BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst010l12 (930 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001049214.1| Oryza sativa (japonica cultivar-group) Os01g... 254 6e-64 dbj|AK101084.1| Oryza sativa (japonica cultivar-group) cDNA clon... 254 6e-64 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 188 3e-44 dbj|AP001080.1| Oryza sativa (japonica cultivar-group) genomic D... 188 3e-44 dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic D... 188 3e-44 >ref|NM_001049214.1| Oryza sativa (japonica cultivar-group) Os01g0266500 (Os01g0266500) mRNA, complete cds Length = 1159 Score = 254 bits (128), Expect = 6e-64 Identities = 251/290 (86%), Gaps = 9/290 (3%) Strand = Plus / Plus Query: 277 tacgccgtggtggatgccttcgcggtcgagccgttcaagggcaaccccgccgcagtgtgc 336 |||||||||||||| || ||||||| ||||||||||||||||||||||||||| || ||| Sbjct: 102 tacgccgtggtggacgcgttcgcggccgagccgttcaagggcaaccccgccgccgtatgc 161 Query: 337 ctcctcaa---ggaggaggacgccgcgtccgcggacgagcggtggatgcagtccgtcgcc 393 ||||| | |||||| | ||| ||| | ||||||||||||||||||||||||||||| Sbjct: 162 ctcctggaaggggaggatgccgcggcggcggcggacgagcggtggatgcagtccgtcgca 221 Query: 394 gccgagttcaacctctcccagaccgccttcctcgtccgcga---ctcctcctccgccggt 450 |||||||||||||||||| |||||||||||||| ||||||| |||||||||||||| Sbjct: 222 gccgagttcaacctctccgagaccgccttcctcatccgcgacccctcctcctccgccgcc 281 Query: 451 gacgc---ctccaccccgcggttccacctccgctggttcactcccgttgccgaggtcaat 507 | ||| | || |||||||||||| ||||||||||||||| ||||| |||||||| ||| Sbjct: 282 gccgccgacgccgccccgcggttccgcctccgctggttcacccccgtcgccgaggtgaat 341 Query: 508 ctctgcgggcacgcgaaattggcctccgcccacttcctcttcacaaccgt 557 |||||||| ||||||| |||| |||||||||||||||||||| ||||| Sbjct: 342 ctctgcggccacgcgacgctggcatccgcccacttcctcttcaccaccgt 391 Score = 77.8 bits (39), Expect = 7e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 666 gaagctgttcatcgagttggatttccccatgattgatctcgtggagt 712 |||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 518 gaagctgttcatcgagctggatttccccatgatcgatctcgtggagt 564 >dbj|AK101084.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024I08, full insert sequence Length = 1161 Score = 254 bits (128), Expect = 6e-64 Identities = 251/290 (86%), Gaps = 9/290 (3%) Strand = Plus / Plus Query: 277 tacgccgtggtggatgccttcgcggtcgagccgttcaagggcaaccccgccgcagtgtgc 336 |||||||||||||| || ||||||| ||||||||||||||||||||||||||| || ||| Sbjct: 104 tacgccgtggtggacgcgttcgcggccgagccgttcaagggcaaccccgccgccgtatgc 163 Query: 337 ctcctcaa---ggaggaggacgccgcgtccgcggacgagcggtggatgcagtccgtcgcc 393 ||||| | |||||| | ||| ||| | ||||||||||||||||||||||||||||| Sbjct: 164 ctcctggaaggggaggatgccgcggcggcggcggacgagcggtggatgcagtccgtcgca 223 Query: 394 gccgagttcaacctctcccagaccgccttcctcgtccgcga---ctcctcctccgccggt 450 |||||||||||||||||| |||||||||||||| ||||||| |||||||||||||| Sbjct: 224 gccgagttcaacctctccgagaccgccttcctcatccgcgacccctcctcctccgccgcc 283 Query: 451 gacgc---ctccaccccgcggttccacctccgctggttcactcccgttgccgaggtcaat 507 | ||| | || |||||||||||| ||||||||||||||| ||||| |||||||| ||| Sbjct: 284 gccgccgacgccgccccgcggttccgcctccgctggttcacccccgtcgccgaggtgaat 343 Query: 508 ctctgcgggcacgcgaaattggcctccgcccacttcctcttcacaaccgt 557 |||||||| ||||||| |||| |||||||||||||||||||| ||||| Sbjct: 344 ctctgcggccacgcgacgctggcatccgcccacttcctcttcaccaccgt 393 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 188 bits (95), Expect = 3e-44 Identities = 197/229 (86%), Gaps = 9/229 (3%) Strand = Plus / Minus Query: 285 ggtggatgccttcgcggtcgagccgttcaagggcaaccccgccgcagtgtgcctcctcaa 344 |||||| || ||||||| ||||||||||||||||||||||||||| || |||||||| | Sbjct: 