BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst010m19 (1006 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001065193.1| Oryza sativa (japonica cultivar-group) Os06g... 396 e-107 dbj|AK071566.1| Oryza sativa (japonica cultivar-group) cDNA clon... 396 e-107 emb|CT832292.1| Oryza sativa (indica cultivar-group) cDNA clone:... 389 e-104 gb|AY108742.1| Zea mays PCO080701 mRNA sequence 293 7e-76 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 168 3e-38 >ref|NM_001065193.1| Oryza sativa (japonica cultivar-group) Os06g0730800 (Os06g0730800) mRNA, complete cds Length = 997 Score = 396 bits (200), Expect = e-107 Identities = 349/398 (87%), Gaps = 3/398 (0%) Strand = Plus / Plus Query: 279 taccaggtcctctggatgcacccgaggaggctgtgaaggataatgttagccccactaagg 338 |||||| ||||||||| ||||| |||||||| ||||| || ||| ||||||| | | Sbjct: 247 taccagctcctctggacgcacctgaggaggcctcaaaggagaacattaaccccactgacg 306 Query: 339 agtctgaggaggtcgaagatgatggcagtgacatgccagccatgaagttcagaaactacc 398 | ||||||||||| || ||||||| ||| |||||||||||||||||||||||||||| Sbjct: 307 aatctgaggaggttcaaaatgatgg---tgatatgccagccatgaagttcagaaactacc 363 Query: 399 ttccacatgatgagcaacttcgaggtggtaagctggctcctgtgtctcttccaaagtttg 458 |||| ||||||||||||||||| ||||||||| ||||||| ||||| || |||||||||| Sbjct: 364 ttcctcatgatgagcaacttcggggtggtaaggtggctccagtgtccctcccaaagtttg 423 Query: 459 aagacccaattactgctgaaactgcggaaccaaagcaactcgagaacccttttggaaata 518 | || |||||| ||||||||||| | || ||||||||| | |||||||| |||||||| | Sbjct: 424 aggatccaatttctgctgaaactacagagccaaagcaagttgagaacccctttggaaaca 483 Query: 519 tagctccaaagaatccaaattgggatctgaaacgagacgtgcagaagaggatcaacaaac 578 |||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||| Sbjct: 484 tagctccaaagaatccaaattgggatctgaaaagagatgtgcagaagaggatggacaaac 543 Query: 579 tcgagaagcgcacacagaaagcactggctgagattgcattggagcaacaaagggagaaag 638 | ||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 544 ttgagaagcgcacgcagaaagcactggctgagattgcattggaacaacaaaaggagaaag 603 Query: 639 aagcccttgaggaaggaagcgatgaagctcaagattga 676 |||| |||| |||||||||||||| ||| ||||||||| Sbjct: 604 aagcacttggggaaggaagcgatgcagcccaagattga 641 Score = 79.8 bits (40), Expect = 2e-11 Identities = 67/76 (88%) Strand = Plus / Plus Query: 146 gacgccgccgcccgccgcgagcgcctccgtgccctccgcgcagccaaggagctcctctcc 205 ||||| |||||||||||||||||| | |||||||| ||||| |||||||| ||||||||| Sbjct: 99 gacgctgccgcccgccgcgagcgcttgcgtgcccttcgcgctgccaaggacctcctctcc 158 Query: 206 gcccccgctcccgccg 221 |||||| ||||||| Sbjct: 159 acccccgaccccgccg 174 >dbj|AK071566.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023104M24, full insert sequence Length = 998 Score = 396 bits (200), Expect = e-107 Identities = 349/398 (87%), Gaps = 3/398 (0%) Strand = Plus / Plus Query: 279 taccaggtcctctggatgcacccgaggaggctgtgaaggataatgttagccccactaagg 338 |||||| ||||||||| ||||| |||||||| ||||| || ||| ||||||| | | Sbjct: 248 taccagctcctctggacgcacctgaggaggcctcaaaggagaacattaaccccactgacg 307 Query: 339 agtctgaggaggtcgaagatgatggcagtgacatgccagccatgaagttcagaaactacc 398 | ||||||||||| || ||||||| ||| |||||||||||||||||||||||||||| Sbjct: 308 aatctgaggaggttcaaaatgatgg---tgatatgccagccatgaagttcagaaactacc 364 Query: 399 ttccacatgatgagcaacttcgaggtggtaagctggctcctgtgtctcttccaaagtttg 458 |||| ||||||||||||||||| ||||||||| ||||||| ||||| || |||||||||| Sbjct: 365 ttcctcatgatgagcaacttcggggtggtaaggtggctccagtgtccctcccaaagtttg 