BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst012c12 (953 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001070977.1| Oryza sativa (japonica cultivar-group) Os10g... 615 e-172 gb|AC092548.10| Oryza sativa chromosome 10 BAC OSJNBa0073L01 gen... 246 1e-61 dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 246 1e-61 gb|AY109389.1| Zea mays CL12741_2 mRNA sequence 184 4e-43 >ref|NM_001070977.1| Oryza sativa (japonica cultivar-group) Os10g0363700 (Os10g0363700) mRNA, complete cds Length = 5883 Score = 615 bits (310), Expect = e-172 Identities = 454/502 (90%) Strand = Plus / Plus Query: 236 gatatttcaaaagagcataagaaattagcaattgacttgaatcttttccagaaggagttg 295 |||||||||| ||||||| |||||||||| |||||||||||| |||||| |||||||| Sbjct: 5344 gatatttcaatggagcataggaaattagcagttgacttgaatcatttccatcaggagttg 5403 Query: 296 gaaagacttaaaaatgaaaatttgtctcctcttcttcccctggacattaatctaattgat 355 || ||||| |||||||| ||| | ||||||||||||||||||||||| ||||||||||| Sbjct: 5404 gagagactgaaaaatgagaatctttctcctcttcttcccctggacatcaatctaattgac 5463 Query: 356 ccatcactcggtggttttgaaagagcattatcacagcttgatatggcaaatgaacacttg 415 ||||||||| ||||||| || || |||||||||||||||||||||||||||||||| || Sbjct: 5464 ccatcactcagtggtttggagagggcattatcacagcttgatatggcaaatgaacattta 5523 Query: 416 caaagtatttttccttcatttaaagagcttccgggttctggtaatgccttggaaagagta 475 || |||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 5524 aggagcatttttccttcatttaaagagcttcctggttctggcaatgccttggaaagagta 5583 Query: 476 cttgctttggaactcgagctggcggaagcactccaagcaaagaagaaaacaggcatcctt 535 ||||||||||||||||| || || |||||||||||||||||||||||||||| ||||||| Sbjct: 5584 cttgctttggaactcgaactagcagaagcactccaagcaaagaagaaaacagacatcctt 5643 Query: 536 ttccagagttcattcctgaagcaacacaatgatgaagcagcggtcttccaaagcttcagg 595 |||||||||||||||||||||||||| |||||||||||||| || ||||| ||||||||| Sbjct: 5644 ttccagagttcattcctgaagcaacataatgatgaagcagcagtattccagagcttcagg 5703 Query: 596 gatatcaatgagctgatacaggatacgattgagttgaagagaaggcaggttgctgttgaa 655 || |||||||| ||||||||||||||||||||| ||||||||||||| || || || ||| Sbjct: 5704 gacatcaatgaactgatacaggatacgattgagctgaagagaaggcaagtggcagtagaa 5763 Query: 656 agtgagctaaaagatatgcagggcaggtactcagagctcagtgtgcaatttgccgaagtg 715 |||||||| ||||| |||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 5764 agtgagctgaaagacatgcagggcaggtactcagagctcagtgtgcagtttgctgaagtt 5823 Query: 716 gagggagaacggcagatgcttg 737 ||||||||| |||||| ||||| Sbjct: 5824 gagggagaaaggcagaagcttg 5845 >gb|AC092548.10| Oryza sativa chromosome 10 BAC OSJNBa0073L01 genomic sequence, complete sequence Length = 179199 Score = 246 bits (124), Expect = 1e-61 Identities = 178/196 (90%) Strand = Plus / Minus Query: 542 agttcattcctgaagcaacacaatgatgaagcagcggtcttccaaagcttcagggatatc 601 |||||||||||||||||||| |||||||||||||| || ||||| ||||||||||| ||| Sbjct: 121093 