BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst011g01 (647 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001054650.1| Oryza sativa (japonica cultivar-group) Os02g... 214 3e-52 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 214 3e-52 dbj|AP005733.3| Oryza sativa (japonica cultivar-group) genomic D... 214 3e-52 dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic D... 214 3e-52 dbj|AK068818.1| Oryza sativa (japonica cultivar-group) cDNA clon... 214 3e-52 >ref|NM_001054650.1| Oryza sativa (japonica cultivar-group) Os02g0747400 (Os02g0747400) mRNA, complete cds Length = 2229 Score = 214 bits (108), Expect = 3e-52 Identities = 246/291 (84%), Gaps = 12/291 (4%) Strand = Plus / Plus Query: 1 cgttcccgcagatgggcagcgccggtgccgcggctgccgtgtatcgggggagcgtgccga 60 |||||||||||||| ||||||||| || || || |||||||| ||||||||||| |||| Sbjct: 1487 cgttcccgcagatgagcagcgccgccgcggccgccgccgtgtaccgggggagcgttccga 1546 Query: 61 gcgggctacatttcatgaactttccggcgccgatggcgctgctacccgggcagcagctgg 120 |||||||||||||||||||||| || || ||||||||||| ||||| || |||||||||| Sbjct: 1547 gcgggctacatttcatgaacttccctgcaccgatggcgctcctaccgggacagcagctgg 1606 Query: 121 gtctcggcccagtggta---ggcagtggcgctggcggaggc---gaagggcacatgggga 174 | ||||||||||| | | ||| |||||| ||| |||||| || ||||||||||||| Sbjct: 1607 ggctcggcccagttggaggcggcggtggcggtggaggaggcggggaggggcacatgggga 1666 Query: 175 tcctcgccgcgctcaatgcgtaccggacacaggcggctacggatgccgc------ggcag 228 |||| ||||| |||||||| ||||||||||||||||| ||||||||||| | || Sbjct: 1667 tccttgccgccctcaatgcttaccggacacaggcggcgacggatgccgccggtcagcaag 1726 Query: 229 gccaaggcggaggaggaggaggttctagccagcagcaacacggcggcggcg 279 || ||| ||||| |||||||| |||||||||||||||||||| ||||||| Sbjct: 1727 gcggaggaggaggtggaggaggatctagccagcagcaacacggaggcggcg 1777 Score = 77.8 bits (39), Expect = 5e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 269 cggcggcggcgagcggcatgagagcatgagcaccagcgactcgtagg 315 ||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 1779 cggcggcggcgagcggcatcagagcataagcaccagcgactcgtagg 1825 >dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 214 bits (108), Expect = 3e-52 Identities = 246/291 (84%), Gaps = 12/291 (4%) Strand = Plus / Plus Query: 1 cgttcccgcagatgggcagcgccggtgccgcggctgccgtgtatcgggggagcgtgccga 60 |||||||||||||| ||||||||| || || || |||||||| ||||||||||| |||| Sbjct: 31416751 cgttcccgcagatgagcagcgccgccgcggccgccgccgtgtaccgggggagcgttccga 31416810 Query: 61 gcgggctacatttcatgaactttccggcgccgatggcgctgctacccgggcagcagctgg 120 |||||||||||||||||||||| || || ||||||||||| ||||| || |||||||||| Sbjct: 31416811 gcgggctacatttcatgaacttccctgcaccgatggcgctcctaccgggacagcagctgg 31416870 Query: 121 gtctcggcccagtggta---ggcagtggcgctggcggaggc---gaagggcacatgggga 174 | ||||||||||| | | ||| |||||| ||| |||||| || ||||||||||||| Sbjct: 31416871 ggctcggcccagttggaggcggcggtggcggtggaggaggcggggaggggcacatgggga 31416930 Query: 175 tcctcgccgcgctcaatgcgtaccggacacaggcggctacggatgccgc------ggcag 228 |||| ||||| |||||||| ||||||||||||||||| ||||||||||| | || Sbjct: 31416931 tccttgccgccctcaatgcttaccggacacaggcggcgacggatgccgccggtcagcaag 31416990 Query: 229 gccaaggcggaggaggaggaggttctagccagcagcaacacggcggcggcg 279 || ||| ||||| |||||||| |||||||||||||||||||| ||||||| Sbjct: 31416991 gcggaggaggaggtggaggaggatctagccagcagcaacacggaggcggcg 31417041 Score = 77.8 bits (39), Expect = 5e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 269 cggcggcggcgagcggcatgagagcatgagcaccagcgactcgtagg 315 ||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 31417043 cggcggcggcgagcggcatcagagcataagcaccagcgactcgtagg 31417089 >dbj|AP005733.