BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst011d13 (763 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001073003.1| Oryza sativa (japonica cultivar-group) Os12g... 165 3e-37 dbj|AK101424.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 3e-37 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 159 2e-35 emb|AL732646.5|CNS08C9L Oryza sativa chromosome 12, . BAC OSJNBb... 159 2e-35 ref|NM_001073004.1| Oryza sativa (japonica cultivar-group) Os12g... 121 4e-24 >ref|NM_001073003.1| Oryza sativa (japonica cultivar-group) Os12g0239000 (Os12g0239000) mRNA, complete cds Length = 4392 Score = 165 bits (83), Expect = 3e-37 Identities = 179/211 (84%) Strand = Plus / Plus Query: 46 gatgaaggaccgaggaaacaaattgagagatgtttcactttagaagaggctaccgagaca 105 ||||||||| |||||||||| || ||||||| |||||||||||||||||||| || ||| Sbjct: 3673 gatgaaggaaggaggaaacaatttcagagatgcttcactttagaagaggctacggataca 3732 Query: 106 attcttttctgtagttccattgttcatgacctttcgtacaaggctgcaacaattggactg 165 ||||| || ||||||||||||||||||||||| | ||||||||||||||| |||||||| Sbjct: 3733 attctcttttgtagttccattgttcatgacctagcatacaaggctgcaacagttggactg 3792 Query: 166 gagcacgagcaggaatctgaacttgctggtgcacctcgaccaacagctaccatattagga 225 |||| ||||||||| ||||| | ||| ||| ||||||||||||| ||||| ||| | Sbjct: 3793 gagcgagagcaggaagctgaattcgctcatgcccctcgaccaacagtgaccatggtagaa 3852 Query: 226 aagtccatccaaagggaggatggtttattga 256 || | ||| | |||||| |||||||| |||| Sbjct: 3853 aaattcattccaagggaagatggtttgttga 3883 Score = 123 bits (62), Expect = 1e-24 Identities = 100/112 (89%), Gaps = 3/112 (2%) Strand = Plus / Plus Query: 340 gaagtaattactaaagatcctgtacctgttcgttcttcttctgaaattacaaggacatct 399 ||||||||||||||||| || | |||||| |||||||||||||||||||| | ||| | Sbjct: 3973 gaagtaattactaaagagccagcacctgtacgttcttcttctgaaattacta---cattt 4029 Query: 400 gatagcataaagcctccaaagatggaatcgaagtgcaactgcacaattatgt 451 |||||| | ||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 4030 gatagcttgaagcctccaaagatggagtcgaagtgcaactgcacaattatgt 4081 >dbj|AK101424.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033038E12, full insert sequence Length = 4394 Score = 165 bits (83), Expect = 3e-37 Identities = 179/211 (84%) Strand = Plus / Plus Query: 46 gatgaaggaccgaggaaacaaattgagagatgtttcactttagaagaggctaccgagaca 105 ||||||||| |||||||||| || ||||||| |||||||||||||||||||| || ||| Sbjct: 3675 gatgaaggaaggaggaaacaatttcagagatgcttcactttagaagaggctacggataca 3734 Query: 106 attcttttctgtagttccattgttcatgacctttcgtacaaggctgcaacaattggactg 165 ||||| || ||||||||||||||||||||||| | ||||||||||||||| |||||||| Sbjct: 3735 attctcttttgtagttccattgttcatgacctagcatacaaggctgcaacagttggactg 3794 Query: 166 gagcacgagcaggaatctgaacttgctggtgcacctcgaccaacagctaccatattagga 225 |||| ||||||||| ||||| | ||| ||| ||||||||||||| ||||| ||| | Sbjct: 