BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst011m03 (665 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001048962.1| Oryza sativa (japonica cultivar-group) Os01g... 389 e-104 gb|DQ245013.1| Zea mays clone 12195 mRNA sequence 361 2e-96 gb|DQ244663.1| Zea mays clone 9952 mRNA sequence 361 2e-96 gb|DQ244534.1| Zea mays clone 8938 mRNA sequence 353 6e-94 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 216 9e-53 >ref|NM_001048962.1| Oryza sativa (japonica cultivar-group) Os01g0220500 (Os01g0220500) mRNA, complete cds Length = 288 Score = 389 bits (196), Expect = e-104 Identities = 265/288 (92%) Strand = Plus / Plus Query: 101 atggcgaagccgcagcaggaggtgtacttcgtgttcatgaactttgaccctgagtacgag 160 ||||||||||||||||||||||| |||||||||||||||||||| ||||||| || ||| Sbjct: 1 atggcgaagccgcagcaggaggtctacttcgtgttcatgaacttcgaccctgtctatgag 60 Query: 161 cgcctaagagccgatcgcttgaaggagggatcggcgacgctggacgcgtacctgagccac 220 ||||| ||||| || || | |||||||| ||||| ||||||||||| |||||||||||| Sbjct: 61 cgcctcagagctgaccggtccaaggaggggtcggccacgctggacgcctacctgagccac 120 Query: 221 aagcacgacaagctgctcgccaagctcctccagcccgacacctaccggaagaagtcctcg 280 |||||||||||||| |||||||||||||| ||||| |||||||||||||||||||| || Sbjct: 121 aagcacgacaagctcctcgccaagctcctgcagccggacacctaccggaagaagtcgtct 180 Query: 281 ctcgccatcgtcgacggcttcgctgtcgagataaccgatgctcaggcgagcatactgaga 340 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 181 ctcgccatcgtcgacggcttcgccgtcgagataaccgatgctcaggcgagcatactgagg 240 Query: 341 tcggcgaaggaggtgagggtggtggagaagaaccaggagcttgcttga 388 | ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 241 ttggcgaaggaagtgagggtggtggagaagaaccaggagcttgcttga 288 >gb|DQ245013.1| Zea mays clone 12195 mRNA sequence Length = 1007 Score = 361 bits (182), Expect = 2e-96 Identities = 262/288 (90%), Gaps = 3/288 (1%) Strand = Plus / Plus Query: 97 agcaatggcgaagccgcagcaggaggtgtacttcgtgttcatgaactttgaccctgagta 156 |||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 170 agcaatggcgaagcagcagcaggaggtgtacttcgtgttcatgaactttgaccccgtgta 229 Query: 157 cgagcgcctaagagccgatcgcttg---aaggagggatcggcgacgctggacgcgtacct 213 ||||||||| ||||| || || | | |||||||| ||||| ||||||||||||||||| Sbjct: 230 cgagcgcctcagagctgagcggtcgtccaaggaggggtcggccacgctggacgcgtacct 289 Query: 214 gagccacaagcacgacaagctgctcgccaagctcctccagcccgacacctaccggaagaa 273 ||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||| Sbjct: 290 gagccacaagcacgacaagctgctcgccaagctgctccagcctgactcctaccggaagag 349 Query: 274 gtcctcgctcgccatcgtcgacggcttcgctgtcgagataaccgatgctcaggcgagcat 333 ||| ||||||||||||||||| |||||||| |||||||||||||| | |||||| ||| | Sbjct: 350 gtcgtcgctcgccatcgtcgatggcttcgccgtcgagataaccgaggatcaggcaagcgt 409 Query: 334 actgagatcggcgaaggaggtgagggtggtggagaagaaccaggagct 381 ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 410 tctgagatcggccaaggaggtgagggtggtggagaagaaccaggagct 457 >gb|DQ244663.1| Zea mays clone 9952 mRNA sequence Length = 820 Score = 361 bits (182), Expect = 2e-96 Identities = 262/288 (90%), Gaps = 3/288 (1%) Strand = Plus / Plus Query: 97 agcaatggcgaagccgcagcaggaggtgtacttcgtgttcatgaactttgaccctgagta 156 |||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 152 agcaatggcgaagcagcagcaggaggtgtacttcgtgttcatgaactttgaccccgtgta 211 Query: 157 cgagcgcctaagagccgatcgcttg---aaggagggatcggcgacgctggacgcgtacct 213 ||||||||| ||||| || || | | |||||||| ||||| ||||||||||||||||| Sbjct: 