BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst011i01 (1053 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001067565.1| Oryza sativa (japonica cultivar-group) Os08g... 244 6e-61 dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 244 6e-61 dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic D... 244 6e-61 dbj|AK108144.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 6e-61 gb|AY108456.1| Zea mays PCO091049 mRNA sequence 103 1e-18 >ref|NM_001067565.1| Oryza sativa (japonica cultivar-group) Os08g0157400 (Os08g0157400) mRNA, complete cds Length = 1223 Score = 244 bits (123), Expect = 6e-61 Identities = 215/245 (87%), Gaps = 3/245 (1%) Strand = Plus / Plus Query: 289 gccggcggccatcaaggcccggctccccgccgtccggtacgccgacttcaagagg---cg 345 |||||| ||||||||||| || |||||||||||||| |||||||||||| ||| || Sbjct: 317 gccggccgccatcaaggcgcgcctccccgccgtccgctacgccgacttcgtcaggtgccg 376 Query: 346 gcgcgccggggcggcggcgccggccgtgtgcgccgtgtgcctgggcgcgctcgaggagcg 405 ||||||| |||||||| |||| ||||| ||||||||| ||||||||||||| ||| Sbjct: 377 ccgcgccgccgcggcggccgcggcgtcgtgcgtcgtgtgcctcggcgcgctcgaggcgcg 436 Query: 406 gcaccgcgtccgcgagctcggcaactgcgcgcacgccttccacaaggcgtgcatcgacaa 465 ||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 437 tcaccgggtgcgcgagctcggcaactgcgcgcacgcgttccacaaggcgtgcatcgacaa 496 Query: 466 gtgggtcgacaagggccaggccacctgccccctctgccgcgccctcctcctccccgacgc 525 |||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||| Sbjct: 497 gtgggtcgacaagggccaggccacctgcccgctctgccgcgccgccctcctcccctccgc 556 Query: 526 cgacg 530 ||||| Sbjct: 557 cgacg 561 Score = 163 bits (82), Expect = 2e-36 Identities = 121/134 (90%) Strand = Plus / Plus Query: 54 cggccatggggttcccgtcggtgtgctactgcgtcatcctgccgcagccgctcatcctgg 113 |||| ||||||||||||||||||||||||||||| || |||||||||||||| | |||| Sbjct: 82 cggcgatggggttcccgtcggtgtgctactgcgtgatactgccgcagccgctggtgctgg 141 Query: 114 tgctgcagctgctcgacttactccggcacgccttcctgctctgcctctcgtcgctcggcc 173 ||||||||||||||||| | || || ||||||||||||||||||||||| ||||||||| Sbjct: 142 tgctgcagctgctcgacctgctgcgccacgccttcctgctctgcctctccgcgctcggcc 201 Query: 174 tcgcggcgccgccg 187 |||| ||||||||| Sbjct: 202 tcgccgcgccgccg 215 Score = 93.7 bits (47), Expect = 1e-15 Identities = 59/63 (93%) Strand = Plus / Plus Query: 732 gtggtggagtattcttggtcggtgaggcactaattatgaggaggacagggatggctacct 791 |||| |||||||| ||||| ||||||||||||||||||||||||||| |||||||||||| Sbjct: 815 gtggaggagtattattggtaggtgaggcactaattatgaggaggacaaggatggctacct 874 Query: 792 gca 794 ||| Sbjct: 875 gca 877 >dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 244 bits (123), Expect = 6e-61 Identities = 215/245 (87%), Gaps = 3/245 (1%) Strand = Plus / Minus Query: 289 gccggcggccatcaaggcccggctccccgccgtccggtacgccgacttcaagagg---cg 345 |||||| ||||||||||| || |||||||||||||| |||||||||||| ||| || Sbjct: 3320921 gccggccgccatcaaggcgcgcctccccgccgtccgctacgccgacttcgtcaggtgccg 3320862 Query: 346 gcgcgccggggcggcggcgccggccgtgtgcgccgtgtgcctgggcgcgctcgaggagcg 405 ||||||| |||||||| |||| ||||| ||||||||| ||||||||||||| ||| Sbjct: 