BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst011o11 (1260 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001057250.1| Oryza sativa (japonica cultivar-group) Os03g... 444 e-121 dbj|AK068169.1| Oryza sativa (japonica cultivar-group) cDNA clon... 444 e-121 dbj|AK059181.1| Oryza sativa (japonica cultivar-group) cDNA clon... 444 e-121 gb|AC145379.2| Oryza sativa chromosome 3 BAC OSJNBa0010N03 genom... 222 3e-54 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 222 3e-54 >ref|NM_001057250.1| Oryza sativa (japonica cultivar-group) Os03g0633900 (Os03g0633900) mRNA, complete cds Length = 1323 Score = 444 bits (224), Expect = e-121 Identities = 392/448 (87%) Strand = Plus / Plus Query: 205 cgacaacgccgcggccggatgagatcccgtggagcagggagctgtgcaattcggtgcggt 264 |||| |||||||||||| ||||||||||||||||||||||| ||||| || || ||| Sbjct: 215 cgacgacgccgcggccgacggagatcccgtggagcagggagctctgcaactccgttcggc 274 Query: 265 tgatcgggacggtgggcaccgacatggagctgaggcagctgcccagcggcgccgccgtcg 324 | |||||||||||||||||||| |||||||| |||||||||||||||||| | |||||| Sbjct: 275 tcatcgggacggtgggcaccgaggtggagctgcggcagctgcccagcggcggctccgtcg 334 Query: 325 cgcgggggcgcctcgccgtctggaagtcggccaccgagacaacatgggtaactctaacat 384 ||||||||||||||||| |||||||||||||||||||||| |||||||| |||||| ||| Sbjct: 335 cgcgggggcgcctcgccatctggaagtcggccaccgagaccacatgggtgactctagcat 394 Query: 385 tttgggacgacctggctgttgtggcctcagagcatgtcaagaagggcgatcggatatttg 444 ||||||| ||||| || |||||||| || |||||||| |||||||| || || ||||||| Sbjct: 395 tttgggatgacctagcggttgtggcttctgagcatgtgaagaagggtgaccgaatatttg 454 Query: 445 tttctggacggcttgtatcagatactgttgacgaggggcctgagaagcggcaggtttatt 504 |||||||||| ||||| || || |||||||| ||||| |||||||| || |||||||||| Sbjct: 455 tttctggacgccttgtgtcggacactgttgatgagggccctgagaaacgacaggtttatt 514 Query: 505 acaaggttgtggttcaacagttgaatttcattgagtccttccaggcagtgcagctatatg 564 | |||||||||||||||||||| ||||||||||||||||| ||| ||||||| |||||| Sbjct: 515 ataaggttgtggttcaacagttcaatttcattgagtcctttcagcaagtgcagttatatg 574 Query: 565 agccagagacaagccaggatacccaaggtggaaatcgtggagattacgttgattctacct 624 |||||||| || ||| ||||||| ||||||||| | ||||||||| |||| |||||||| Sbjct: 575 agccagaggcaggcctggataccttaggtggaaagcatggagattatgttggttctacct 634 Query: 625 ctggttcaactgaggataaaaataggga 652 |||| || | ||||| ||||| |||||| Sbjct: 635 ctggctcgagtgagggtaaaagtaggga 662 Score = 347 bits (175), Expect = 7e-92 Identities = 244/267 (91%) Strand = Plus / Plus Query: 667 cctctcgttcaactgaagagttgtggcaagccttctttgctaatcctcttgactggtggg 726 |||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 677 cctcccgttcaactgaacagttgtggcaagccttctttgctaatccttttgactggtggg 736 Query: 727 ataacaggacaaataagaagaacccgaggtatccggacttcaagcacaagcacactggtg 786 |||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||| Sbjct: 737 ataacaggacaaataagaagaacccgaggtatccagacttcaagcacaaacacaccggtg 796 Query: 787 aagcattgtgggttgatgggaggtacaaccccaattgggttatctctcaattggcaattt 846 ||||||||||||||||||||||| |||| || |||||||||||||| || ||||||||| Sbjct: 797 aagcattgtgggttgatgggaggaacaatccaaattgggttatctcccagttggcaattc 856 Query: 847 tggactcgagaatgggttctctgcaagagagagagaaaaaaccagtctcctttatgtatg 906 |||||||||||||||||||||| |||| | || | |||||||| |||||||||||| Sbjct: 857 tggactcgagaatgggttctcttcaaggcaatgataggaaaccagttgcctttatgtatg 916 Query: 907 ctgatgacttcatgacatctgacaccg 933 ||||||||||||||||| ||||||||| Sbjct: 917 ctgatgacttcatgacacctgacaccg 943 >dbj|AK068169.