BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst011k08 (622 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AB255026.1| Oryza sativa (japonica cultivar-group) NOL1 mRNA... 214 3e-52 ref|NM_001057333.1| Oryza sativa (japonica cultivar-group) Os03g... 184 3e-43 gb|AC120535.5| Oryza sativa (japonica cultivar-group) chromosome... 145 2e-31 gb|AC138004.3| Oryza sativa chromosome 3 BAC OSJNBb0023J24 genom... 145 2e-31 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31 >dbj|AB255026.1| Oryza sativa (japonica cultivar-group) NOL1 mRNA for short-chain dehydrogenase/reductase NOL1, complete cds Length = 1032 Score = 214 bits (108), Expect = 3e-52 Identities = 147/160 (91%) Strand = Plus / Plus Query: 297 ggttgcagattaccttgttccaaacataagagcaatccctaccaaccaatccatgaaacc 356 |||||| ||||| || ||||||||||| |||||||| ||||| ||||| ||||||||||| Sbjct: 873 ggttgcggattatctcgttccaaacatcagagcaatacctactaaccagtccatgaaacc 932 Query: 357 aacctacattcactttctcacaggcttgaaagcctactccagaatattttcaagacttgc 416 ||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 933 aacctacatccgttttctcacaggcttgaaagcctactccagaatattttcaaggattgc 992 Query: 417 ttttggtgctcgtaggaacaagtatgttgttgaggattag 456 ||||||||||||||||||||||||||||| |||||||||| Sbjct: 993 ttttggtgctcgtaggaacaagtatgttgctgaggattag 1032 >ref|NM_001057333.1| Oryza sativa (japonica cultivar-group) Os03g0654600 (Os03g0654600) mRNA, complete cds Length = 1620 Score = 184 bits (93), Expect = 3e-43 Identities = 129/141 (91%) Strand = Plus / Plus Query: 297 ggttgcagattaccttgttccaaacataagagcaatccctaccaaccaatccatgaaacc 356 |||||| ||||| || ||||||||||| |||||||| ||||| ||||| ||||||||||| Sbjct: 873 ggttgcggattatctcgttccaaacatcagagcaatacctactaaccagtccatgaaacc 932 Query: 357 aacctacattcactttctcacaggcttgaaagcctactccagaatattttcaagacttgc 416 ||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 933 aacctacatccgttttctcacaggcttgaaagcctactccagaatattttcaaggattgc 992 Query: 417 ttttggtgctcgtaggaacaa 437 ||||||||||||||||||||| Sbjct: 993 ttttggtgctcgtaggaacaa 1013 >gb|AC120535.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0092N01, complete sequence Length = 161741 Score = 145 bits (73), Expect = 2e-31 Identities = 103/113 (91%) Strand = Plus / Minus Query: 296 aggttgcagattaccttgttccaaacataagagcaatccctaccaaccaatccatgaaac 355 ||||||| ||||| || ||||||||||| |||||||| ||||| ||||| |||||||||| Sbjct: 130476 aggttgcggattatctcgttccaaacatcagagcaatacctactaaccagtccatgaaac 130417 Query: 356 caacctacattcactttctcacaggcttgaaagcctactccagaatattttca 408 |||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 130416 caacctacatccgttttctcacaggcttgaaagcctactccagaatattttca 130364 Score = 109 bits (55), Expect = 1e-20 Identities = 85/94 (90%), Gaps = 2/94 (2%) Strand = Plus / Minus Query: 413 ttgcttttggtgctcgtaggaacaagtatgttgttgaggatta--gttctttttgttgcc 470 ||||||||||||||||||||||||||||||||| ||||||||| || | ||||| |||| Sbjct: 130264 ttgcttttggtgctcgtaggaacaagtatgttgctgaggattagtgtccgttttgctgcc 130205 Query: 471 atcttccaaccatgaagagaactaggaacatttt 504 ||||| ||||| |||||||||||||| ||||||| Sbjct: 130204 atcttacaaccctgaagagaactagggacatttt 130171 >gb|AC138004.3| Oryza sativa chromosome 3 BAC OSJNBb0023J24 genomic sequence, complete sequence Length = 130193 Score = 145 bits (73), Expect = 2e-31 Identities = 103/113 (91%) Strand = Plus / Plus Query: 296 aggttgcagattaccttgttccaaacataagagcaatccctaccaaccaatccatgaaac 355 ||||||| ||||| || ||||||||||| |||||||| ||||| ||||| |||||||||| Sbjct: 68271 aggttgcggattatctcgttccaaacatcagagcaatacctactaaccagtccatgaaac 68330 Query: 356 caacctacattcactttctcacaggcttgaaagcctactccagaatattttca 408 |||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 68331 caacctacatccgttttctcacaggcttgaaagcctactccagaatattttca 68383 Score = 109 bits (55), Expect = 1e-20 Identities = 85/94 (90%), Gaps = 2/94 (2%) Strand = Plus / Plus Query: 413 ttgcttttggtgctcgtaggaacaagtatgttgttgaggatta--gttctttttgttgcc 470 ||||||||||||||||||||||||||||||||| ||||||||| || | ||||| |||| Sbjct: 68483 ttgcttttggtgctcgtaggaacaagtatgttgctgaggattagtgtccgttttgctgcc 68542 Query: 471 atcttccaaccatgaagagaactaggaacatttt 504 ||||| ||||| |||||||||||||| ||||||| Sbjct: 68543 atcttacaaccctgaagagaactagggacatttt 68576 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 145 bits (73), Expect = 2e-31 Identities = 103/113 (91%) Strand = Plus / Minus Query: 296 aggttgcagattaccttgttccaaacataagagcaatccctaccaaccaatccatgaaac 355 ||||||| ||||| || ||||||||||| |||||||| ||||| ||||| |||||||||| Sbjct: 25325809 aggttgcggattatctcgttccaaacatcagagcaatacctactaaccagtccatgaaac 25325750 Query: 356 caacctacattcactttctcacaggcttgaaagcctactccagaatattttca 408 |||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 25325749 caacctacatccgttttctcacaggcttgaaagcctactccagaatattttca 25325697 Score = 109 bits (55), Expect = 1e-20 Identities = 85/94 (90%), Gaps = 2/94 (2%) Strand = Plus / Minus Query: 413 ttgcttttggtgctcgtaggaacaagtatgttgttgaggatta--gttctttttgttgcc 470 ||||||||||||||||||||||||||||||||| ||||||||| || | ||||| |||| Sbjct: 25325597 ttgcttttggtgctcgtaggaacaagtatgttgctgaggattagtgtccgttttgctgcc 25325538 Query: 471 atcttccaaccatgaagagaactaggaacatttt 504 ||||| ||||| |||||||||||||| ||||||| Sbjct: 25325537 atcttacaaccctgaagagaactagggacatttt 25325504