3795 gagcgagagcaggaagctgaattcgctcatgcccctcgaccaacagtgaccatggtagaa 3854 Query: 226 aagtccatccaaagggaggatggtttattga 256 || | ||| | |||||| |||||||| |||| Sbjct: 3855 aaattcattccaagggaagatggtttgttga 3885 Score = 123 bits (62), Expect = 1e-24 Identities = 100/112 (89%), Gaps = 3/112 (2%) Strand = Plus / Plus Query: 340 gaagtaattactaaagatcctgtacctgttcgttcttcttctgaaattacaaggacatct 399 ||||||||||||||||| || | |||||| |||||||||||||||||||| | ||| | Sbjct: 3975 gaagtaattactaaagagccagcacctgtacgttcttcttctgaaattacta---cattt 4031 Query: 400 gatagcataaagcctccaaagatggaatcgaagtgcaactgcacaattatgt 451 |||||| | ||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 4032 gatagcttgaagcctccaaagatggagtcgaagtgcaactgcacaattatgt 4083 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 159 bits (80), Expect = 2e-35 Identities = 170/200 (85%) Strand = Plus / Minus Query: 57 gaggaaacaaattgagagatgtttcactttagaagaggctaccgagacaattcttttctg 116 |||||||||| || ||||||| |||||||||||||||||||| || |||||||| || || Sbjct: 7678437 gaggaaacaatttcagagatgcttcactttagaagaggctacggatacaattctcttttg 7678378 Query: 117 tagttccattgttcatgacctttcgtacaaggctgcaacaattggactggagcacgagca 176 ||||||||||||||||||||| | ||||||||||||||| |||||||||||| ||||| Sbjct: 7678377 tagttccattgttcatgacctagcatacaaggctgcaacagttggactggagcgagagca 7678318 Query: 177 ggaatctgaacttgctggtgcacctcgaccaacagctaccatattaggaaagtccatcca 236 |||| ||||| | ||| ||| ||||||||||||| ||||| ||| ||| | ||| | Sbjct: 7678317 ggaagctgaattcgctcatgcccctcgaccaacagtgaccatggtagaaaaattcattcc 7678258 Query: 237 aagggaggatggtttattga 256 |||||| |||||||| |||| Sbjct: 7678257 aagggaagatggtttgttga 7678238 Score = 123 bits (62), Expect = 1e-24 Identities = 100/112 (89%), Gaps = 3/112 (2%) Strand = Plus / Minus Query: 340 gaagtaattactaaagatcctgtacctgttcgttcttcttctgaaattacaaggacatct 399 ||||||||||||||||| || | |||||| |||||||||||||||||||| | ||| | Sbjct: 7678148 gaagtaattactaaagagccagcacctgtacgttcttcttctgaaattacta---cattt 7678092 Query: 400 gatagcataaagcctccaaagatggaatcgaagtgcaactgcacaattatgt 451 |||||| | ||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 7678091 gatagcttgaagcctccaaagatggagtcgaagtgcaactgcacaattatgt 7678040 Score = 121 bits (61), Expect = 4e-24 Identities = 115/133 (86%) Strand = Plus / Minus Query: 48 tgaaggaccgaggaaacaaattgagagatgtttcactttagaagaggctaccgagacaat 107 ||||||| |||||||| ||||| ||||||| |||||||| ||||| |||||||| ||||| Sbjct: 7688753 tgaaggatcgaggaaagaaattcagagatgcttcactttggaagaagctaccgatacaat 7688694 Query: 108 tcttttctgtagttccattgttcatgacctttcgtacaaggctgcaacaattggactgga 167 ||| |||| ||||| ||||||||||||||| | |||||||| || ||||||| |||||| Sbjct: 7688693 tctcctctgcagttctattgttcatgaccttgcatacaaggcagcgacaattgcactgga 7688634 Query: 168 gcacgagcaggaa 