BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst012b12 (736 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001051632.1| Oryza sativa (japonica cultivar-group) Os01g... 519 e-144 dbj|AK120093.1| Oryza sativa (japonica cultivar-group) cDNA clon... 519 e-144 gb|AY110469.1| Zea mays CL37712_1 mRNA sequence 331 2e-87 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 204 4e-49 dbj|AP003418.2| Oryza sativa (japonica cultivar-group) genomic D... 204 4e-49 >ref|NM_001051632.1| Oryza sativa (japonica cultivar-group) Os01g0898900 (Os01g0898900) mRNA, complete cds Length = 2053 Score = 519 bits (262), Expect = e-144 Identities = 397/442 (89%) Strand = Plus / Plus Query: 1 atttccttgggcttgtgatcactgccatcatccaaggacctagtagctttcacattctgg 60 ||||||| ||||||||||||||||||||||||||||| |||||||||||| | ||||||| Sbjct: 1007 atttcctagggcttgtgatcactgccatcatccaaggtcctagtagctttaatattctgg 1066 Query: 61 aagggcattcaaaggccacaatgtttcttatttgcaacaatgctgcacagggcatacttt 120 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||| | | Sbjct: 1067 aagggcattcaaaggccacaatgtttcttatttgcaacaatgccgctcagggcatattat 1126 Query: 121 cgtcatttttcttcaaatatgcagatacaattttgaagaagtactcatcaacaatcgcca 180 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1127 cgtcatttttcttcaaatatgcagatacaatattgaagaagtactcatcaacaatcgcca 1186 Query: 181 caatctttactggggtagcgtctcttgtattgtttggtcatactctgactataaatttta 240 ||||||||||||| ||||| ||| ||| |||||||||||||||||||| ||||||||| Sbjct: 1187 caatctttactggagtagcatctgctgtgttgtttggtcatactctgaccataaattttg 1246 Query: 241 ttcttggaatatcaatagtaattatatctatgcatcagtatctttctaatcaaattaagg 300 |||||| |||||||||||||||||||||||||||||||||||| || || |||||||||| Sbjct: 1247 ttcttgcaatatcaatagtaattatatctatgcatcagtatctctcgaaccaaattaagg 1306 Query: 301 atgaagtgccaagcagtaaaattgagatagctgatgctcaggatcacagattaaaggaat 360 ||||||| || ||||||||||||||||| | ||||||||| || ||||||| ||||||| Sbjct: 1307 atgaagttccgagcagtaaaattgagatgggtgatgctcatgagcacagatcgaaggaat 1366 Query: 361 ctgtatatgtcaatctgacagattcagtggcaagtgaggctaaacaccgccatggatctg 420 ||||| ||||| || | ||||| | || | ||||||||||||| | || || ||| Sbjct: 1367 ctgtagtcgtcaacgtgtctgattctattgctactgaggctaaacacaggcacggtactg 1426 Query: 421 atgagaggcagccacttcttcc 442 |||||||||||||||||||||| Sbjct: 1427 atgagaggcagccacttcttcc 1448 >dbj|AK120093.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013021H10, full insert sequence Length = 2056 Score = 519 bits (262), Expect = e-144 Identities = 397/442 (89%) Strand = Plus / Plus Query: 1 atttccttgggcttgtgatcactgccatcatccaaggacctagtagctttcacattctgg 60 ||||||| ||||||||||||||||||||||||||||| |||||||||||| | ||||||| Sbjct: 1010 atttcctagggcttgtgatcactgccatcatccaaggtcctagtagctttaatattctgg 1069 Query: 61 aagggcattcaaaggccacaatgtttcttatttgcaacaatgctgcacagggcatacttt 120 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||| | | Sbjct: 1070 aagggcattcaaaggccacaatgtttcttatttgcaacaatgccgctcagggcatattat 1129 Query: 121 cgtcatttttcttcaaatatgcagatacaattttgaagaagtactcatcaacaatcgcca 180 