agttcattcctgaagcaacataatgatgaagcagcagtattccagagcttcagggacatc 121034 Query: 602 aatgagctgatacaggatacgattgagttgaagagaaggcaggttgctgttgaaagtgag 661 ||||| ||||||||||||||||||||| ||||||||||||| || || || ||||||||| Sbjct: 121033 aatgaactgatacaggatacgattgagctgaagagaaggcaagtggcagtagaaagtgag 120974 Query: 662 ctaaaagatatgcagggcaggtactcagagctcagtgtgcaatttgccgaagtggaggga 721 || ||||| |||||||||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 120973 ctgaaagacatgcagggcaggtactcagagctcagtgtgcagtttgctgaagttgaggga 120914 Query: 722 gaacggcagatgcttg 737 ||| |||||| ||||| Sbjct: 120913 gaaaggcagaagcttg 120898 Score = 194 bits (98), Expect = 5e-46 Identities = 116/122 (95%) Strand = Plus / Minus Query: 422 atttttccttcatttaaagagcttccgggttctggtaatgccttggaaagagtacttgct 481 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 121981 atttttccttcatttaaagagcttcctggttctggcaatgccttggaaagagtacttgct 121922 Query: 482 ttggaactcgagctggcggaagcactccaagcaaagaagaaaacaggcatccttttccag 541 ||||||||||| || || |||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121921 ttggaactcgaactagcagaagcactccaagcaaagaagaaaacagacatccttttccag 121862 Query: 542 ag 543 || Sbjct: 121861 ag 121860 Score = 133 bits (67), Expect = 1e-27 Identities = 100/111 (90%) Strand = Plus / Minus Query: 291 agttggaaagacttaaaaatgaaaatttgtctcctcttcttcccctggacattaatctaa 350 ||||||| ||||| |||||||| ||| | ||||||||||||||||||||||| ||||||| Sbjct: 122199 agttggagagactgaaaaatgagaatctttctcctcttcttcccctggacatcaatctaa 122140 Query: 351 ttgatccatcactcggtggttttgaaagagcattatcacagcttgatatgg 401 |||| ||||||||| ||||||| || || |||||||||||||||||||||| Sbjct: 122139 ttgacccatcactcagtggtttggagagggcattatcacagcttgatatgg 122089 >dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 246 bits (124), Expect = 1e-61 Identities = 178/196 (90%) Strand = Plus / Minus Query: 542 agttcattcctgaagcaacacaatgatgaagcagcggtcttccaaagcttcagggatatc 601 |||||||||||||||||||| |||||||||||||| || ||||| ||||||||||| ||| Sbjct: 10790325 agttcattcctgaagcaacataatgatgaagcagcagtattccagagcttcagggacatc 10790266 Query: 602 aatgagctgatacaggatacgattgagttgaagagaaggcaggttgctgttgaaagtgag 661 ||||| ||||||||||||||||||||| ||||||||||||| || || || ||||||||| Sbjct: 10790265 aatgaactgatacaggatacgattgagctgaagagaaggcaagtggcagtagaaagtgag 10790206 Query: 662 ctaaaagatatgcagggcaggtactcagagctcagtgtgcaatttgccgaagtggaggga 721 || ||||| |||||||||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 10790205 ctgaaagacatgcagggcaggtactcagagctcagtgtgcagtttgctgaagttgaggga 10790146 Query: 722 gaacggcagatgcttg 737 ||| |||||| ||||| Sbjct: 10790145 gaaaggcagaagcttg 10790130 Score = 194 bits (98), Expect = 5e-46 Identities = 116/122 (95%) Strand = Plus / Minus Query: 422 atttttccttcatttaaagagcttccgggttctggtaatgccttggaaagagtacttgct 481 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 