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129H11, full insert sequence Length = 1208 Score = 444 bits (224), Expect = e-121 Identities = 392/448 (87%) Strand = Plus / Plus Query: 205 cgacaacgccgcggccggatgagatcccgtggagcagggagctgtgcaattcggtgcggt 264 |||| |||||||||||| ||||||||||||||||||||||| ||||| || || ||| Sbjct: 231 cgacgacgccgcggccgacggagatcccgtggagcagggagctctgcaactccgttcggc 290 Query: 265 tgatcgggacggtgggcaccgacatggagctgaggcagctgcccagcggcgccgccgtcg 324 | |||||||||||||||||||| |||||||| |||||||||||||||||| | |||||| Sbjct: 291 tcatcgggacggtgggcaccgaggtggagctgcggcagctgcccagcggcggctccgtcg 350 Query: 325 cgcgggggcgcctcgccgtctggaagtcggccaccgagacaacatgggtaactctaacat 384 ||||||||||||||||| |||||||||||||||||||||| |||||||| |||||| ||| Sbjct: 351 cgcgggggcgcctcgccatctggaagtcggccaccgagaccacatgggtgactctagcat 410 Query: 385 tttgggacgacctggctgttgtggcctcagagcatgtcaagaagggcgatcggatatttg 444 ||||||| ||||| || |||||||| || |||||||| |||||||| || || ||||||| Sbjct: 411 tttgggatgacctagcggttgtggcttctgagcatgtgaagaagggtgaccgaatatttg 470 Query: 445 tttctggacggcttgtatcagatactgttgacgaggggcctgagaagcggcaggtttatt 504 |||||||||| ||||| || || |||||||| ||||| |||||||| || |||||||||| Sbjct: 471 tttctggacgccttgtgtcggacactgttgatgagggccctgagaaacgacaggtttatt 530 Query: 505 acaaggttgtggttcaacagttgaatttcattgagtccttccaggcagtgcagctatatg 564 | |||||||||||||||||||| ||||||||||||||||| ||| ||||||| |||||| Sbjct: 531 ataaggttgtggttcaacagttcaatttcattgagtcctttcagcaagtgcagttatatg 590 Query: 565 agccagagacaagccaggatacccaaggtggaaatcgtggagattacgttgattctacct 624 |||||||| || ||| ||||||| ||||||||| | ||||||||| |||| |||||||| Sbjct: 591 agccagaggcaggcctggataccttaggtggaaagcatggagattatgttggttctacct 650 Query: 625 ctggttcaactgaggataaaaataggga 652 |||| || | ||||| ||||| |||||| Sbjct: 651 ctggctcgagtgagggtaaaagtaggga 678 Score = 347 bits (175), Expect = 7e-92 Identities = 244/267 (91%) Strand = Plus / Plus Query: 667 cctctcgttcaactgaagagttgtggcaagccttctttgctaatcctcttgactggtggg 726 |||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 693 cctcccgttcaactgaacagttgtggcaagccttctttgctaatccttttgactggtggg 752 Query: 727 ataacaggacaaataagaagaacccgaggtatccggacttcaagcacaagcacactggtg 786 |||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||| Sbjct: 753 ataacaggacaaataagaagaacccgaggtatccagacttcaagcacaaacacaccggtg 812 Query: 787 aagcattgtgggttgatgggaggtacaaccccaattgggttatctctcaattggcaattt 846 ||||||||||||||||||||||| |||| || |||||||||||||| || ||||||||| Sbjct: 813 aagcattgtgggttgatgggaggaacaatccaaattgggttatctcccagttggcaattc 872 Query: 847 tggactcgagaatgggttctctgcaagagagagagaaaaaaccagtctcctttatgtatg 906 |||||||||||||||||||||| |||| | || | |||||||| |||||||||||| Sbjct: 873 tggactcgagaatgggttctcttcaaggcaatgataggaaaccagttgcctttatgtatg 932 Query: 907 ctgatgacttcatgacatctgacaccg 933 ||||||||||||||||| ||||||||| Sbjct: 933 ctgatgacttcatgacacctgacaccg 959 >dbj|AK059181.