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1130 cgtcatttttcttcaaatatgcagatacaatattgaagaagtactcatcaacaatcgcca 1189 Query: 181 caatctttactggggtagcgtctcttgtattgtttggtcatactctgactataaatttta 240 ||||||||||||| ||||| ||| ||| |||||||||||||||||||| ||||||||| Sbjct: 1190 caatctttactggagtagcatctgctgtgttgtttggtcatactctgaccataaattttg 1249 Query: 241 ttcttggaatatcaatagtaattatatctatgcatcagtatctttctaatcaaattaagg 300 |||||| |||||||||||||||||||||||||||||||||||| || || |||||||||| Sbjct: 1250 ttcttgcaatatcaatagtaattatatctatgcatcagtatctctcgaaccaaattaagg 1309 Query: 301 atgaagtgccaagcagtaaaattgagatagctgatgctcaggatcacagattaaaggaat 360 ||||||| || ||||||||||||||||| | ||||||||| || ||||||| ||||||| Sbjct: 1310 atgaagttccgagcagtaaaattgagatgggtgatgctcatgagcacagatcgaaggaat 1369 Query: 361 ctgtatatgtcaatctgacagattcagtggcaagtgaggctaaacaccgccatggatctg 420 ||||| ||||| || | ||||| | || | ||||||||||||| | || || ||| Sbjct: 1370 ctgtagtcgtcaacgtgtctgattctattgctactgaggctaaacacaggcacggtactg 1429 Query: 421 atgagaggcagccacttcttcc 442 |||||||||||||||||||||| Sbjct: 1430 atgagaggcagccacttcttcc 1451 >gb|AY110469.1| Zea mays CL37712_1 mRNA sequence Length = 833 Score = 331 bits (167), Expect = 2e-87 Identities = 380/453 (83%), Gaps = 6/453 (1%) Strand = Plus / Minus Query: 7 ttgggcttgtgatcactgccatcatccaaggacctagtagctttcacattctggaagggc 66 |||||||||| ||||||| ||||||||||| || |||| ||| ||||||| ||||| | Sbjct: 798 ttgggcttgttgtcactgctatcatccaagggcccggtagttttaacattctagaaggcc 739 Query: 67 attcaaaggccacaatgtttcttatttgcaacaatgctgcacagggcatactttcgtcat 126 | ||||||||||| ||||||||||| |||||||||||||||||||||||| | || ||| Sbjct: 738 actcaaaggccacgatgtttcttatctgcaacaatgctgcacagggcatattatcatcan 679 Query: 127 ttttcttcaaatatgcagatacaattttgaagaagtactcatcaacaatcgccacaatct 186 |||||| |||| |||||||||||||||||||||||| |||||||| || | |||| Sbjct: 678 nnnncttcaagtatggagatacaattttgaagaagtactcgtcaacaattgcaagtatct 619 Query: 187 ttactggggtagcgtctcttgtattgtttggtcatactctgactataaattttattcttg 246 | || || ||||| ||| ||| ||||||| || || ||||| ||||||||| |||||| Sbjct: 618 tcaccggagtagcctctgctgtgctgtttggccacacactgacgataaattttgttcttg 559 Query: 247 gaatatcaatagtaattatatctatgcatcagtatctttctaatcaaattaaggatgaag 306 |||| ||||||||||| |||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 558 gaatttcaatagtaatcatatctatgcatcagtatctttctaaccaaattaaggacgaag 499 Query: 307 tgccaagcagtaaaattgagatagctgatgctcaggatcacagattaaaggaatctgtat 366 |||| ||||| ||| |||| || ||||| ||||| |||||||| ||||||| || | Sbjct: 498 tgcctagcagcaaagttgaaatggctgaagctcatgatcacagcagaaaggaacctagtt 439 Query: 367 atgtcaatctgacagattcagtggcaagtg------aggctaaacaccgccatggatctg 420 ||||||| || | ||||||| |||||||| || ||||||||||||||||||||| Sbjct: 438 atgtcaacgtgcctgattcaggggcaagtgagatgaagtctaaacaccgccatggatctg 379 Query: 421 atgagaggcagccacttcttcccgtctgatttt 453 | ||||||||||||||||||||||| ||||||| Sbjct: 378 acgagaggcagccacttcttcccgtatgatttt 346 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 204 bits (103), Expect = 4e-49 Identities = 130/139 (93%) Strand = Plus / Plus Query: 140 tgcagatacaattttgaagaagtactcatcaacaatcgccacaatctttactggggtagc 199 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 39082957 tgcagatacaatattgaagaagtactcatcaacaatcgccacaatctttactggagtagc 39083016 Query: 200 gtctcttgtattgtttggtcatactctgactataaattttattcttggaatatcaatagt 259 ||| ||| |||||||||||||||||||| ||||||||| |||||| |||||||||||| Sbjct: 39083017 atctgctgtgttgtttggtcatactctgaccataaattttgttcttgcaatatcaatagt 39083076 Query: 260 aattatatctatgcatcag 278 ||||||||||||||||||| Sbjct: 39083077 aattatatctatgcatcag 39083095 Score = 163 bits (82), Expect = 1e-36 Identities = 100/106 (94%) Strand = Plus / Plus Query: 39 cctagtagctttcacattctggaagggcattcaaaggccacaatgtttcttatttgcaac 98 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 39082614 cctagtagctttaatattctggaagggcattcaaaggccacaatgtttcttatttgcaac 39082673 Query: 99 aatgctgcacagggcatactttcgtcatttttcttcaaatatgcag 144 ||||| || ||||||||| | ||||||||||||||||||||||||| Sbjct: 39082674 aatgccgctcagggcatattatcgtcatttttcttcaaatatgcag 39082719 Score = 77.8 bits (39), Expect = 6e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 275 tcagtatctttctaatcaaattaaggatgaagtgccaagcagtaaaattgagatagctga 334 ||||||||| || || ||||||||||||||||| || ||||||||||||||||| | ||| Sbjct: 39083173 tcagtatctctcgaaccaaattaaggatgaagttccgagcagtaaaattgagatgggtga 39083232 Query: 335 tgctcaggatcacag 349 |||||| || ||||| Sbjct: 39083233 tgctcatgagcacag 39083247 >dbj|AP003418.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506A10 Length = 145265 Score = 204 bits (103), Expect = 4e-49 Identities = 130/139 (93%) Strand = Plus / Plus Query: 140 tgcagatacaattttgaagaagtactcatcaacaatcgccacaatctttactggggtagc 199 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 100937 tgcagatacaatattgaagaagtactcatcaacaatcgccacaatctttactggagtagc 100996 Query: 200 gtctcttgtattgtttggtcatactctgactataaattttattcttggaatatcaatagt 259 ||| ||| |||||||||||||||||||| ||||||||| |||||| |||||||||||| Sbjct: 100997 atctgctgtgttgtttggtcatactctgaccataaattttgttcttgcaatatcaatagt 101056 Query: 260 aattatatctatgcatcag 278 ||||||||||||||||||| Sbjct: 101057 aattatatctatgcatcag 101075 Score = 163 bits (82), Expect = 1e-36 Identities = 100/106 (94%) Strand = Plus / Plus Query: 39 cctagtagctttcacattctggaagggcattcaaaggccacaatgtttcttatttgcaac 98 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100594 cctagtagctttaatattctggaagggcattcaaaggccacaatgtttcttatttgcaac 100653 Query: 99 aatgctgcacagggcatactttcgtcatttttcttcaaatatgcag 144 ||||| || ||||||||| | ||||||||||||||||||||||||| Sbjct: 100654 aatgccgctcagggcatattatcgtcatttttcttcaaatatgcag 100699 Score = 77.8 bits (39), Expect = 6e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 275 tcagtatctttctaatcaaattaaggatgaagtgccaagcagtaaaattgagatagctga 334 ||||||||| || || ||||||||||||||||| || ||||||||||||||||| | ||| Sbjct: 101153 tcagtatctctcgaaccaaattaaggatgaagttccgagcagtaaaattgagatgggtga 101212 Query: 335 tgctcaggatcacag 349 |||||| || ||||| Sbjct: 101213 tgctcatgagcacag 101227