BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst012g11 (1108 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001070105.1| Oryza sativa (japonica cultivar-group) Os09g... 311 3e-81 dbj|AK060116.1| Oryza sativa (japonica cultivar-group) cDNA clon... 311 3e-81 gb|AY108454.1| Zea mays PCO149386 mRNA sequence 270 1e-68 ref|NM_001068774.1| Oryza sativa (japonica cultivar-group) Os08g... 258 4e-65 gb|AC099404.2| Oryza sativa (japonica cultivar-group) chromosome... 244 6e-61 >ref|NM_001070105.1| Oryza sativa (japonica cultivar-group) Os09g0499000 (Os09g0499000) mRNA, complete cds Length = 1111 Score = 311 bits (157), Expect = 3e-81 Identities = 287/332 (86%), Gaps = 15/332 (4%) Strand = Plus / Plus Query: 412 gaggaggtggagagcaagctcaaggaggag---------gtggggctcgggtgcttggac 462 ||||||||||||||||||||||||| |||| || || ||||| ||||||||| Sbjct: 409 gaggaggtggagagcaagctcaaggcggaggatgagcaggtcggcctcggctgcttggac 468 Query: 463 gccttggaggactccttacccatcaagaggggcctctccaacttctacgccgggaagtcc 522 ||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 469 gccttggaggaatccttacccatcaagagggggctctccaacttctacgccggcaagtcc 528 Query: 523 aagtcgttcacgagcctggcggaggcggccgcgacg------gcggccgtcaaggagctc 576 ||||||||||| ||||| || |||||| | ||| || ||||| | ||| ||||| Sbjct: 529 aagtcgttcaccagcctcgccgaggcgacggcgtcgccggcggcggcggccaacgagctg 588 Query: 577 gccaagccggacaaccccttcaacaagcgccgccgcatcctggccacatggtcgcggcgg 636 ||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 589 gccaagccggagaaccccttcaacaagcgccgccgcatcctcgccacctggtcgcggcga 648 Query: 637 gcctcctgcagctcgctcgccacggccacctacctgcccccgctcctcgcccccgaccac 696 |||||||||||||| |||||||| ||||||||||| || || |||||||| ||||||||| Sbjct: 649 gcctcctgcagctccctcgccaccgccacctacctcccacctctcctcgcgcccgaccac 708 Query: 697 gccgtcgccgagggtgacgaggaagaggagga 728 |||||||||||||| ||||||| |||||||| Sbjct: 709 gccgtcgccgagggcgacgagggtgaggagga 740 Score = 165 bits (83), Expect = 5e-37 Identities = 86/87 (98%) Strand = Plus / Plus Query: 289 gaggaagaggaggaggaggaggtgctgacggagagctcgtcgatcggcgcgccgtcgccg 348 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 295 gaggaggaggaggaggaggaggtgctgacggagagctcgtcgatcggcgcgccgtcgccg 354 Query: 349 gcgagctcgtcgatcggggagaactcc 375 ||||||||||||||||||||||||||| Sbjct: 355 gcgagctcgtcgatcggggagaactcc 381 >dbj|AK060116.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-E08, full insert sequence Length = 1111 Score = 311 bits (157), Expect = 3e-81 Identities = 287/332 (86%), Gaps = 15/332 (4%) Strand = Plus / Plus Query: 412 gaggaggtggagagcaagctcaaggaggag---------gtggggctcgggtgcttggac 462 ||||||||||||||||||||||||| |||| || || ||||| ||||||||| Sbjct: 409 gaggaggtggagagcaagctcaaggcggaggatgagcaggtcggcctcggctgcttggac 468 Query: 463 gccttggaggactccttacccatcaagaggggcctctccaacttctacgccgggaagtcc 522 ||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 469 