424 Query: 459 aagacccaattactgctgaaactgcggaaccaaagcaactcgagaacccttttggaaata 518 | || |||||| ||||||||||| | || ||||||||| | |||||||| |||||||| | Sbjct: 425 aggatccaatttctgctgaaactacagagccaaagcaagttgagaacccctttggaaaca 484 Query: 519 tagctccaaagaatccaaattgggatctgaaacgagacgtgcagaagaggatcaacaaac 578 |||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||| Sbjct: 485 tagctccaaagaatccaaattgggatctgaaaagagatgtgcagaagaggatggacaaac 544 Query: 579 tcgagaagcgcacacagaaagcactggctgagattgcattggagcaacaaagggagaaag 638 | ||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 545 ttgagaagcgcacgcagaaagcactggctgagattgcattggaacaacaaaaggagaaag 604 Query: 639 aagcccttgaggaaggaagcgatgaagctcaagattga 676 |||| |||| |||||||||||||| ||| ||||||||| Sbjct: 605 aagcacttggggaaggaagcgatgcagcccaagattga 642 Score = 79.8 bits (40), Expect = 2e-11 Identities = 67/76 (88%) Strand = Plus / Plus Query: 146 gacgccgccgcccgccgcgagcgcctccgtgccctccgcgcagccaaggagctcctctcc 205 ||||| |||||||||||||||||| | |||||||| ||||| |||||||| ||||||||| Sbjct: 100 gacgctgccgcccgccgcgagcgcttgcgtgcccttcgcgctgccaaggacctcctctcc 159 Query: 206 gcccccgctcccgccg 221 |||||| ||||||| Sbjct: 160 acccccgaccccgccg 175 >emb|CT832292.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA114L09, full insert sequence Length = 906 Score = 389 bits (196), Expect = e-104 Identities = 348/398 (87%), Gaps = 3/398 (0%) Strand = Plus / Plus Query: 279 taccaggtcctctggatgcacccgaggaggctgtgaaggataatgttagccccactaagg 338 |||||| ||||||||| ||||| |||||||| ||||| || ||| ||||||| | | Sbjct: 246 taccagctcctctggacgcacctgaggaggcctcaaaggagaacattaaccccactgacg 305 Query: 339 agtctgaggaggtcgaagatgatggcagtgacatgccagccatgaagttcagaaactacc 398 | ||||||||||| || ||||||| ||| |||||||||||||||||||||||||||| Sbjct: 306 aatctgaggaggttcaaaatgatgg---tgatatgccagccatgaagttcagaaactacc 362 Query: 399 ttccacatgatgagcaacttcgaggtggtaagctggctcctgtgtctcttccaaagtttg 458 |||| ||||||||||||||||| ||||||||| ||||||| ||||| || |||||||||| Sbjct: 363 ttcctcatgatgagcaacttcggggtggtaaggtggctccagtgtccctcccaaagtttg 422 Query: 459 aagacccaattactgctgaaactgcggaaccaaagcaactcgagaacccttttggaaata 518 | || |||||| ||||||||||| | || ||||||||| | |||||||| |||||||| | Sbjct: 423 aggatccaatttctgctgaaactacagagccaaagcaagttgagaacccctttggaaaca 482 Query: 519 tagctccaaagaatccaaattgggatctgaaacgagacgtgcagaagaggatcaacaaac 578 |||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||| Sbjct: 483 tagctccaaagaatccaaattgggatctgaaaagagatgtgcagaagaggatggacaaac 542 Query: 579 tcgagaagcgcacacagaaagcactggctgagattgcattggagcaacaaagggagaaag 638 | ||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 543 ttgagaagcgcacgcagaaagcactggctgagattgcattggaacaacaaaaggagaaag 602 Query: 639 aagcccttgaggaaggaagcgatgaagctcaagattga 676 |||| |||| |||||||||||||| || ||||||||| Sbjct: 603 aagcacttggggaaggaagcgatgcagtccaagattga 640 Score = 79.8 bits (40), Expect = 2e-11 Identities = 67/76 (88%) Strand = Plus / Plus Query: 146 gacgccgccgcccgccgcgagcgcctccgtgccctccgcgcagccaaggagctcctctcc 205 ||||| |||||||||||||||||| | |||||||| ||||| |||||||| ||||||||| Sbjct: 98 gacgctgccgcccgccgcgagcgcttgcgtgcccttcgcgctgccaaggacctcctctcc 157 Query: 206 gcccccgctcccgccg 221 |||||| ||||||| Sbjct: 158 acccccgaccccgccg 173 >gb|AY108742.1| Zea mays PCO080701 mRNA sequence Length = 924 Score = 293 bits (148), Expect = 7e-76 Identities = 318/374 (85%), Gaps = 3/374 (0%) Strand = Plus / Plus Query: 279 taccaggtcctctggatgcacccgaggaggctgtgaaggataatgttagccccactaagg 338 ||||||||| || ||||||||| | ||||||| || || ||| |||||||||| ||| Sbjct: 238 taccaggtcatcaggatgcacctggtgaggctgctaaagaggatggtagccccactgagg 297 Query: 339 agtctgaggaggtcgaagatgatggcagtgacatgccagccatgaagttcagaaactacc 398 || | || ||||| ||||||||||| ||| | ||||||||||||||||||||||||| Sbjct: 298 aggccgaagaggttgaagatgatgg---tgagcttccagccatgaagttcagaaactacc 354 Query: 399 ttccacatgatgagcaacttcgaggtggtaagctggctcctgtgtctcttccaaagtttg 458 |||| |||||||| ||||||||||| || ||||||||||| ||||||||||| ||||||| Sbjct: 355 ttccccatgatgaacaacttcgaggaggcaagctggctccagtgtctcttcccaagtttg 414 Query: 459 aagacccaattactgctgaaactgcggaaccaaagcaactcgagaacccttttggaaata 518 |||||||||||| ||| |||||||| || |||||| || | ||||||| ||||||||| | Sbjct: 415 aagacccaattagtgccgaaactgcagagccaaaggaagtggagaacctttttggaaaca 474 Query: 519 tagctccaaagaatccaaattgggatctgaaacgagacgtgcagaagaggatcaacaaac 578 |||| ||||||||||||||||||||||||||||| || ||||||||||| || | |||| Sbjct: 475 tagcaccaaagaatccaaattgggatctgaaacgtgatgtgcagaagagaattgataaac 534 Query: 579 tcgagaagcgcacacagaaagcactggctgagattgcattggagcaacaaagggagaaag 638 | || | |||||| |||||||| ||||||||||||||||||| || || |||||||| | Sbjct: 535 tggaaaggcgcacgcagaaagcgttggctgagattgcattggaacagcagagggagaagg 594 Query: 639 aagcccttgaggaa 652 ||||| | |||||| Sbjct: 595 aagccttggaggaa 608 Score = 99.6 bits (50), Expect = 2e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 131 atgggcgccgaggaggacgccgccgcccgccgcgagcgcctccgtgccctccgcgcagcc 190 ||||||||||||||||||||||| || ||||||||||| ||||| |||||||| || ||| Sbjct: 84 atgggcgccgaggaggacgccgctgcacgccgcgagcgtctccgcgccctccgtgccgcc 143 Query: 191 aaggagctcctctccgcccccg 212 ||||| ||||||||| |||||| Sbjct: 144 aaggacctcctctccacccccg 165 >dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 168 bits (85), Expect = 3e-38 Identities = 109/117 (93%) Strand = Plus / Plus Query: 501 agaacccttttggaaatatagctccaaagaatccaaattgggatctgaaacgagacgtgc 560 ||||||| |||||||| ||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 30633990 agaacccctttggaaacatagctccaaagaatccaaattgggatctgaaaagagatgtgc 30634049 Query: 561 agaagaggatcaacaaactcgagaagcgcacacagaaagcactggctgagattgcat 617 |||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 30634050 agaagaggatggacaaacttgagaagcgcacgcagaaagcactggctgagattgcat 30634106 Score = 163 bits (82), Expect = 2e-36 Identities = 121/134 (90%) Strand = Plus / Plus Query: 363 gcagtgacatgccagccatgaagttcagaaactaccttccacatgatgagcaacttcgag 422 ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 30633762 gcagtgatatgccagccatgaagttcagaaactaccttcctcatgatgagcaacttcggg 30633821 Query: 423 gtggtaagctggctcctgtgtctcttccaaagtttgaagacccaattactgctgaaactg 482 |||||||| ||||||| ||||| || ||||||||||| || |||||| ||||||||||| Sbjct: 30633822 gtggtaaggtggctccagtgtccctcccaaagtttgaggatccaatttctgctgaaacta 30633881 Query: 483 cggaaccaaagcaa 496 | || ||||||||| Sbjct: 30633882 cagagccaaagcaa 30633895 Score = 79.8 bits (40), Expect = 2e-11 Identities = 67/76 (88%) Strand = Plus / Plus Query: 146 gacgccgccgcccgccgcgagcgcctccgtgccctccgcgcagccaaggagctcctctcc 205 ||||| |||||||||||||||||| | |||||||| ||||| |||||||| ||||||||| Sbjct: 30632154 gacgctgccgcccgccgcgagcgcttgcgtgcccttcgcgctgccaaggacctcctctcc 30632213 Query: 206 gcccccgctcccgccg 221 |||||| ||||||| Sbjct: 30632214 acccccgaccccgccg 30632229