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-G01, full insert sequence Length = 1323 Score = 444 bits (224), Expect = e-121 Identities = 392/448 (87%) Strand = Plus / Plus Query: 205 cgacaacgccgcggccggatgagatcccgtggagcagggagctgtgcaattcggtgcggt 264 |||| |||||||||||| ||||||||||||||||||||||| ||||| || || ||| Sbjct: 215 cgacgacgccgcggccgacggagatcccgtggagcagggagctctgcaactccgttcggc 274 Query: 265 tgatcgggacggtgggcaccgacatggagctgaggcagctgcccagcggcgccgccgtcg 324 | |||||||||||||||||||| |||||||| |||||||||||||||||| | |||||| Sbjct: 275 tcatcgggacggtgggcaccgaggtggagctgcggcagctgcccagcggcggctccgtcg 334 Query: 325 cgcgggggcgcctcgccgtctggaagtcggccaccgagacaacatgggtaactctaacat 384 ||||||||||||||||| |||||||||||||||||||||| |||||||| |||||| ||| Sbjct: 335 cgcgggggcgcctcgccatctggaagtcggccaccgagaccacatgggtgactctagcat 394 Query: 385 tttgggacgacctggctgttgtggcctcagagcatgtcaagaagggcgatcggatatttg 444 ||||||| ||||| || |||||||| || |||||||| |||||||| || || ||||||| Sbjct: 395 tttgggatgacctagcggttgtggcttctgagcatgtgaagaagggtgaccgaatatttg 454 Query: 445 tttctggacggcttgtatcagatactgttgacgaggggcctgagaagcggcaggtttatt 504 |||||||||| ||||| || || |||||||| ||||| |||||||| || |||||||||| Sbjct: 455 tttctggacgccttgtgtcggacactgttgatgagggccctgagaaacgacaggtttatt 514 Query: 505 acaaggttgtggttcaacagttgaatttcattgagtccttccaggcagtgcagctatatg 564 | |||||||||||||||||||| ||||||||||||||||| ||| ||||||| |||||| Sbjct: 515 ataaggttgtggttcaacagttcaatttcattgagtcctttcagcaagtgcagttatatg 574 Query: 565 agccagagacaagccaggatacccaaggtggaaatcgtggagattacgttgattctacct 624 |||||||| || ||| ||||||| ||||||||| | ||||||||| |||| |||||||| Sbjct: 575 agccagaggcaggcctggataccttaggtggaaagcatggagattatgttggttctacct 634 Query: 625 ctggttcaactgaggataaaaataggga 652 |||| || | ||||| ||||| |||||| Sbjct: 635 ctggctcgagtgagggtaaaagtaggga 662 Score = 347 bits (175), Expect = 7e-92 Identities = 244/267 (91%) Strand = Plus / Plus Query: 667 cctctcgttcaactgaagagttgtggcaagccttctttgctaatcctcttgactggtggg 726 |||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 677 cctcccgttcaactgaacagttgtggcaagccttctttgctaatccttttgactggtggg 736 Query: 727 ataacaggacaaataagaagaacccgaggtatccggacttcaagcacaagcacactggtg 786 |||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||| Sbjct: 737 ataacaggacaaataagaagaacccgaggtatccagacttcaagcacaaacacaccggtg 796 Query: 787 aagcattgtgggttgatgggaggtacaaccccaattgggttatctctcaattggcaattt 846 ||||||||||||||||||||||| |||| || |||||||||||||| || ||||||||| Sbjct: 797 aagcattgtgggttgatgggaggaacaatccaaattgggttatctcccagttggcaattc 856 Query: 847 tggactcgagaatgggttctctgcaagagagagagaaaaaaccagtctcctttatgtatg 906 |||||||||||||||||||||| |||| | || | |||||||| |||||||||||| Sbjct: 857 tggactcgagaatgggttctcttcaaggcaatgataggaaaccagttgcctttatgtatg 916 Query: 907 ctgatgacttcatgacatctgacaccg 933 ||||||||||||||||| ||||||||| Sbjct: 917 ctgatgacttcatgacacctgacaccg 943 >gb|AC145379.2| Oryza sativa chromosome 