345 (84%), Gaps = 17/345 (4%) Strand = Plus / Plus Query: 547 ggagtagaagaggaggaagatgaccaggacaacgaggacgagggggaagatgatgatgaa 606 |||||||| ||||| || || || |||||||| ||||| || | |||||||||||||||| Sbjct: 577 ggagtagatgaggaagaggaagatcaggacaatgaggatgatgaggaagatgatgatgaa 636 Query: 607 gactcactccagcccccaaagaagaggaagaagtgaagctcttc-tgcggctttagttac 665 |||||||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||| Sbjct: 637 gactcacttcagcccccaaagaagaggaagaagtgaatatcttcatgcggctatagttac 696 Query: 666 ca--------tgcgctgagccgtggatagttttcgtcatgttctcggaatcgaacttgcc 717 || |||||||||| ||| | ||||||||||||||||||||||||||||||| Sbjct: 697 caacttaccatgcgctgagctgtgcttggttttcgtcatgttctcggaatcgaacttgca 756 Query: 718 ttttagagt------aaaaaggctccacacgatcagtacgtgtgggcttgtaggagcttt 771 || |||| |||| ||||||||||| |||||| |||||| ||||||||||||| Sbjct: 757 ttagggagttaagaaaaaagggctccacacgttcagtaagtgtggatttgtaggagcttt 816 Query: 772 atgatttgaagcaattggagagaactctat-gccatcggtacttgcttctgtggagttga 830 ||||||| |||||||| || |||||||| | | ||| | | ||||||||||||||||||| Sbjct: 817 atgatttcaagcaattagacagaactctgttgtcattgttgcttgcttctgtggagttga 876 Query: 831 acagatgtttcgctaacataattcggccctgagtggtgaaagcct 875 |||||||||||||||||||||||| | ||||| |||||||||||| Sbjct: 877 acagatgtttcgctaacataattc-gacctgaatggtgaaagcct 920 Score = 216 bits (109), Expect = 1e-52 Identities = 249/295 (84%), Gaps = 3/295 (1%) Strand = Plus / Plus Query: 179 ccgtcgccgccgagggtcctatctgtgatatgcctgacttcaagatgggtggaaagaaga 238 |||| ||| ||||||||||| | | ||||||||||||||||||||||||||| ||||||| Sbjct: 230 ccgtagccaccgagggtcctgtatttgatatgcctgacttcaagatgggtgggaagaaga 289 Query: 239 gtggtgactctactcctactgatgctggcgatgaagatggtggtggtgatgacggggatg 298 ||| ||| || |||| |||||||| || |||||||||||||||| |||||||||||| | Sbjct: 290 gtgatgatgctgctcccactgatgccggggatgaagatggtggtgatgatgacggggacg 349 Query: 299 aagatggtgactttggggagggtgaagaggacatctcggaaggagaggcgtatgaaaatc 358 | ||||||||||||||||| || ||||||||| | || ||||| |||| ||||| |||| Sbjct: 350 aggatggtgactttggggaaggcgaagaggacgtttcagaaggtgagggatatgataatc 409 Query: 359 ctaagggtaatgataacaataagaaacaaagaggtgagggtgaggagaacggcgaggagg 418 | || || | |||||||| |||| ||||||||||| |||||| || || ||||||| Sbjct: 410 caaaaggcatcgataacaacaaga---aaagaggtgagcctgaggaaaatggtgaggagg 466 Query: 419 atgaggaagaacatgaagatccggagggtggtggaggtgatgatgacgacgacga 473 |||||||||| | ||||| | ||||||||||||||||||||| ||||| ||||| Sbjct: 467 atgaggaagagcctgaaggccaggagggtggtggaggtgatgacgacgatgacga 521 >emb|CT833087.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA111C11, full insert sequence Length = 953 Score = 240 bits (121), Expect = 8e-60 Identities = 292/345 (84%), Gaps = 18/345 (5%) Strand = Plus / Plus Query: 547 ggagtagaagaggaggaagatgaccaggacaacgaggacgagggggaagatgatgatgaa 606 |||||||| ||||| || || || |||||||| ||||| || | |||||||||||||||| Sbjct: 600 ggagtagatgaggaagaggaagatcaggacaatgaggatgatgaggaagatgatgatgaa 659 Query: 607 gactcactccagcccccaaagaagaggaagaagtgaagctcttc-tgcggctttagttac 665 |||||||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||| Sbjct: 660 gactcacttcagcccccaaagaagaggaagaagtgaatatcttcatgcggctatagttac 719 Query: 666 ca--------tgcgctgagccgtggatagttttcgtcatgttctcggaatcgaacttgcc 717 || |||||||||| ||| | |||||||||||||||||||||| |||||||| Sbjct: 720 caacttaccatgcgctgagctgtgcttggttttcgtcatgttctcggaat-gaacttgca 778 Query: 718 ttttagagt------aaaaaggctccacacgatcagtacgtgtgggcttgtaggagcttt 771 || |||| |||| ||||||||||| ||||||||||||| ||||||||||||| Sbjct: 779 ttagggagttaagaaaaaagggctccacacgttcagtacgtgtggatttgtaggagcttt 838 Query: 772 atgatttgaagcaattggagagaactct-atgccatcggtacttgcttctgtggagttga 830 ||||||| |||||||| || |||||||| || ||| | | ||||||||||||||||||| Sbjct: 839 atgatttcaagcaattagacagaactctgttgtcattgttgcttgcttctgtggagttga 898 Query: 831 acagatgtttcgctaacataattcggccctgagtggtgaaagcct 875 |||||||||||||||||||||||| | ||||| |||||||||||| Sbjct: 899 acagatgtttcgctaacataattc-gacctgaatggtgaaagcct 942 Score = 212 bits (107), Expect = 2e-51 Identities = 244/289 (84%), Gaps = 3/289 (1%) Strand = Plus / Plus Query: 179 ccgtcgccgccgagggtcctatctgtgatatgcctgacttcaagatgggtggaaagaaga 238 |||| ||| ||||||||||| | | ||||||||||||||||||||||||||| ||||||| Sbjct: 253 ccgtagccaccgagggtcctgtatttgatatgcctgacttcaagatgggtgggaagaaga 312 Query: 239 gtggtgactctactcctactgatgctggcgatgaagatggtggtggtgatgacggggatg 298 ||| ||| || |||| |||||||| || |||||||||||||||| |||||||||||| | Sbjct: 313 gtgatgatgctgctcccactgatgccggggatgaagatggtggtgatgatgacggggacg 372 Query: 299 aagatggtgactttggggagggtgaagaggacatctcggaaggagaggcgtatgaaaatc 358 | ||||||||||||||||| || ||||||||| | || ||||| |||| ||||| |||| Sbjct: 373 aggatggtgactttggggaaggcgaagaggacgtttcagaaggtgagggatatgataatc 432 Query: 359 ctaagggtaatgataacaataagaaacaaagaggtgagggtgaggagaacggcgaggagg 418 | || || | |||||||| |||| ||||||||||| |||||| || || ||||||| Sbjct: 433 caaaaggcatcgataacaacaaga---aaagaggtgagcctgaggaaaatggtgaggagg 489 Query: 419 atgaggaagaacatgaagatccggagggtggtggaggtgatgatgacga 467 |||||||||| | ||||| | ||||||||||||||||||||| ||||| Sbjct: 490 atgaggaagagcctgaaggccaggagggtggtggaggtgatgacgacga 538