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0024K03 Length = 119796 Score = 214 bits (108), Expect = 3e-52 Identities = 246/291 (84%), Gaps = 12/291 (4%) Strand = Plus / Plus Query: 1 cgttcccgcagatgggcagcgccggtgccgcggctgccgtgtatcgggggagcgtgccga 60 |||||||||||||| ||||||||| || || || |||||||| ||||||||||| |||| Sbjct: 99325 cgttcccgcagatgagcagcgccgccgcggccgccgccgtgtaccgggggagcgttccga 99384 Query: 61 gcgggctacatttcatgaactttccggcgccgatggcgctgctacccgggcagcagctgg 120 |||||||||||||||||||||| || || ||||||||||| ||||| || |||||||||| Sbjct: 99385 gcgggctacatttcatgaacttccctgcaccgatggcgctcctaccgggacagcagctgg 99444 Query: 121 gtctcggcccagtggta---ggcagtggcgctggcggaggc---gaagggcacatgggga 174 | ||||||||||| | | ||| |||||| ||| |||||| || ||||||||||||| Sbjct: 99445 ggctcggcccagttggaggcggcggtggcggtggaggaggcggggaggggcacatgggga 99504 Query: 175 tcctcgccgcgctcaatgcgtaccggacacaggcggctacggatgccgc------ggcag 228 |||| ||||| |||||||| ||||||||||||||||| ||||||||||| | || Sbjct: 99505 tccttgccgccctcaatgcttaccggacacaggcggcgacggatgccgccggtcagcaag 99564 Query: 229 gccaaggcggaggaggaggaggttctagccagcagcaacacggcggcggcg 279 || ||| ||||| |||||||| |||||||||||||||||||| ||||||| Sbjct: 99565 gcggaggaggaggtggaggaggatctagccagcagcaacacggaggcggcg 99615 Score = 77.8 bits (39), Expect = 5e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 269 cggcggcggcgagcggcatgagagcatgagcaccagcgactcgtagg 315 ||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 99617 cggcggcggcgagcggcatcagagcataagcaccagcgactcgtagg 99663 >dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0078N11 Length = 155168 Score = 214 bits (108), Expect = 3e-52 Identities = 246/291 (84%), Gaps = 12/291 (4%) Strand = Plus / Plus Query: 1 cgttcccgcagatgggcagcgccggtgccgcggctgccgtgtatcgggggagcgtgccga 60 |||||||||||||| ||||||||| || || || |||||||| ||||||||||| |||| Sbjct: 52148 cgttcccgcagatgagcagcgccgccgcggccgccgccgtgtaccgggggagcgttccga 52207 Query: 61 gcgggctacatttcatgaactttccggcgccgatggcgctgctacccgggcagcagctgg 120 |||||||||||||||||||||| || || ||||||||||| ||||| || |||||||||| Sbjct: 52208 gcgggctacatttcatgaacttccctgcaccgatggcgctcctaccgggacagcagctgg 52267 Query: 121 gtctcggcccagtggta---ggcagtggcgctggcggaggc---gaagggcacatgggga 174 | ||||||||||| | | ||| |||||| ||| |||||| || ||||||||||||| Sbjct: 52268 ggctcggcccagttggaggcggcggtggcggtggaggaggcggggaggggcacatgggga 52327 Query: 175 tcctcgccgcgctcaatgcgtaccggacacaggcggctacggatgccgc------ggcag 228 |||| ||||| |||||||| ||||||||||||||||| ||||||||||| | || Sbjct: 52328 tccttgccgccctcaatgcttaccggacacaggcggcgacggatgccgccggtcagcaag 52387 Query: 229 gccaaggcggaggaggaggaggttctagccagcagcaacacggcggcggcg 279 || ||| ||||| |||||||| |||||||||||||||||||| ||||||| Sbjct: 52388 gcggaggaggaggtggaggaggatctagccagcagcaacacggaggcggcg 52438 Score = 77.8 bits (39), Expect = 5e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 269 cggcggcggcgagcggcatgagagcatgagcaccagcgactcgtagg 315 ||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 52440 cggcggcggcgagcggcatcagagcataagcaccagcgactcgtagg 52486 >dbj|AK068818.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013163F23, full insert sequence Length = 2228 Score = 214 bits (108), Expect = 3e-52 Identities = 246/291 (84%), Gaps = 12/291 (4%) Strand = Plus / Plus Query: 1 cgttcccgcagatgggcagcgccggtgccgcggctgccgtgtatcgggggagcgtgccga 60 |||||||||||||| ||||||||| || || || |||||||| ||||||||||| |||| Sbjct: 1486 cgttcccgcagatgagcagcgccgccgcggccgccgccgtgtaccgggggagcgttccga 1545 Query: 61 gcgggctacatttcatgaactttccggcgccgatggcgctgctacccgggcagcagctgg 120 |||||||||||||||||||||| || || ||||||||||| ||||| || |||||||||| Sbjct: 1546 gcgggctacatttcatgaacttccctgcaccgatggcgctcctaccgggacagcagctgg 1605 Query: 121 gtctcggcccagtggta---ggcagtggcgctggcggaggc---gaagggcacatgggga 174 | ||||||||||| | | ||| |||||| ||| |||||| || ||||||||||||| Sbjct: 1606 ggctcggcccagttggaggcggcggtggcggtggaggaggcggggaggggcacatgggga 1665 Query: 175 tcctcgccgcgctcaatgcgtaccggacacaggcggctacggatgccgc------ggcag 228 |||| ||||| |||||||| ||||||||||||||||| ||||||||||| | || Sbjct: 1666 tccttgccgccctcaatgcttaccggacacaggcggcgacggatgccgccggtcagcaag 1725 Query: 229 gccaaggcggaggaggaggaggttctagccagcagcaacacggcggcggcg 279 || ||| ||||| |||||||| |||||||||||||||||||| ||||||| Sbjct: 1726 gcggaggaggaggtggaggaggatctagccagcagcaacacggaggcggcg 1776 Score = 77.8 bits (39), Expect = 5e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 269 cggcggcggcgagcggcatgagagcatgagcaccagcgactcgtagg 315 ||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 1778 cggcggcggcgagcggcatcagagcataagcaccagcgactcgtagg 1824