3 BAC OSJNBa0010N03 genomic sequence, complete sequence Length = 140980 Score = 222 bits (112), Expect = 3e-54 Identities = 172/192 (89%) Strand = Plus / Plus Query: 742 agaagaacccgaggtatccggacttcaagcacaagcacactggtgaagcattgtgggttg 801 ||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| Sbjct: 120578 agaagaacccgaggtatccagacttcaagcacaaacacaccggtgaagcattgtgggttg 120637 Query: 802 atgggaggtacaaccccaattgggttatctctcaattggcaattttggactcgagaatgg 861 |||||||| |||| || |||||||||||||| || ||||||||| ||||||||||||||| Sbjct: 120638 atgggaggaacaatccaaattgggttatctcccagttggcaattctggactcgagaatgg 120697 Query: 862 gttctctgcaagagagagagaaaaaaccagtctcctttatgtatgctgatgacttcatga 921 ||||||| |||| | || | |||||||| ||||||||||||||||||||||||||| Sbjct: 120698 gttctcttcaaggcaatgataggaaaccagttgcctttatgtatgctgatgacttcatga 120757 Query: 922 catctgacaccg 933 || ||||||||| Sbjct: 120758 cacctgacaccg 120769 Score = 196 bits (99), Expect = 2e-46 Identities = 150/167 (89%) Strand = Plus / Plus Query: 205 cgacaacgccgcggccggatgagatcccgtggagcagggagctgtgcaattcggtgcggt 264 |||| |||||||||||| ||||||||||||||||||||||| ||||| || || ||| Sbjct: 117179 cgacgacgccgcggccgacggagatcccgtggagcagggagctctgcaactccgttcggc 117238 Query: 265 tgatcgggacggtgggcaccgacatggagctgaggcagctgcccagcggcgccgccgtcg 324 | |||||||||||||||||||| |||||||| |||||||||||||||||| | |||||| Sbjct: 117239 tcatcgggacggtgggcaccgaggtggagctgcggcagctgcccagcggcggctccgtcg 117298 Query: 325 cgcgggggcgcctcgccgtctggaagtcggccaccgagacaacatgg 371 ||||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 117299 cgcgggggcgcctcgccatctggaagtcggccaccgagaccacatgg 117345 Score = 129 bits (65), Expect = 3e-26 Identities = 74/77 (96%) Strand = Plus / Plus Query: 667 cctctcgttcaactgaagagttgtggcaagccttctttgctaatcctcttgactggtggg 726 |||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 119095 cctcccgttcaactgaacagttgtggcaagccttctttgctaatccttttgactggtggg 119154 Query: 727 ataacaggacaaataag 743 ||||||||||||||||| Sbjct: 119155 ataacaggacaaataag 119171 Score = 123 bits (62), Expect = 2e-24 Identities = 122/142 (85%) Strand = Plus / Plus Query: 370 gggtaactctaacattttgggacgacctggctgttgtggcctcagagcatgtcaagaagg 429 |||| |||||| |||||||||| ||||| || |||||||| || |||||||| ||||||| Sbjct: 118050 gggtgactctagcattttgggatgacctagcggttgtggcttctgagcatgtgaagaagg 118109 Query: 430 gcgatcggatatttgtttctggacggcttgtatcagatactgttgacgaggggcctgaga 489 | || || ||||||||||||||||| ||||| || || |||||||| ||||| ||||||| Sbjct: 118110 gtgaccgaatatttgtttctggacgccttgtgtcggacactgttgatgagggccctgaga 118169 Query: 490 agcggcaggtttattacaaggt 511 | || ||||||||||| ||||| Sbjct: 118170 aacgacaggtttattataaggt 118191 Score = 95.6 bits (48), Expect = 4e-16 Identities = 72/80 (90%) Strand = Plus / Plus Query: 508 aggttgtggttcaacagttgaatttcattgagtccttccaggcagtgcagctatatgagc 567 ||||||||||||||||||| ||||||||||||||||| ||| ||||||| ||||||||| Sbjct: 118271 aggttgtggttcaacagttcaatttcattgagtcctttcagcaagtgcagttatatgagc 118330 Query: 568 cagagacaagccaggatacc 587 ||||| || ||| ||||||| Sbjct: 118331 cagaggcaggcctggatacc 118350 