BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst012h11
         (868 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NM_001073818.1| Oryza sativa (japonica cultivar-group) Os12g...   228   3e-56
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...   228   3e-56
emb|AL731885.4|CNS08C8P Oryza sativa chromosome 12, . BAC OSJNBb...   228   3e-56
emb|BX000457.2|CNS08CDE Oryza sativa chromosome 12, . BAC OJ1388...   228   3e-56
gb|AY022422.1| Oryza sativa microsatellite MRG4747 containing (A...   145   3e-31

>ref|NM_001073818.1| Oryza sativa (japonica cultivar-group) Os12g0617000 (Os12g0617000)
           mRNA, complete cds
          Length = 633

 Score =  228 bits (115), Expect = 3e-56
 Identities = 127/131 (96%)
 Strand = Plus / Plus

                                                                       
Query: 284 ggtggcggtgtgaggctcttcccttgcctcttctgcaacaagaagttcctcaagtcgcag 343
           ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 199 ggtggtggtgtgaggctcttcccttgcctcttctgcaacaagaagtttctcaagtcgcag 258

                                                                       
Query: 344 gcgctagggggacaccagaatgcacacaagaaggagaggagcgtggggtggaacgcccac 403
           |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 259 gcgctagggggacaccagaatgcacacaagaaggagaggagcgtcgggtggaacacccac 318

                      
Query: 404 ctctacctccc 414
           |||||||||||
Sbjct: 319 ctctacctccc 329


>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score =  228 bits (115), Expect = 3e-56
 Identities = 127/131 (96%)
 Strand = Plus / Minus

                                                                            
Query: 284      ggtggcggtgtgaggctcttcccttgcctcttctgcaacaagaagttcctcaagtcgcag 343
                ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 26245101 ggtggtggtgtgaggctcttcccttgcctcttctgcaacaagaagtttctcaagtcgcag 26245042

                                                                            
Query: 344      gcgctagggggacaccagaatgcacacaagaaggagaggagcgtggggtggaacgcccac 403
                |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 26245041 gcgctagggggacaccagaatgcacacaagaaggagaggagcgtcgggtggaacacccac 26244982

                           
Query: 404      ctctacctccc 414
                |||||||||||
Sbjct: 26244981 ctctacctccc 26244971


>emb|AL731885.4|CNS08C8P Oryza sativa chromosome 12, . BAC OSJNBb0016A10 of library OSJNBb
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 133978

 Score =  228 bits (115), Expect = 3e-56
 Identities = 127/131 (96%)
 Strand = Plus / Minus

                                                                        
Query: 284  ggtggcggtgtgaggctcttcccttgcctcttctgcaacaagaagttcctcaagtcgcag 343
            ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 9085 ggtggtggtgtgaggctcttcccttgcctcttctgcaacaagaagtttctcaagtcgcag 9026

                                                                        
Query: 344  gcgctagggggacaccagaatgcacacaagaaggagaggagcgtggggtggaacgcccac 403
            |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 9025 gcgctagggggacaccagaatgcacacaagaaggagaggagcgtcgggtggaacacccac 8966

                       
Query: 404  ctctacctccc 414
            |||||||||||
Sbjct: 8965 ctctacctccc 8955


>emb|BX000457.2|CNS08CDE Oryza sativa chromosome 12, . BAC OJ1388_B05 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 144241

 Score =  228 bits (115), Expect = 3e-56
 Identities = 127/131 (96%)
 Strand = Plus / Minus

                                                                          
Query: 284    ggtggcggtgtgaggctcttcccttgcctcttctgcaacaagaagttcctcaagtcgcag 343
              ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 135339 ggtggtggtgtgaggctcttcccttgcctcttctgcaacaagaagtttctcaagtcgcag 135280

                                                                          
Query: 344    gcgctagggggacaccagaatgcacacaagaaggagaggagcgtggggtggaacgcccac 403
              |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 135279 gcgctagggggacaccagaatgcacacaagaaggagaggagcgtcgggtggaacacccac 135220

                         
Query: 404    ctctacctccc 414
              |||||||||||
Sbjct: 135219 ctctacctccc 135209


>gb|AY022422.1| Oryza sativa microsatellite MRG4747 containing (ACG)X8, closest to
           marker S10074, genomic sequence
          Length = 224

 Score =  145 bits (73), Expect = 3e-31
 Identities = 79/81 (97%)
 Strand = Plus / Plus

                                                                       
Query: 334 caagtcgcaggcgctagggggacaccagaatgcacacaagaaggagaggagcgtggggtg 393
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1   caagtcgcaggcgctagggggacaccagaatgcacacaagaaggagaggagcgtcgggtg 60

                                
Query: 394 gaacgcccacctctacctccc 414
           |||| ||||||||||||||||
Sbjct: 61  gaacacccacctctacctccc 81