10791213 atttttccttcatttaaagagcttcctggttctggcaatgccttggaaagagtacttgct 10791154 Query: 482 ttggaactcgagctggcggaagcactccaagcaaagaagaaaacaggcatccttttccag 541 ||||||||||| || || |||||||||||||||||||||||||||| ||||||||||||| Sbjct: 10791153 ttggaactcgaactagcagaagcactccaagcaaagaagaaaacagacatccttttccag 10791094 Query: 542 ag 543 || Sbjct: 10791093 ag 10791092 Score = 133 bits (67), Expect = 1e-27 Identities = 100/111 (90%) Strand = Plus / Minus Query: 291 agttggaaagacttaaaaatgaaaatttgtctcctcttcttcccctggacattaatctaa 350 ||||||| ||||| |||||||| ||| | ||||||||||||||||||||||| ||||||| Sbjct: 10791431 agttggagagactgaaaaatgagaatctttctcctcttcttcccctggacatcaatctaa 10791372 Query: 351 ttgatccatcactcggtggttttgaaagagcattatcacagcttgatatgg 401 |||| ||||||||| ||||||| || || |||||||||||||||||||||| Sbjct: 10791371 ttgacccatcactcagtggtttggagagggcattatcacagcttgatatgg 10791321 >gb|AY109389.1| Zea mays CL12741_2 mRNA sequence Length = 2037 Score = 184 bits (93), Expect = 4e-43 Identities = 165/189 (87%) Strand = Plus / Plus Query: 532 ccttttccagagttcattcctgaagcaacacaatgatgaagcagcggtcttccaaagctt 591 ||||||||||||||||||| ||||||| |||||||||||||| ||| ||||||||||||| Sbjct: 1548 ccttttccagagttcattcttgaagcagcacaatgatgaagcggcgatcttccaaagctt 1607 Query: 592 cagggatatcaatgagctgatacaggatacgattgagttgaagagaaggcaggttgctgt 651 |||||| |||||||| ||||||| |||||||| ||| ||||||| |||||| | || || Sbjct: 1608 cagggacatcaatgaagtgatacaagatacgatcgagctgaagaggaggcagatggcggt 1667 Query: 652 tgaaagtgagctaaaagatatgcagggcaggtactcagagctcagtgtgcaatttgccga 711 |||| |||||||| || |||||||||||||| ||||||||||| ||||| || ||||| Sbjct: 1668 agaaaacgagctaaaggagatgcagggcaggtattcagagctcagcgtgcagttcgccga 1727 Query: 712 agtggaggg 720 |||||||| Sbjct: 1728 ggtggaggg 1736 Score = 129 bits (65), Expect = 2e-26 Identities = 129/152 (84%) Strand = Plus / Plus Query: 344 aatctaattgatccatcactcggtggttttgaaagagcattatcacagcttgatatggca 403 ||||||| ||| ||||||||| ||||||| ||||| |||| ||||| || ||||||||| Sbjct: 1360 aatctaactgacccatcactcagtggtttggaaaggacattgtcacaactcgatatggca 1419 Query: 404 aatgaacacttgcaaagtatttttccttcatttaaagagcttccgggttctggtaatgcc 463 ||||| || |||||||||| || ||||||||||||||||| |||||||| ||||| Sbjct: 1420 aatgagcatttgcaaagtannnnnccatcatttaaagagcttcctggttctggcaatgct 1479 Query: 464 ttggaaagagtacttgctttggaactcgagct 495 ||||||||| |||| || |||||||||||||| Sbjct: 1480 ttggaaagattactcgccttggaactcgagct 1511 Score = 81.8 bits (41), Expect = 5e-12 Identities = 80/93 (86%) Strand = Plus / Plus Query: 220 caacaatcccatcaaagatatttcaaaagagcataagaaattagcaattgacttgaatct 279 ||||||| ||||||||||||||| ||||||| ||||||||||||| || || || || Sbjct: 512 caacaatagcatcaaagatatttctcaagagcacaagaaattagcaaatggattcaacct 571 Query: 280 tttccagaaggagttggaaagacttaaaaatga 312 ||||||||||||| |||||||||| ||| |||| Sbjct: 572 tttccagaaggagctggaaagactgaaagatga 604