212 cgagcgcctcagagctgagcggtcgtccaaggaggggtcggccacgctggacgcgtacct 271 Query: 214 gagccacaagcacgacaagctgctcgccaagctcctccagcccgacacctaccggaagaa 273 ||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||| Sbjct: 272 gagccacaagcacgacaagctgctcgccaagctgctccagcctgactcctaccggaagag 331 Query: 274 gtcctcgctcgccatcgtcgacggcttcgctgtcgagataaccgatgctcaggcgagcat 333 ||| ||||||||||||||||| |||||||| |||||||||||||| | |||||| ||| | Sbjct: 332 gtcgtcgctcgccatcgtcgatggcttcgccgtcgagataaccgaggatcaggcaagcgt 391 Query: 334 actgagatcggcgaaggaggtgagggtggtggagaagaaccaggagct 381 ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 392 tctgagatcggccaaggaggtgagggtggtggagaagaaccaggagct 439 >gb|DQ244534.1| Zea mays clone 8938 mRNA sequence Length = 899 Score = 353 bits (178), Expect = 6e-94 Identities = 261/288 (90%), Gaps = 3/288 (1%) Strand = Plus / Plus Query: 97 agcaatggcgaagccgcagcaggaggtgtacttcgtgttcatgaactttgaccctgagta 156 |||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 173 agcaatggcgaagcagcagcaggaggtgtacttcgtgttcatgaactttgaccccgtgta 232 Query: 157 cgagcgcctaagagccgatcgcttg---aaggagggatcggcgacgctggacgcgtacct 213 ||||||||| ||||| || || | | |||||||| ||||| ||||||||||||||||| Sbjct: 233 cgagcgcctcagagctgagcggtcgtccaaggaggggtcggccacgctggacgcgtacct 292 Query: 214 gagccacaagcacgacaagctgctcgccaagctcctccagcccgacacctaccggaagaa 273 ||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||| Sbjct: 293 gagccacaagcacgacaagctgctcgccaagctgctccagcctgactcctaccggaagag 352 Query: 274 gtcctcgctcgccatcgtcgacggcttcgctgtcgagataaccgatgctcaggcgagcat 333 ||| |||||||||||||||| |||||||| |||||||||||||| | |||||| ||| | Sbjct: 353 gtcgacgctcgccatcgtcgatggcttcgccgtcgagataaccgaggatcaggcaagcgt 412 Query: 334 actgagatcggcgaaggaggtgagggtggtggagaagaaccaggagct 381 ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 413 tctgagatcggccaaggaggtgagggtggtggagaagaaccaggagct 460 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 216 bits (109), Expect = 9e-53 Identities = 136/145 (93%) Strand = Plus / Minus Query: 182 aaggagggatcggcgacgctggacgcgtacctgagccacaagcacgacaagctgctcgcc 241 |||||||| ||||| ||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 6590731 aaggaggggtcggccacgctggacgcctacctgagccacaagcacgacaagctcctcgcc 6590672 Query: 242 aagctcctccagcccgacacctaccggaagaagtcctcgctcgccatcgtcgacggcttc 301 |||||||| ||||| |||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 6590671 aagctcctgcagccggacacctaccggaagaagtcgtctctcgccatcgtcgacggcttc 6590612 Query: 302 gctgtcgagataaccgatgctcagg 326 || |||||||||||||||||||||| Sbjct: 6590611 gccgtcgagataaccgatgctcagg 6590587 Score = 107 bits (54), Expect = 6e-20 Identities = 63/66 (95%) Strand = Plus / Minus Query: 323 caggcgagcatactgagatcggcgaaggaggtgagggtggtggagaagaaccaggagctt 382 ||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||| Sbjct: 6590443 caggcgagcatactgaggttggcgaaggaagtgagggtggtggagaagaaccaggagctt 6590384 Query: 383 gcttga 388 |||||| Sbjct: 6590383 gcttga 6590378 Score = 101 bits (51), Expect = 4e-18 Identities = 69/75 (92%) Strand = Plus / Minus Query: 97 agcaatggcgaagccgcagcaggaggtgtacttcgtgttcatgaactttgaccctgagta 156 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| || Sbjct: 6590986 agcaatggcgaagccgcagcaggaggtctacttcgtgttcatgaacttcgaccctgtcta 6590927 Query: 157 cgagcgcctaagagc 171 |||||||| ||||| Sbjct: 6590926 tgagcgcctcagagc 6590912