BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst010i02
         (551 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|AM502849.1| Hordeum vulgare subsp. vulgare mRNA for beta tub...   309   6e-81
emb|Y09741.1|HVBTUBI Hordeum vulgare mRNA for beta-tubulin 1          309   6e-81
ref|NM_001051100.1| Oryza sativa (japonica cultivar-group) Os01g...   293   4e-76
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...   293   4e-76
dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic D...   293   4e-76

>emb|AM502849.1| Hordeum vulgare subsp. vulgare mRNA for beta tubulin 1 (tub1 gene)
          Length = 1646

 Score =  309 bits (156), Expect = 6e-81
 Identities = 185/194 (95%), Gaps = 3/194 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgttccggagggtgagcgagcagttcaccgccatgttcaggaggaaggctttcttgcac 60
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| 
Sbjct: 1212 atgttccggagggtgagcgagcagttcactgccatgttcaggaggaaggctttcttgcat 1271

                                                                        
Query: 61   tggtacaccggcgaaggcatggacgagatggagttcaccgaggcagagagcaacatgaac 120
            |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1272 tggtacactggcgaaggcatggacgagatggagttcaccgaggccgagagcaacatgaac 1331

                                                                        
Query: 121  gacctcgtctcagagtaccagcagtaccaggatgcgaccgccgacgaggaggagggcgag 180
            ||||||||||||||||||||||||||||||||||| || ||||||   ||||||||||||
Sbjct: 1332 gacctcgtctcagagtaccagcagtaccaggatgccactgccgac---gaggagggcgag 1388

                          
Query: 181  tacgaggatgagga 194
            ||||||||||||||
Sbjct: 1389 tacgaggatgagga 1402


>emb|Y09741.1|HVBTUBI Hordeum vulgare mRNA for beta-tubulin 1
          Length = 1646

 Score =  309 bits (156), Expect = 6e-81
 Identities = 185/194 (95%), Gaps = 3/194 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgttccggagggtgagcgagcagttcaccgccatgttcaggaggaaggctttcttgcac 60
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| 
Sbjct: 1212 atgttccggagggtgagcgagcagttcactgccatgttcaggaggaaggctttcttgcat 1271

                                                                        
Query: 61   tggtacaccggcgaaggcatggacgagatggagttcaccgaggcagagagcaacatgaac 120
            |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1272 tggtacactggcgaaggcatggacgagatggagttcaccgaggccgagagcaacatgaac 1331

                                                                        
Query: 121  gacctcgtctcagagtaccagcagtaccaggatgcgaccgccgacgaggaggagggcgag 180
            ||||||||||||||||||||||||||||||||||| || ||||||   ||||||||||||
Sbjct: 1332 gacctcgtctcagagtaccagcagtaccaggatgccactgccgac---gaggagggcgag 1388

                          
Query: 181  tacgaggatgagga 194
            ||||||||||||||
Sbjct: 1389 tacgaggatgagga 1402


>ref|NM_001051100.1| Oryza sativa (japonica cultivar-group) Os01g0805900 (Os01g0805900)
            mRNA, complete cds
          Length = 1799

 Score =  293 bits (148), Expect = 4e-76
 Identities = 183/194 (94%), Gaps = 3/194 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgttccggagggtgagcgagcagttcaccgccatgttcaggaggaaggctttcttgcac 60
            ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 1204 atgttccggagggtgagcgagcagttcactgctatgttcaggaggaaggctttcttgcac 1263

                                                                        
Query: 61   tggtacaccggcgaaggcatggacgagatggagttcaccgaggcagagagcaacatgaac 120
            |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1264 tggtacactggcgaaggcatggacgagatggagttcaccgaggcagagagcaacatgaac 1323

                                                                        
Query: 121  gacctcgtctcagagtaccagcagtaccaggatgcgaccgccgacgaggaggagggcgag 180
            ||||| ||||| ||||||||||||||||||||||| |||||   ||| ||||||||||||
Sbjct: 1324 gaccttgtctctgagtaccagcagtaccaggatgccaccgc---cgatgaggagggcgag 1380

                          
Query: 181  tacgaggatgagga 194
            |||||||| |||||
Sbjct: 1381 tacgaggacgagga 1394


>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score =  293 bits (148), Expect = 4e-76
 Identities = 183/194 (94%), Gaps = 3/194 (1%)
 Strand = Plus / Plus

                                                                            
Query: 1        atgttccggagggtgagcgagcagttcaccgccatgttcaggaggaaggctttcttgcac 60
                ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 34164408 atgttccggagggtgagcgagcagttcactgctatgttcaggaggaaggctttcttgcac 34164467

                                                                            
Query: 61       tggtacaccggcgaaggcatggacgagatggagttcaccgaggcagagagcaacatgaac 120
                |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34164468 tggtacactggcgaaggcatggacgagatggagttcaccgaggcagagagcaacatgaac 34164527

                                                                            
Query: 121      gacctcgtctcagagtaccagcagtaccaggatgcgaccgccgacgaggaggagggcgag 180
                ||||| ||||| ||||||||||||||||||||||| |||||   ||| ||||||||||||
Sbjct: 34164528 gaccttgtctctgagtaccagcagtaccaggatgccaccgc---cgatgaggagggcgag 34164584

                              
Query: 181      tacgaggatgagga 194
                |||||||| |||||
Sbjct: 34164585 tacgaggacgagga 34164598



 Score =  262 bits (132), Expect = 1e-66
 Identities = 153/160 (95%)
 Strand = Plus / Minus

                                                                            
Query: 13       gtgagcgagcagttcaccgccatgttcaggaggaaggctttcttgcactggtacaccggc 72
                |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 10097962 gtgagcgagcagttcaccgccatgttcaggaggaaggccttcttgcattggtacaccggc 10097903

                                                                            
Query: 73       gaaggcatggacgagatggagttcaccgaggcagagagcaacatgaacgacctcgtctca 132
                || ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| 
Sbjct: 10097902 gagggcatggacgagatggagttcaccgaggccgagagcaacatgaacgaccttgtctcc 10097843

                                                        
Query: 133      gagtaccagcagtaccaggatgcgaccgccgacgaggagg 172
                ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 10097842 gagtaccagcagtaccaggatgccaccgccgacgaggagg 10097803


>dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0034E02
          Length = 165497

 Score =  293 bits (148), Expect = 4e-76
 Identities = 183/194 (94%), Gaps = 3/194 (1%)
 Strand = Plus / Plus

                                                                          
Query: 1      atgttccggagggtgagcgagcagttcaccgccatgttcaggaggaaggctttcttgcac 60
              ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 160886 atgttccggagggtgagcgagcagttcactgctatgttcaggaggaaggctttcttgcac 160945

                                                                          
Query: 61     tggtacaccggcgaaggcatggacgagatggagttcaccgaggcagagagcaacatgaac 120
              |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160946 tggtacactggcgaaggcatggacgagatggagttcaccgaggcagagagcaacatgaac 161005

                                                                          
Query: 121    gacctcgtctcagagtaccagcagtaccaggatgcgaccgccgacgaggaggagggcgag 180
              ||||| ||||| ||||||||||||||||||||||| |||||   ||| ||||||||||||
Sbjct: 161006 gaccttgtctctgagtaccagcagtaccaggatgccaccgc---cgatgaggagggcgag 161062

                            
Query: 181    tacgaggatgagga 194
              |||||||| |||||
Sbjct: 161063 tacgaggacgagga 161076