BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst011b11
         (747 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NM_001061923.1| Oryza sativa (japonica cultivar-group) Os05g...   103   1e-18
gb|DQ244270.1| Zea mays clone 4043 mRNA sequence                       96   2e-16
emb|CT830779.1| Oryza sativa (indica cultivar-group) cDNA clone:...    90   2e-14
emb|CT828385.1| Oryza sativa (indica cultivar-group) cDNA clone:...    90   2e-14
gb|AY018575.1| Oryza sativa microsatellite MRG0900 containing (A...    88   6e-14

>ref|NM_001061923.1| Oryza sativa (japonica cultivar-group) Os05g0378700 (Os05g0378700)
           mRNA, complete cds
          Length = 201

 Score =  103 bits (52), Expect = 1e-18
 Identities = 61/64 (95%)
 Strand = Plus / Plus

                                                                       
Query: 257 agcttcatcgaaggatgcattgctgcgctctgttgctgctggatctgcgagctgtgctgc 316
           ||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 136 agctttattgaaggatgcattgctgcgctctgttgctgctggctctgcgagctgtgctgc 195

               
Query: 317 gact 320
           ||||
Sbjct: 196 gact 199


>gb|DQ244270.1| Zea mays clone 4043 mRNA sequence
          Length = 735

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 60/64 (93%)
 Strand = Plus / Plus

                                                                       
Query: 258 gcttcatcgaaggatgcattgctgcgctctgttgctgctggatctgcgagctgtgctgcg 317
           ||||||||||||||||||| || |||||||| |||||||||||||||||| |||||||||
Sbjct: 339 gcttcatcgaaggatgcatcgcggcgctctgctgctgctggatctgcgagatgtgctgcg 398

               
Query: 318 acta 321
           ||||
Sbjct: 399 acta 402


>emb|CT830779.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI022N15, full
           insert sequence
          Length = 622

 Score = 89.7 bits (45), Expect = 2e-14
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                       
Query: 258 gcttcatcgaaggatgcattgctgcgctctgttgctgctggatctgcgagctgtgctgcg 317
           ||||||| |||||||| ||||||||||| || |||||||||||||||||| |||||||||
Sbjct: 246 gcttcattgaaggatgtattgctgcgctgtgctgctgctggatctgcgagatgtgctgcg 305

                
Query: 318 actaa 322
           |||||
Sbjct: 306 actaa 310


>emb|CT828385.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI023G08, full
           insert sequence
          Length = 428

 Score = 89.7 bits (45), Expect = 2e-14
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                       
Query: 258 gcttcatcgaaggatgcattgctgcgctctgttgctgctggatctgcgagctgtgctgcg 317
           ||||||| |||||||| ||||||||||| || |||||||||||||||||| |||||||||
Sbjct: 201 gcttcattgaaggatgtattgctgcgctgtgctgctgctggatctgcgagatgtgctgcg 260

                
Query: 318 actaa 322
           |||||
Sbjct: 261 actaa 265


>gb|AY018575.1| Oryza sativa microsatellite MRG0900 containing (AT)X18, closest to
           marker R1436, genomic sequence
          Length = 236

 Score = 87.7 bits (44), Expect = 6e-14
 Identities = 47/48 (97%)
 Strand = Plus / Plus

                                                           
Query: 273 gcattgctgcgctctgttgctgctggatctgcgagctgtgctgcgact 320
           |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 44  gcattgctgcgctctgttgctgctggctctgcgagctgtgctgcgact 91