3320861 ccgcgccgccgcggcggccgcggcgtcgtgcgtcgtgtgcctcggcgcgctcgaggcgcg 3320802 Query: 406 gcaccgcgtccgcgagctcggcaactgcgcgcacgccttccacaaggcgtgcatcgacaa 465 ||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 3320801 tcaccgggtgcgcgagctcggcaactgcgcgcacgcgttccacaaggcgtgcatcgacaa 3320742 Query: 466 gtgggtcgacaagggccaggccacctgccccctctgccgcgccctcctcctccccgacgc 525 |||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||| Sbjct: 3320741 gtgggtcgacaagggccaggccacctgcccgctctgccgcgccgccctcctcccctccgc 3320682 Query: 526 cgacg 530 ||||| Sbjct: 3320681 cgacg 3320677 Score = 163 bits (82), Expect = 2e-36 Identities = 121/134 (90%) Strand = Plus / Minus Query: 54 cggccatggggttcccgtcggtgtgctactgcgtcatcctgccgcagccgctcatcctgg 113 |||| ||||||||||||||||||||||||||||| || |||||||||||||| | |||| Sbjct: 3321156 cggcgatggggttcccgtcggtgtgctactgcgtgatactgccgcagccgctggtgctgg 3321097 Query: 114 tgctgcagctgctcgacttactccggcacgccttcctgctctgcctctcgtcgctcggcc 173 ||||||||||||||||| | || || ||||||||||||||||||||||| ||||||||| Sbjct: 3321096 tgctgcagctgctcgacctgctgcgccacgccttcctgctctgcctctccgcgctcggcc 3321037 Query: 174 tcgcggcgccgccg 187 |||| ||||||||| Sbjct: 3321036 tcgccgcgccgccg 3321023 Score = 93.7 bits (47), Expect = 1e-15 Identities = 59/63 (93%) Strand = Plus / Minus Query: 732 gtggtggagtattcttggtcggtgaggcactaattatgaggaggacagggatggctacct 791 |||| |||||||| ||||| ||||||||||||||||||||||||||| |||||||||||| Sbjct: 3320423 gtggaggagtattattggtaggtgaggcactaattatgaggaggacaaggatggctacct 3320364 Query: 792 gca 794 ||| Sbjct: 3320363 gca 3320361 >dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0438H08 Length = 148626 Score = 244 bits (123), Expect = 6e-61 Identities = 215/245 (87%), Gaps = 3/245 (1%) Strand = Plus / Minus Query: 289 gccggcggccatcaaggcccggctccccgccgtccggtacgccgacttcaagagg---cg 345 |||||| ||||||||||| || |||||||||||||| |||||||||||| ||| || Sbjct: 98488 gccggccgccatcaaggcgcgcctccccgccgtccgctacgccgacttcgtcaggtgccg 98429 Query: 346 gcgcgccggggcggcggcgccggccgtgtgcgccgtgtgcctgggcgcgctcgaggagcg 405 ||||||| |||||||| |||| ||||| ||||||||| ||||||||||||| ||| Sbjct: 98428 ccgcgccgccgcggcggccgcggcgtcgtgcgtcgtgtgcctcggcgcgctcgaggcgcg 98369 Query: 406 gcaccgcgtccgcgagctcggcaactgcgcgcacgccttccacaaggcgtgcatcgacaa 465 ||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 98368 tcaccgggtgcgcgagctcggcaactgcgcgcacgcgttccacaaggcgtgcatcgacaa 98309 Query: 466 gtgggtcgacaagggccaggccacctgccccctctgccgcgccctcctcctccccgacgc 525 |||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||| Sbjct: 98308 gtgggtcgacaagggccaggccacctgcccgctctgccgcgccgccctcctcccctccgc 98249 Query: 526 cgacg 530 ||||| Sbjct: 98248 cgacg 98244 Score = 163 bits (82), Expect = 2e-36 Identities = 121/134 (90%) Strand = Plus / Minus Query: 54 cggccatggggttcccgtcggtgtgctactgcgtcatcctgccgcagccgctcatcctgg 113 |||| ||||||||||||||||||||||||||||| || |||||||||||||| | |||| Sbjct: 98723 cggcgatggggttcccgtcggtgtgctactgcgtgatactgccgcagccgctggtgctgg 98664 Query: 114 tgctgcagctgctcgacttactccggcacgccttcctgctctgcctctcgtcgctcggcc 173 ||||||||||||||||| | || || ||||||||||||||||||||||| ||||||||| Sbjct: 98663 tgctgcagctgctcgacctgctgcgccacgccttcctgctctgcctctccgcgctcggcc 98604 Query: 174 tcgcggcgccgccg 187 |||| ||||||||| Sbjct: 98603 tcgccgcgccgccg 98590 Score = 93.7 bits (47), Expect = 1e-15 Identities = 59/63 (93%) Strand = Plus / Minus Query: 732 gtggtggagtattcttggtcggtgaggcactaattatgaggaggacagggatggctacct 791 |||| |||||||| ||||| ||||||||||||||||||||||||||| |||||||||||| Sbjct: 97990 gtggaggagtattattggtaggtgaggcactaattatgaggaggacaaggatggctacct 97931 Query: 792 gca 794 ||| Sbjct: 97930 gca 97928 >dbj|AK108144.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-E12, full insert sequence Length = 1223 Score = 244 bits (123), Expect = 6e-61 Identities = 215/245 (87%), Gaps = 3/245 (1%) Strand = Plus / Plus Query: 289 gccggcggccatcaaggcccggctccccgccgtccggtacgccgacttcaagagg---cg 345 |||||| ||||||||||| || |||||||||||||| |||||||||||| ||| || Sbjct: 317 gccggccgccatcaaggcgcgcctccccgccgtccgctacgccgacttcgtcaggtgccg 376 Query: 346 gcgcgccggggcggcggcgccggccgtgtgcgccgtgtgcctgggcgcgctcgaggagcg 405 ||||||| |||||||| |||| ||||| ||||||||| ||||||||||||| ||| Sbjct: 377 ccgcgccgccgcggcggccgcggcgtcgtgcgtcgtgtgcctcggcgcgctcgaggcgcg 436 Query: 406 gcaccgcgtccgcgagctcggcaactgcgcgcacgccttccacaaggcgtgcatcgacaa 465 ||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 437 tcaccgggtgcgcgagctcggcaactgcgcgcacgcgttccacaaggcgtgcatcgacaa 496 Query: 466 gtgggtcgacaagggccaggccacctgccccctctgccgcgccctcctcctccccgacgc 525 |||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||| Sbjct: 497 gtgggtcgacaagggccaggccacctgcccgctctgccgcgccgccctcctcccctccgc 556 Query: 526 cgacg 530 ||||| Sbjct: 557 cgacg 561 Score = 163 bits (82), Expect = 2e-36 Identities = 121/134 (90%) Strand = Plus / Plus Query: 54 cggccatggggttcccgtcggtgtgctactgcgtcatcctgccgcagccgctcatcctgg 113 |||| ||||||||||||||||||||||||||||| || |||||||||||||| | |||| Sbjct: 82 cggcgatggggttcccgtcggtgtgctactgcgtgatactgccgcagccgctggtgctgg 141 Query: 114 tgctgcagctgctcgacttactccggcacgccttcctgctctgcctctcgtcgctcggcc 173 ||||||||||||||||| | || || ||||||||||||||||||||||| ||||||||| Sbjct: 142 tgctgcagctgctcgacctgctgcgccacgccttcctgctctgcctctccgcgctcggcc 201 Query: 174 tcgcggcgccgccg 187 |||| ||||||||| Sbjct: 202 tcgccgcgccgccg 215 Score = 93.7 bits (47), Expect = 1e-15 Identities = 59/63 (93%) Strand = Plus / Plus Query: 732 gtggtggagtattcttggtcggtgaggcactaattatgaggaggacagggatggctacct 791 |||| |||||||| ||||| ||||||||||||||||||||||||||| |||||||||||| Sbjct: 815 gtggaggagtattattggtaggtgaggcactaattatgaggaggacaaggatggctacct 874 Query: 792 gca 794 ||| Sbjct: 875 gca 877 >gb|AY108456.1| Zea mays PCO091049 mRNA sequence Length = 753 Score = 103 bits (52), Expect = 1e-18 Identities = 67/72 (93%) Strand = Plus / Plus Query: 732 gtggtggagtattcttggtcggtgaggcactaattatgaggaggacagggatggctacct 791 |||||| |||||| ||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 409 gtggtgcagtattattggtaggtgaggcacaaattatgaggaggacagggatggctacct 468 Query: 792 gcattcgatctg 803 ||||| |||||| Sbjct: 469 gcattggatctg 480