gccttggaggaatccttacccatcaagagggggctctccaacttctacgccggcaagtcc 528 Query: 523 aagtcgttcacgagcctggcggaggcggccgcgacg------gcggccgtcaaggagctc 576 ||||||||||| ||||| || |||||| | ||| || ||||| | ||| ||||| Sbjct: 529 aagtcgttcaccagcctcgccgaggcgacggcgtcgccggcggcggcggccaacgagctg 588 Query: 577 gccaagccggacaaccccttcaacaagcgccgccgcatcctggccacatggtcgcggcgg 636 ||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 589 gccaagccggagaaccccttcaacaagcgccgccgcatcctcgccacctggtcgcggcga 648 Query: 637 gcctcctgcagctcgctcgccacggccacctacctgcccccgctcctcgcccccgaccac 696 |||||||||||||| |||||||| ||||||||||| || || |||||||| ||||||||| Sbjct: 649 gcctcctgcagctccctcgccaccgccacctacctcccacctctcctcgcgcccgaccac 708 Query: 697 gccgtcgccgagggtgacgaggaagaggagga 728 |||||||||||||| ||||||| |||||||| Sbjct: 709 gccgtcgccgagggcgacgagggtgaggagga 740 Score = 165 bits (83), Expect = 5e-37 Identities = 86/87 (98%) Strand = Plus / Plus Query: 289 gaggaagaggaggaggaggaggtgctgacggagagctcgtcgatcggcgcgccgtcgccg 348 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 295 gaggaggaggaggaggaggaggtgctgacggagagctcgtcgatcggcgcgccgtcgccg 354 Query: 349 gcgagctcgtcgatcggggagaactcc 375 ||||||||||||||||||||||||||| Sbjct: 355 gcgagctcgtcgatcggggagaactcc 381 >gb|AY108454.1| Zea mays PCO149386 mRNA sequence Length = 1173 Score = 270 bits (136), Expect = 1e-68 Identities = 393/477 (82%), Gaps = 15/477 (3%) Strand = Plus / Plus Query: 261 gaagaagatgagcgacgggttctttatagaggaagaggagg---aggaggaggtgctgac 317 ||||| || ||||||||| ||||| |||||||| ||||||| | || || |||||||| Sbjct: 280 gaagaggaggagcgacggcttcttcatagaggaggaggaggttgaagaagacgtgctgac 339 Query: 318 ggagagctcgtcgatcggcgcgccgtcgccggcgagctcgtcgatcggggagaactcctc 377 || | |||||||||||| |||||||| || || | ||||||||||| |||||||| || Sbjct: 340 tgacaactcgtcgatcggggcgccgtctccctcgggatcgtcgatcggtgagaactcgtc 399 Query: 378 gtcggaggccggcgagaagggggaggaggaagaagaggaggtggagagcaagctcaagga 437 |||||||||||||| |||| || | || |||||||| ||||||||||||||||| Sbjct: 400 gtcggaggccggcg------gggacgacggggaggaggaggtcgagagcaagctcaagga 453 Query: 438 ggaggtggggctcgggtgcttggacgccttggaggactccttacccatcaagaggggcct 497 || | | |||||| ||||||||||| | ||||||||||| || ||||||| |||||| Sbjct: 454 gggtgatgtgctcggctgcttggacgcgctcgaggactccttgccgatcaagaagggcct 513 Query: 498 ctccaacttctacgccgggaagtccaagtcgttcacgagcctggcggaggcg---gccgc 554 ||| | ||||||| |||| ||||| ||||||||||| ||||| || ||||| || || Sbjct: 514 ctcgagcttctactccggcaagtctaagtcgttcaccagcctcgccgaggccacagcggc 573 Query: 555 gacggcggccgtcaaggag---ctcgccaagccggacaaccccttcaacaagcgccgccg 611 | ||||||| ||||||||| || ||||||||||| || |||||||||||||||||||| Sbjct: 574 ggcggcggcggtcaaggaggtgctggccaagccggagaagcccttcaacaagcgccgccg 633 Query: 612 catcctggccacatggtcgcggcgggcctcctgcagctcgctcgccacggccacctacct 671 ||||||||||| ||||| || | ||||||||||||||||| ||||||||||||||||| Sbjct: 634 catcctggccaactggtccaggagagcctcctgcagctcgctggccacggccacctacct 693 Query: 672 