9116217 ggtggacgcgttcgcggccgagccgttcaagggcaaccccgccgccgtatgcctcctgga 9116158 Query: 345 ---ggaggaggacgccgcgtccgcggacgagcggtggatgcagtccgtcgccgccgagtt 401 |||||| | ||| ||| | ||||||||||||||||||||||||||||| |||||||| Sbjct: 9116157 aggggaggatgccgcggcggcggcggacgagcggtggatgcagtccgtcgcagccgagtt 9116098 Query: 402 caacctctcccagaccgccttcctcgtccgcga---ctcctcctccgccggtgacgc--- 455 |||||||||| |||||||||||||| ||||||| |||||||||||||| | ||| Sbjct: 9116097 caacctctccgagaccgccttcctcatccgcgacccctcctcctccgccgccgccgccga 9116038 Query: 456 ctccaccccgcggttccacctccgctggttcactcccgttgccgaggtc 504 | || |||||||||||| ||||||||||||||| ||||| ||||||||| Sbjct: 9116037 cgccgccccgcggttccgcctccgctggttcacccccgtcgccgaggtc 9115989 Score = 77.8 bits (39), Expect = 7e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 666 gaagctgttcatcgagttggatttccccatgattgatctcgtggagt 712 |||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 9115722 gaagctgttcatcgagctggatttccccatgatcgatctcgtggagt 9115676 >dbj|AP001080.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0499C11 Length = 151369 Score = 188 bits (95), Expect = 3e-44 Identities = 197/229 (86%), Gaps = 9/229 (3%) Strand = Plus / Minus Query: 285 ggtggatgccttcgcggtcgagccgttcaagggcaaccccgccgcagtgtgcctcctcaa 344 |||||| || ||||||| ||||||||||||||||||||||||||| || |||||||| | Sbjct: 145224 ggtggacgcgttcgcggccgagccgttcaagggcaaccccgccgccgtatgcctcctgga 145165 Query: 345 ---ggaggaggacgccgcgtccgcggacgagcggtggatgcagtccgtcgccgccgagtt 401 |||||| | ||| ||| | ||||||||||||||||||||||||||||| |||||||| Sbjct: 145164 aggggaggatgccgcggcggcggcggacgagcggtggatgcagtccgtcgcagccgagtt 145105 Query: 402 caacctctcccagaccgccttcctcgtccgcga---ctcctcctccgccggtgacgc--- 455 |||||||||| |||||||||||||| ||||||| |||||||||||||| | ||| Sbjct: 145104 caacctctccgagaccgccttcctcatccgcgacccctcctcctccgccgccgccgccga 145045 Query: 456 ctccaccccgcggttccacctccgctggttcactcccgttgccgaggtc 504 | || |||||||||||| ||||||||||||||| ||||| ||||||||| Sbjct: 145044 cgccgccccgcggttccgcctccgctggttcacccccgtcgccgaggtc 144996 Score = 77.8 bits (39), Expect = 7e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 666 gaagctgttcatcgagttggatttccccatgattgatctcgtggagt 712 |||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 144729 gaagctgttcatcgagctggatttccccatgatcgatctcgtggagt 144683 >dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0011D01 Length = 168655 Score = 188 bits (95), Expect = 3e-44 Identities = 197/229 (86%), Gaps = 9/229 (3%) Strand = Plus / Minus Query: 285 ggtggatgccttcgcggtcgagccgttcaagggcaaccccgccgcagtgtgcctcctcaa 344 |||||| || ||||||| ||||||||||||||||||||||||||| || |||||||| | Sbjct: 16599 ggtggacgcgttcgcggccgagccgttcaagggcaaccccgccgccgtatgcctcctgga 16540 Query: 345 ---ggaggaggacgccgcgtccgcggacgagcggtggatgcagtccgtcgccgccgagtt 401 |||||| | ||| ||| | ||||||||||||||||||||||||||||| |||||||| Sbjct: 16539 aggggaggatgccgcggcggcggcggacgagcggtggatgcagtccgtcgcagccgagtt 16480 Query: 402 caacctctcccagaccgccttcctcgtccgcga---ctcctcctccgccggtgacgc--- 455 |||||||||| |||||||||||||| ||||||| |||||||||||||| | ||| Sbjct: 16479 caacctctccgagaccgccttcctcatccgcgacccctcctcctccgccgccgccgccga 16420 Query: 456 ctccaccccgcggttccacctccgctggttcactcccgttgccgaggtc 504 | || |||||||||||| ||||||||||||||| ||||| ||||||||| Sbjct: 16419 cgccgccccgcggttccgcctccgctggttcacccccgtcgccgaggtc 16371 Score = 77.8 bits (39), Expect = 7e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 666 gaagctgttcatcgagttggatttccccatgattgatctcgtggagt 712 |||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 16104 gaagctgttcatcgagctggatttccccatgatcgatctcgtggagt 16058