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 222 bits (112), Expect = 3e-54 Identities = 172/192 (89%) Strand = Plus / Minus Query: 742 agaagaacccgaggtatccggacttcaagcacaagcacactggtgaagcattgtgggttg 801 ||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| Sbjct: 24019541 agaagaacccgaggtatccagacttcaagcacaaacacaccggtgaagcattgtgggttg 24019482 Query: 802 atgggaggtacaaccccaattgggttatctctcaattggcaattttggactcgagaatgg 861 |||||||| |||| || |||||||||||||| || ||||||||| ||||||||||||||| Sbjct: 24019481 atgggaggaacaatccaaattgggttatctcccagttggcaattctggactcgagaatgg 24019422 Query: 862 gttctctgcaagagagagagaaaaaaccagtctcctttatgtatgctgatgacttcatga 921 ||||||| |||| | || | |||||||| ||||||||||||||||||||||||||| Sbjct: 24019421 gttctcttcaaggcaatgataggaaaccagttgcctttatgtatgctgatgacttcatga 24019362 Query: 922 catctgacaccg 933 || ||||||||| Sbjct: 24019361 cacctgacaccg 24019350 Score = 196 bits (99), Expect = 2e-46 Identities = 150/167 (89%) Strand = Plus / Minus Query: 205 cgacaacgccgcggccggatgagatcccgtggagcagggagctgtgcaattcggtgcggt 264 |||| |||||||||||| ||||||||||||||||||||||| ||||| || || ||| Sbjct: 24022940 cgacgacgccgcggccgacggagatcccgtggagcagggagctctgcaactccgttcggc 24022881 Query: 265 tgatcgggacggtgggcaccgacatggagctgaggcagctgcccagcggcgccgccgtcg 324 | |||||||||||||||||||| |||||||| |||||||||||||||||| | |||||| Sbjct: 24022880 tcatcgggacggtgggcaccgaggtggagctgcggcagctgcccagcggcggctccgtcg 24022821 Query: 325 cgcgggggcgcctcgccgtctggaagtcggccaccgagacaacatgg 371 ||||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 24022820 cgcgggggcgcctcgccatctggaagtcggccaccgagaccacatgg 24022774 Score = 129 bits (65), Expect = 3e-26 Identities = 74/77 (96%) Strand = Plus / Minus Query: 667 cctctcgttcaactgaagagttgtggcaagccttctttgctaatcctcttgactggtggg 726 |||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 24021024 cctcccgttcaactgaacagttgtggcaagccttctttgctaatccttttgactggtggg 24020965 Query: 727 ataacaggacaaataag 743 ||||||||||||||||| Sbjct: 24020964 ataacaggacaaataag 24020948 Score = 123 bits (62), Expect = 2e-24 Identities = 122/142 (85%) Strand = Plus / Minus Query: 370 gggtaactctaacattttgggacgacctggctgttgtggcctcagagcatgtcaagaagg 429 |||| |||||| |||||||||| ||||| || |||||||| || |||||||| ||||||| Sbjct: 24022069 gggtgactctagcattttgggatgacctagcggttgtggcttctgagcatgtgaagaagg 24022010 Query: 430 gcgatcggatatttgtttctggacggcttgtatcagatactgttgacgaggggcctgaga 489 | || || ||||||||||||||||| ||||| || || |||||||| ||||| ||||||| Sbjct: 24022009 gtgaccgaatatttgtttctggacgccttgtgtcggacactgttgatgagggccctgaga 24021950 Query: 490 agcggcaggtttattacaaggt 511 | || ||||||||||| ||||| Sbjct: 24021949 aacgacaggtttattataaggt 24021928 Score = 95.6 bits (48), Expect = 4e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 508 aggttgtggttcaacagttgaatttcattgagtccttccaggcagtgcagctatatgagc 567 ||||||||||||||||||| ||||||||||||||||| ||| ||||||| ||||||||| Sbjct: 24021848 aggttgtggttcaacagttcaatttcattgagtcctttcagcaagtgcagttatatgagc 24021789 Query: 568 cagagacaagccaggatacc 587 ||||| || ||| ||||||| Sbjct: 24021788 cagaggcaggcctggatacc 24021769