180 || ||||||||| Sbjct: 7688633 ccatgagcaggaa 7688621 Score = 101 bits (51), Expect = 4e-18 Identities = 78/87 (89%) Strand = Plus / Minus Query: 370 cgttcttcttctgaaattacaaggacatctgatagcataaagcctccaaagatggaatcg 429 ||||| ||||||| |||||||||||||||||| ||||| ||||||||||| ||||||| Sbjct: 7688425 cgttcctcttctggaattacaaggacatctgagagcatgaagcctccaaaactggaatcc 7688366 Query: 430 aagtgcaactgcacaattatgtaagtt 456 ||||||||||| | ||||||||||||| Sbjct: 7688365 aagtgcaactgtataattatgtaagtt 7688339 Score = 77.8 bits (39), Expect = 6e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 223 ggaaagtccatccaaagggaggatggtttattgaagttgcctcacagaaaaacaccaaaa 282 |||||||| || | || ||||||||||||| | ||| || |||||||| ||| || || Sbjct: 7688578 ggaaagtctattccaaaggaggatggtttacttaagctgactcacagacgaacgcctaac 7688519 Query: 283 cgtaaggttaaaaagaaaagattggaaggtgaaac 317 ||||||||||||| ||||||||||||||||||||| Sbjct: 7688518 cgtaaggttaaaaggaaaagattggaaggtgaaac 7688484 >emb|AL732646.5|CNS08C9L Oryza sativa chromosome 12, . BAC OSJNBb0001P17 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151024 Score = 159 bits (80), Expect = 2e-35 Identities = 170/200 (85%) Strand = Plus / Minus Query: 57 gaggaaacaaattgagagatgtttcactttagaagaggctaccgagacaattcttttctg 116 |||||||||| || ||||||| |||||||||||||||||||| || |||||||| || || Sbjct: 65830 gaggaaacaatttcagagatgcttcactttagaagaggctacggatacaattctcttttg 65771 Query: 117 tagttccattgttcatgacctttcgtacaaggctgcaacaattggactggagcacgagca 176 ||||||||||||||||||||| | ||||||||||||||| |||||||||||| ||||| Sbjct: 65770 tagttccattgttcatgacctagcatacaaggctgcaacagttggactggagcgagagca 65711 Query: 177 ggaatctgaacttgctggtgcacctcgaccaacagctaccatattaggaaagtccatcca 236 |||| ||||| | ||| ||| ||||||||||||| ||||| ||| ||| | ||| | Sbjct: 65710 ggaagctgaattcgctcatgcccctcgaccaacagtgaccatggtagaaaaattcattcc 65651 Query: 237 aagggaggatggtttattga 256 |||||| |||||||| |||| Sbjct: 65650 aagggaagatggtttgttga 65631 Score = 123 bits (62), Expect = 1e-24 Identities = 100/112 (89%), Gaps = 3/112 (2%) Strand = Plus / Minus Query: 340 gaagtaattactaaagatcctgtacctgttcgttcttcttctgaaattacaaggacatct 399 ||||||||||||||||| || | |||||| |||||||||||||||||||| | ||| | Sbjct: 65541 gaagtaattactaaagagccagcacctgtacgttcttcttctgaaattacta---cattt 65485 Query: 400 gatagcataaagcctccaaagatggaatcgaagtgcaactgcacaattatgt 451 |||||| | ||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 65484 gatagcttgaagcctccaaagatggagtcgaagtgcaactgcacaattatgt 65433 Score = 121 bits (61), Expect = 4e-24 Identities = 115/133 (86%) Strand = Plus / Minus Query: 48 tgaaggaccgaggaaacaaattgagagatgtttcactttagaagaggctaccgagacaat 107 ||||||| |||||||| ||||| ||||||| |||||||| ||||| |||||||| ||||| Sbjct: 76146 tgaaggatcgaggaaagaaattcagagatgcttcactttggaagaagctaccgatacaat 