gcccccgctcctcgcccccgaccacgccgtcgccgagggtgacgaggaagaggagga 728 ||| | |||| | | ||||||||||||||| ||||| || ||||||| |||||||| Sbjct: 694 gcctcagctcttgggccccgaccacgccgtggccgaaggggacgagggcgaggagga 750 >ref|NM_001068774.1| Oryza sativa (japonica cultivar-group) Os08g0516900 (Os08g0516900) mRNA, complete cds Length = 1158 Score = 258 bits (130), Expect = 4e-65 Identities = 218/246 (88%), Gaps = 6/246 (2%) Strand = Plus / Plus Query: 467 tggaggactccttacccatcaagaggggcctctccaacttctacgccgggaagtccaagt 526 |||||||| || | |||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 564 tggaggacgcccttcccatcaagaggggactctccaacttctacgccggcaagtccaagt 623 Query: 527 cgttcacgagcctggcggaggcggccgcgacggcggccgtcaaggagctcgccaagccgg 586 |||||||||||||||| |||||||| |||| |||||| | |||||| |||||||||||| Sbjct: 624 cgttcacgagcctggccgaggcggcggcgaaggcggcggcgaaggagatcgccaagccgg 683 Query: 587 acaaccccttcaacaagcgccgccgcatcctggccacatggtcgcggcgg---gcctcct 643 | ||||| |||||||||||||||||| |||| ||| | |||||||||||| || |||| Sbjct: 684 agaacccgttcaacaagcgccgccgcgtcctcgccgcgtggtcgcggcggcgcgcgtcct 743 Query: 644 gcagctcgctcgccacggccacctacctgcccccgctcctcgcccccgaccacgccgtcg 703 |||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct: 744 gcagctcgctggcca---ccacctacctgccccctctcctcgcccccgaccacgccgtcg 800 Query: 704 ccgagg 709 ||||| Sbjct: 801 tcgagg 806 >gb|AC099404.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0019D02, complete sequence Length = 154692 Score = 244 bits (123), Expect = 6e-61 Identities = 215/246 (87%), Gaps = 6/246 (2%) Strand = Plus / Minus Query: 489 gaggggcctctccaacttctacgccgggaagtccaagtcgttcacgagcctggcggaggc 548 |||||| |||||||||||||||||||| ||||||||||||||||| ||||| || ||||| Sbjct: 57651 gagggggctctccaacttctacgccggcaagtccaagtcgttcaccagcctcgccgaggc 57592 Query: 549 ggccgcgacg------gcggccgtcaaggagctcgccaagccggacaaccccttcaacaa 602 | | ||| || ||||| | ||| ||||| ||||||||||| |||||||||||||| Sbjct: 57591 gacggcgtcgccggcggcggcggccaacgagctggccaagccggagaaccccttcaacaa 57532 Query: 603 gcgccgccgcatcctggccacatggtcgcggcgggcctcctgcagctcgctcgccacggc 662 ||||||||||||||| ||||| ||||||||||| |||||||||||||| |||||||| || Sbjct: 57531 gcgccgccgcatcctcgccacctggtcgcggcgagcctcctgcagctccctcgccaccgc 57472 Query: 663 cacctacctgcccccgctcctcgcccccgaccacgccgtcgccgagggtgacgaggaaga 722 ||||||||| || || |||||||| ||||||||||||||||||||||| ||||||| || Sbjct: 57471 cacctacctcccacctctcctcgcgcccgaccacgccgtcgccgagggcgacgagggtga 57412 Query: 723 ggagga 728 |||||| Sbjct: 57411 ggagga 57406 Score = 165 bits (83), Expect = 5e-37 Identities = 86/87 (98%) Strand = Plus / Minus Query: 289 gaggaagaggaggaggaggaggtgctgacggagagctcgtcgatcggcgcgccgtcgccg 348 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58621 gaggaggaggaggaggaggaggtgctgacggagagctcgtcgatcggcgcgccgtcgccg 58562 Query: 349 gcgagctcgtcgatcggggagaactcc 375 ||||||||||||||||||||||||||| Sbjct: 58561 gcgagctcgtcgatcggggagaactcc 58535