76087 Query: 108 tcttttctgtagttccattgttcatgacctttcgtacaaggctgcaacaattggactgga 167 ||| |||| ||||| ||||||||||||||| | |||||||| || ||||||| |||||| Sbjct: 76086 tctcctctgcagttctattgttcatgaccttgcatacaaggcagcgacaattgcactgga 76027 Query: 168 gcacgagcaggaa 180 || ||||||||| Sbjct: 76026 ccatgagcaggaa 76014 Score = 101 bits (51), Expect = 4e-18 Identities = 78/87 (89%) Strand = Plus / Minus Query: 370 cgttcttcttctgaaattacaaggacatctgatagcataaagcctccaaagatggaatcg 429 ||||| ||||||| |||||||||||||||||| ||||| ||||||||||| ||||||| Sbjct: 75818 cgttcctcttctggaattacaaggacatctgagagcatgaagcctccaaaactggaatcc 75759 Query: 430 aagtgcaactgcacaattatgtaagtt 456 ||||||||||| | ||||||||||||| Sbjct: 75758 aagtgcaactgtataattatgtaagtt 75732 Score = 77.8 bits (39), Expect = 6e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 223 ggaaagtccatccaaagggaggatggtttattgaagttgcctcacagaaaaacaccaaaa 282 |||||||| || | || ||||||||||||| | ||| || |||||||| ||| || || Sbjct: 75971 ggaaagtctattccaaaggaggatggtttacttaagctgactcacagacgaacgcctaac 75912 Query: 283 cgtaaggttaaaaagaaaagattggaaggtgaaac 317 ||||||||||||| ||||||||||||||||||||| Sbjct: 75911 cgtaaggttaaaaggaaaagattggaaggtgaaac 75877 >ref|NM_001073004.1| Oryza sativa (japonica cultivar-group) Os12g0239200 (Os12g0239200) mRNA, complete cds Length = 4398 Score = 121 bits (61), Expect = 4e-24 Identities = 115/133 (86%) Strand = Plus / Plus Query: 48 tgaaggaccgaggaaacaaattgagagatgtttcactttagaagaggctaccgagacaat 107 ||||||| |||||||| ||||| ||||||| |||||||| ||||| |||||||| ||||| Sbjct: 3636 tgaaggatcgaggaaagaaattcagagatgcttcactttggaagaagctaccgatacaat 3695 Query: 108 tcttttctgtagttccattgttcatgacctttcgtacaaggctgcaacaattggactgga 167 ||| |||| ||||| ||||||||||||||| | |||||||| || ||||||| |||||| Sbjct: 3696 tctcctctgcagttctattgttcatgaccttgcatacaaggcagcgacaattgcactgga 3755 Query: 168 gcacgagcaggaa 180 || ||||||||| Sbjct: 3756 ccatgagcaggaa 3768 Score = 101 bits (51), Expect = 4e-18 Identities = 78/87 (89%) Strand = Plus / Plus Query: 370 cgttcttcttctgaaattacaaggacatctgatagcataaagcctccaaagatggaatcg 429 ||||| ||||||| |||||||||||||||||| ||||| ||||||||||| ||||||| Sbjct: 3964 cgttcctcttctggaattacaaggacatctgagagcatgaagcctccaaaactggaatcc 4023 Query: 430 aagtgcaactgcacaattatgtaagtt 456 ||||||||||| | ||||||||||||| Sbjct: 4024 aagtgcaactgtataattatgtaagtt 4050 Score = 77.8 bits (39), Expect = 6e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 223 ggaaagtccatccaaagggaggatggtttattgaagttgcctcacagaaaaacaccaaaa 282 |||||||| || | || ||||||||||||| | ||| || |||||||| ||| || || Sbjct: 3811 ggaaagtctattccaaaggaggatggtttacttaagctgactcacagacgaacgcctaac 3870 Query: 283 cgtaaggttaaaaagaaaagattggaaggtgaaac 317 ||||||||||||| ||||||||||||||||||||| Sbjct: 3871 cgtaaggttaaaaggaaaagattggaaggtgaaac 3905